Experiment: LB_noSalt with Zinc 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS25480 and QEN71_RS25485 are separated by 32 nucleotides QEN71_RS25485 and QEN71_RS25490 are separated by 733 nucleotides QEN71_RS25490 and QEN71_RS25495 are separated by 141 nucleotides QEN71_RS25495 and QEN71_RS25500 are separated by 6 nucleotides
QEN71_RS25480: QEN71_RS25480 - hypothetical protein, at 5,669,348 to 5,669,608
_RS25480
QEN71_RS25485: QEN71_RS25485 - ATP-binding protein, at 5,669,641 to 5,669,835
_RS25485
QEN71_RS25490: QEN71_RS25490 - Imm72 family immunity protein, at 5,670,569 to 5,670,934
_RS25490
QEN71_RS25495: QEN71_RS25495 - IS21-like element helper ATPase IstB, at 5,671,076 to 5,671,864
_RS25495
QEN71_RS25500: QEN71_RS25500 - IS21 family transposase, at 5,671,871 to 5,673,394
_RS25500
Position (kb) 5670
5671 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5669.585 kb on + strand at 5669.585 kb on + strand at 5669.585 kb on + strand at 5669.585 kb on + strand at 5669.586 kb on - strand at 5669.700 kb on + strand, within QEN71_RS25485 at 5669.839 kb on - strand at 5669.839 kb on - strand at 5669.839 kb on - strand at 5669.892 kb on - strand at 5669.969 kb on + strand at 5669.969 kb on + strand at 5669.969 kb on + strand at 5669.969 kb on + strand at 5669.970 kb on - strand at 5669.970 kb on - strand at 5670.032 kb on + strand at 5670.032 kb on + strand at 5670.033 kb on - strand at 5670.121 kb on + strand at 5670.138 kb on + strand at 5670.138 kb on + strand at 5670.138 kb on + strand at 5670.139 kb on - strand at 5670.139 kb on - strand at 5670.141 kb on + strand at 5670.141 kb on + strand at 5670.141 kb on + strand at 5670.141 kb on + strand at 5670.142 kb on - strand at 5670.142 kb on - strand at 5670.142 kb on - strand at 5670.142 kb on - strand at 5670.142 kb on - strand at 5670.268 kb on + strand at 5670.317 kb on - strand at 5670.323 kb on + strand at 5670.323 kb on + strand at 5670.324 kb on - strand at 5670.324 kb on - strand at 5670.324 kb on - strand at 5670.410 kb on + strand at 5670.443 kb on + strand at 5670.443 kb on + strand at 5670.443 kb on + strand at 5670.570 kb on + strand at 5670.570 kb on + strand at 5670.570 kb on + strand at 5670.570 kb on + strand at 5670.625 kb on + strand, within QEN71_RS25490 at 5670.687 kb on + strand, within QEN71_RS25490 at 5670.687 kb on + strand, within QEN71_RS25490 at 5670.687 kb on + strand, within QEN71_RS25490 at 5670.688 kb on - strand, within QEN71_RS25490 at 5670.795 kb on + strand, within QEN71_RS25490 at 5670.796 kb on - strand, within QEN71_RS25490 at 5670.812 kb on + strand, within QEN71_RS25490 at 5670.812 kb on + strand, within QEN71_RS25490 at 5670.813 kb on - strand, within QEN71_RS25490 at 5670.813 kb on - strand, within QEN71_RS25490 at 5670.826 kb on + strand, within QEN71_RS25490 at 5670.826 kb on + strand, within QEN71_RS25490 at 5670.826 kb on + strand, within QEN71_RS25490 at 5670.827 kb on - strand, within QEN71_RS25490 at 5670.827 kb on - strand, within QEN71_RS25490 at 5670.827 kb on - strand, within QEN71_RS25490 at 5670.827 kb on - strand, within QEN71_RS25490 at 5670.858 kb on + strand, within QEN71_RS25490 at 5670.858 kb on + strand, within QEN71_RS25490 at 5670.858 kb on + strand, within QEN71_RS25490 at 5670.858 kb on + strand, within QEN71_RS25490 at 5670.859 kb on - strand, within QEN71_RS25490 at 5670.859 kb on - strand, within QEN71_RS25490 at 5670.897 kb on + strand, within QEN71_RS25490 at 5670.897 kb on + strand, within QEN71_RS25490 at 5670.897 kb on + strand, within QEN71_RS25490 at 5670.898 kb on - strand at 5670.898 kb on - strand at 5670.939 kb on + strand at 5670.939 kb on + strand at 5670.939 kb on + strand at 5670.939 kb on + strand at 5670.940 kb on - strand at 5670.940 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB_noSalt with Zinc 0.5 mM remove 5,669,585 + -0.9 5,669,585 + -0.8 5,669,585 + +0.6 5,669,585 + -0.6 5,669,586 - +0.4 5,669,700 + QEN71_RS25485 0.30 +0.3 5,669,839 - -1.5 5,669,839 - -0.2 5,669,839 - -0.5 5,669,892 - -1.7 5,669,969 + -0.9 5,669,969 + -0.4 5,669,969 + +0.0 5,669,969 + +0.2 5,669,970 - -0.1 5,669,970 - +0.9 5,670,032 + -1.4 5,670,032 + -0.7 5,670,033 - -0.3 5,670,121 + -0.2 5,670,138 + -1.9 5,670,138 + -0.9 5,670,138 + -0.3 5,670,139 - -0.0 5,670,139 - +0.2 5,670,141 + +0.2 5,670,141 + +0.5 5,670,141 + -1.2 5,670,141 + -0.4 5,670,142 - +0.4 5,670,142 - -0.1 5,670,142 - +0.6 5,670,142 - -0.5 5,670,142 - -0.2 5,670,268 + +0.8 5,670,317 - +0.8 5,670,323 + +0.9 5,670,323 + +0.4 5,670,324 - +0.7 5,670,324 - -0.1 5,670,324 - +0.1 5,670,410 + -0.9 5,670,443 + +0.3 5,670,443 + -0.5 5,670,443 + -1.9 5,670,570 + +0.3 5,670,570 + +0.0 5,670,570 + -0.6 5,670,570 + +2.0 5,670,625 + QEN71_RS25490 0.15 -0.5 5,670,687 + QEN71_RS25490 0.32 +0.6 5,670,687 + QEN71_RS25490 0.32 +1.5 5,670,687 + QEN71_RS25490 0.32 -0.6 5,670,688 - QEN71_RS25490 0.33 -0.6 5,670,795 + QEN71_RS25490 0.62 +0.2 5,670,796 - QEN71_RS25490 0.62 -0.3 5,670,812 + QEN71_RS25490 0.66 -0.8 5,670,812 + QEN71_RS25490 0.66 +0.5 5,670,813 - QEN71_RS25490 0.67 -0.6 5,670,813 - QEN71_RS25490 0.67 +1.1 5,670,826 + QEN71_RS25490 0.70 -0.5 5,670,826 + QEN71_RS25490 0.70 -0.2 5,670,826 + QEN71_RS25490 0.70 +1.0 5,670,827 - QEN71_RS25490 0.70 -1.4 5,670,827 - QEN71_RS25490 0.70 -0.4 5,670,827 - QEN71_RS25490 0.70 +1.3 5,670,827 - QEN71_RS25490 0.70 -1.2 5,670,858 + QEN71_RS25490 0.79 +0.1 5,670,858 + QEN71_RS25490 0.79 -0.5 5,670,858 + QEN71_RS25490 0.79 -0.2 5,670,858 + QEN71_RS25490 0.79 +0.7 5,670,859 - QEN71_RS25490 0.79 +0.2 5,670,859 - QEN71_RS25490 0.79 -0.4 5,670,897 + QEN71_RS25490 0.90 -0.4 5,670,897 + QEN71_RS25490 0.90 +0.2 5,670,897 + QEN71_RS25490 0.90 -0.2 5,670,898 - -0.7 5,670,898 - -0.5 5,670,939 + -1.2 5,670,939 + -0.1 5,670,939 + -0.6 5,670,939 + +0.2 5,670,940 - -0.1 5,670,940 - -0.2
Or see this region's nucleotide sequence