Strain Fitness in Paraburkholderia sabiae LMG 24235 around QEN71_RS23370

Experiment: LB_noSalt with Zinc 0.5 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntQEN71_RS23365 and QEN71_RS23370 overlap by 4 nucleotidesQEN71_RS23370 and QEN71_RS23375 are separated by 38 nucleotides QEN71_RS23365: QEN71_RS23365 - arginine N-succinyltransferase, at 5,204,204 to 5,205,229 _RS23365 QEN71_RS23370: QEN71_RS23370 - arginine/ornithine succinyltransferase subunit alpha, at 5,205,226 to 5,206,278 _RS23370 QEN71_RS23375: QEN71_RS23375 - aspartate aminotransferase family protein, at 5,206,317 to 5,207,546 _RS23375 Position (kb) 5205 5206 5207Strain fitness (log2 ratio) -1 0 1at 5205.414 kb on - strand, within QEN71_RS23370at 5205.414 kb on - strand, within QEN71_RS23370at 5205.523 kb on - strand, within QEN71_RS23370at 5205.648 kb on - strand, within QEN71_RS23370at 5205.837 kb on - strand, within QEN71_RS23370at 5205.837 kb on - strand, within QEN71_RS23370at 5205.837 kb on - strand, within QEN71_RS23370at 5205.900 kb on - strand, within QEN71_RS23370at 5205.900 kb on - strand, within QEN71_RS23370at 5206.017 kb on - strand, within QEN71_RS23370at 5206.017 kb on - strand, within QEN71_RS23370at 5206.104 kb on - strand, within QEN71_RS23370

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Per-strain Table

Position Strand Gene LocusTag Fraction LB_noSalt with Zinc 0.5 mM
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5,205,414 - QEN71_RS23370 0.18 -0.1
5,205,414 - QEN71_RS23370 0.18 -1.3
5,205,523 - QEN71_RS23370 0.28 -1.5
5,205,648 - QEN71_RS23370 0.40 +1.5
5,205,837 - QEN71_RS23370 0.58 -0.1
5,205,837 - QEN71_RS23370 0.58 -0.1
5,205,837 - QEN71_RS23370 0.58 -0.8
5,205,900 - QEN71_RS23370 0.64 -0.8
5,205,900 - QEN71_RS23370 0.64 -0.4
5,206,017 - QEN71_RS23370 0.75 +0.2
5,206,017 - QEN71_RS23370 0.75 +0.6
5,206,104 - QEN71_RS23370 0.83 -1.1

Or see this region's nucleotide sequence