Experiment: LB_noSalt with Zinc 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS23170 and QEN71_RS23175 are separated by 9 nucleotides QEN71_RS23175 and QEN71_RS23180 are separated by 127 nucleotides QEN71_RS23180 and QEN71_RS23185 are separated by 24 nucleotides
QEN71_RS23170: QEN71_RS23170 - EAL domain-containing protein, at 5,150,287 to 5,151,561
_RS23170
QEN71_RS23175: QEN71_RS23175 - alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB, at 5,151,571 to 5,151,978
_RS23175
QEN71_RS23180: QEN71_RS23180 - VC0807 family protein, at 5,152,106 to 5,152,765
_RS23180
QEN71_RS23185: QEN71_RS23185 - exodeoxyribonuclease V subunit alpha, at 5,152,790 to 5,154,835
_RS23185
Position (kb) 5151
5152 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 5151.028 kb on + strand, within QEN71_RS23170 at 5151.028 kb on + strand, within QEN71_RS23170 at 5151.057 kb on - strand, within QEN71_RS23170 at 5151.057 kb on - strand, within QEN71_RS23170 at 5151.118 kb on + strand, within QEN71_RS23170 at 5151.118 kb on + strand, within QEN71_RS23170 at 5151.118 kb on + strand, within QEN71_RS23170 at 5151.119 kb on - strand, within QEN71_RS23170 at 5151.119 kb on - strand, within QEN71_RS23170 at 5151.119 kb on - strand, within QEN71_RS23170 at 5151.139 kb on + strand, within QEN71_RS23170 at 5151.140 kb on - strand, within QEN71_RS23170 at 5151.196 kb on + strand, within QEN71_RS23170 at 5151.196 kb on + strand, within QEN71_RS23170 at 5151.196 kb on + strand, within QEN71_RS23170 at 5151.196 kb on + strand, within QEN71_RS23170 at 5151.196 kb on + strand, within QEN71_RS23170 at 5151.196 kb on + strand, within QEN71_RS23170 at 5151.196 kb on + strand, within QEN71_RS23170 at 5151.196 kb on + strand, within QEN71_RS23170 at 5151.197 kb on - strand, within QEN71_RS23170 at 5151.197 kb on - strand, within QEN71_RS23170 at 5151.197 kb on - strand, within QEN71_RS23170 at 5151.197 kb on - strand, within QEN71_RS23170 at 5151.197 kb on - strand, within QEN71_RS23170 at 5151.469 kb on + strand at 5151.469 kb on + strand at 5151.469 kb on + strand at 5151.469 kb on + strand at 5151.469 kb on + strand at 5151.469 kb on + strand at 5151.469 kb on + strand at 5151.469 kb on + strand at 5151.469 kb on + strand at 5151.470 kb on - strand at 5151.470 kb on - strand at 5151.889 kb on + strand, within QEN71_RS23175 at 5151.889 kb on + strand, within QEN71_RS23175 at 5151.890 kb on - strand, within QEN71_RS23175 at 5151.890 kb on - strand, within QEN71_RS23175 at 5152.187 kb on + strand, within QEN71_RS23180 at 5152.188 kb on - strand, within QEN71_RS23180 at 5152.236 kb on + strand, within QEN71_RS23180 at 5152.236 kb on + strand, within QEN71_RS23180 at 5152.436 kb on + strand, within QEN71_RS23180 at 5152.437 kb on - strand, within QEN71_RS23180 at 5152.437 kb on - strand, within QEN71_RS23180 at 5152.437 kb on - strand, within QEN71_RS23180 at 5152.492 kb on + strand, within QEN71_RS23180 at 5152.492 kb on + strand, within QEN71_RS23180 at 5152.493 kb on - strand, within QEN71_RS23180 at 5152.685 kb on + strand, within QEN71_RS23180
Per-strain Table
Position Strand Gene LocusTag Fraction LB_noSalt with Zinc 0.5 mM remove 5,151,028 + QEN71_RS23170 0.58 -2.1 5,151,028 + QEN71_RS23170 0.58 -1.5 5,151,057 - QEN71_RS23170 0.60 -0.2 5,151,057 - QEN71_RS23170 0.60 -0.4 5,151,118 + QEN71_RS23170 0.65 +0.2 5,151,118 + QEN71_RS23170 0.65 -0.1 5,151,118 + QEN71_RS23170 0.65 +1.2 5,151,119 - QEN71_RS23170 0.65 +0.3 5,151,119 - QEN71_RS23170 0.65 +1.4 5,151,119 - QEN71_RS23170 0.65 -1.1 5,151,139 + QEN71_RS23170 0.67 -2.4 5,151,140 - QEN71_RS23170 0.67 +0.7 5,151,196 + QEN71_RS23170 0.71 +1.3 5,151,196 + QEN71_RS23170 0.71 +0.2 5,151,196 + QEN71_RS23170 0.71 +0.4 5,151,196 + QEN71_RS23170 0.71 +0.2 5,151,196 + QEN71_RS23170 0.71 -0.8 5,151,196 + QEN71_RS23170 0.71 -0.5 5,151,196 + QEN71_RS23170 0.71 -0.4 5,151,196 + QEN71_RS23170 0.71 -0.6 5,151,197 - QEN71_RS23170 0.71 -0.6 5,151,197 - QEN71_RS23170 0.71 -0.0 5,151,197 - QEN71_RS23170 0.71 +0.4 5,151,197 - QEN71_RS23170 0.71 -1.4 5,151,197 - QEN71_RS23170 0.71 -0.4 5,151,469 + -0.4 5,151,469 + -0.3 5,151,469 + -2.2 5,151,469 + -0.4 5,151,469 + -0.6 5,151,469 + +0.1 5,151,469 + +0.2 5,151,469 + -2.4 5,151,469 + -0.2 5,151,470 - -1.9 5,151,470 - +2.8 5,151,889 + QEN71_RS23175 0.78 -1.0 5,151,889 + QEN71_RS23175 0.78 -1.0 5,151,890 - QEN71_RS23175 0.78 -2.1 5,151,890 - QEN71_RS23175 0.78 -1.0 5,152,187 + QEN71_RS23180 0.12 +0.0 5,152,188 - QEN71_RS23180 0.12 -0.3 5,152,236 + QEN71_RS23180 0.20 +0.5 5,152,236 + QEN71_RS23180 0.20 -0.8 5,152,436 + QEN71_RS23180 0.50 -0.8 5,152,437 - QEN71_RS23180 0.50 -0.1 5,152,437 - QEN71_RS23180 0.50 -0.2 5,152,437 - QEN71_RS23180 0.50 -1.1 5,152,492 + QEN71_RS23180 0.58 -0.9 5,152,492 + QEN71_RS23180 0.58 -0.3 5,152,493 - QEN71_RS23180 0.59 -0.3 5,152,685 + QEN71_RS23180 0.88 +0.7
Or see this region's nucleotide sequence