Experiment: LB_noSalt with Zinc 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS21040 and QEN71_RS21045 are separated by 211 nucleotides QEN71_RS21045 and QEN71_RS21050 are separated by 106 nucleotides QEN71_RS21050 and QEN71_RS21055 are separated by 39 nucleotides
QEN71_RS21040: QEN71_RS21040 - response regulator, at 4,668,411 to 4,668,794
_RS21040
QEN71_RS21045: QEN71_RS21045 - BON domain-containing protein, at 4,669,006 to 4,669,395
_RS21045
QEN71_RS21050: QEN71_RS21050 - DUF3331 domain-containing protein, at 4,669,502 to 4,669,951
_RS21050
QEN71_RS21055: QEN71_RS21055 - amidase family protein, at 4,669,991 to 4,671,391
_RS21055
Position (kb)
4669
4670 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 4668.663 kb on + strand, within QEN71_RS21040 at 4668.663 kb on + strand, within QEN71_RS21040 at 4668.664 kb on - strand, within QEN71_RS21040 at 4668.664 kb on - strand, within QEN71_RS21040 at 4668.664 kb on - strand, within QEN71_RS21040 at 4668.916 kb on + strand at 4668.916 kb on + strand at 4668.917 kb on - strand at 4668.931 kb on + strand at 4669.471 kb on + strand at 4669.472 kb on - strand at 4669.473 kb on + strand at 4669.473 kb on + strand at 4669.473 kb on + strand at 4669.496 kb on - strand at 4669.496 kb on - strand at 4669.521 kb on + strand at 4669.521 kb on + strand at 4669.534 kb on + strand at 4669.687 kb on + strand, within QEN71_RS21050 at 4669.688 kb on - strand, within QEN71_RS21050 at 4669.771 kb on - strand, within QEN71_RS21050 at 4669.875 kb on + strand, within QEN71_RS21050 at 4669.875 kb on + strand, within QEN71_RS21050 at 4670.001 kb on + strand at 4670.001 kb on + strand at 4670.002 kb on - strand at 4670.543 kb on + strand, within QEN71_RS21055 at 4670.727 kb on - strand, within QEN71_RS21055 at 4670.727 kb on - strand, within QEN71_RS21055 at 4670.727 kb on - strand, within QEN71_RS21055
Per-strain Table
Position Strand Gene LocusTag Fraction LB_noSalt with Zinc 0.5 mM remove 4,668,663 + QEN71_RS21040 0.66 +3.2 4,668,663 + QEN71_RS21040 0.66 +3.2 4,668,664 - QEN71_RS21040 0.66 -0.4 4,668,664 - QEN71_RS21040 0.66 -1.3 4,668,664 - QEN71_RS21040 0.66 +0.3 4,668,916 + +3.4 4,668,916 + +3.2 4,668,917 - -1.0 4,668,931 + +3.2 4,669,471 + +1.4 4,669,472 - -0.1 4,669,473 + +2.5 4,669,473 + +2.0 4,669,473 + +1.6 4,669,496 - +2.9 4,669,496 - +0.2 4,669,521 + +0.9 4,669,521 + +0.1 4,669,534 + -1.0 4,669,687 + QEN71_RS21050 0.41 -1.2 4,669,688 - QEN71_RS21050 0.41 -1.1 4,669,771 - QEN71_RS21050 0.60 -0.0 4,669,875 + QEN71_RS21050 0.83 -3.1 4,669,875 + QEN71_RS21050 0.83 -1.0 4,670,001 + -0.6 4,670,001 + -0.6 4,670,002 - +0.2 4,670,543 + QEN71_RS21055 0.39 +2.0 4,670,727 - QEN71_RS21055 0.53 +0.2 4,670,727 - QEN71_RS21055 0.53 +0.6 4,670,727 - QEN71_RS21055 0.53 +0.7
Or see this region's nucleotide sequence