Experiment: LB_noSalt with Zinc 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS20875 and QEN71_RS20880 are separated by 88 nucleotides QEN71_RS20880 and QEN71_RS20885 are separated by 85 nucleotides QEN71_RS20885 and QEN71_RS20890 are separated by 15 nucleotides
QEN71_RS20875: QEN71_RS20875 - chloride channel protein, at 4,628,173 to 4,629,480
_RS20875
QEN71_RS20880: QEN71_RS20880 - TetR/AcrR family transcriptional regulator, at 4,629,569 to 4,630,159
_RS20880
QEN71_RS20885: QEN71_RS20885 - cysteine hydrolase, at 4,630,245 to 4,630,973
_RS20885
QEN71_RS20890: QEN71_RS20890 - SulP family inorganic anion transporter, at 4,630,989 to 4,633,112
_RS20890
Position (kb) 4629
4630
4631 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 4628.617 kb on + strand, within QEN71_RS20875 at 4628.617 kb on + strand, within QEN71_RS20875 at 4628.836 kb on + strand, within QEN71_RS20875 at 4628.837 kb on - strand, within QEN71_RS20875 at 4628.837 kb on - strand, within QEN71_RS20875 at 4628.842 kb on + strand, within QEN71_RS20875 at 4628.843 kb on - strand, within QEN71_RS20875 at 4629.072 kb on + strand, within QEN71_RS20875 at 4629.073 kb on - strand, within QEN71_RS20875 at 4629.073 kb on - strand, within QEN71_RS20875 at 4629.139 kb on + strand, within QEN71_RS20875 at 4629.140 kb on - strand, within QEN71_RS20875 at 4629.175 kb on + strand, within QEN71_RS20875 at 4629.176 kb on - strand, within QEN71_RS20875 at 4629.304 kb on + strand, within QEN71_RS20875 at 4629.304 kb on + strand, within QEN71_RS20875 at 4629.446 kb on - strand at 4629.537 kb on - strand at 4629.704 kb on + strand, within QEN71_RS20880 at 4629.704 kb on + strand, within QEN71_RS20880 at 4629.705 kb on - strand, within QEN71_RS20880 at 4629.705 kb on - strand, within QEN71_RS20880 at 4629.710 kb on + strand, within QEN71_RS20880 at 4630.067 kb on + strand, within QEN71_RS20880 at 4630.067 kb on + strand, within QEN71_RS20880 at 4630.220 kb on + strand at 4630.221 kb on - strand at 4630.240 kb on + strand at 4630.241 kb on - strand at 4630.244 kb on + strand at 4630.244 kb on + strand at 4630.245 kb on - strand at 4630.439 kb on + strand, within QEN71_RS20885 at 4630.440 kb on - strand, within QEN71_RS20885 at 4630.440 kb on - strand, within QEN71_RS20885 at 4630.512 kb on + strand, within QEN71_RS20885 at 4630.512 kb on + strand, within QEN71_RS20885 at 4630.512 kb on + strand, within QEN71_RS20885 at 4630.516 kb on - strand, within QEN71_RS20885 at 4630.518 kb on + strand, within QEN71_RS20885 at 4630.610 kb on - strand, within QEN71_RS20885 at 4630.650 kb on + strand, within QEN71_RS20885 at 4630.650 kb on + strand, within QEN71_RS20885 at 4630.651 kb on - strand, within QEN71_RS20885 at 4630.651 kb on - strand, within QEN71_RS20885 at 4630.651 kb on - strand, within QEN71_RS20885 at 4630.651 kb on - strand, within QEN71_RS20885 at 4630.651 kb on - strand, within QEN71_RS20885 at 4630.704 kb on + strand, within QEN71_RS20885
Per-strain Table
Position Strand Gene LocusTag Fraction LB_noSalt with Zinc 0.5 mM remove 4,628,617 + QEN71_RS20875 0.34 +0.2 4,628,617 + QEN71_RS20875 0.34 -0.6 4,628,836 + QEN71_RS20875 0.51 +0.1 4,628,837 - QEN71_RS20875 0.51 -0.0 4,628,837 - QEN71_RS20875 0.51 -0.5 4,628,842 + QEN71_RS20875 0.51 -0.6 4,628,843 - QEN71_RS20875 0.51 +0.9 4,629,072 + QEN71_RS20875 0.69 -1.3 4,629,073 - QEN71_RS20875 0.69 -0.2 4,629,073 - QEN71_RS20875 0.69 +0.2 4,629,139 + QEN71_RS20875 0.74 -0.0 4,629,140 - QEN71_RS20875 0.74 +1.9 4,629,175 + QEN71_RS20875 0.77 +0.7 4,629,176 - QEN71_RS20875 0.77 -0.0 4,629,304 + QEN71_RS20875 0.86 -0.5 4,629,304 + QEN71_RS20875 0.86 -1.1 4,629,446 - -0.2 4,629,537 - +0.5 4,629,704 + QEN71_RS20880 0.23 -2.7 4,629,704 + QEN71_RS20880 0.23 +0.9 4,629,705 - QEN71_RS20880 0.23 -1.1 4,629,705 - QEN71_RS20880 0.23 -0.1 4,629,710 + QEN71_RS20880 0.24 -0.5 4,630,067 + QEN71_RS20880 0.84 -1.0 4,630,067 + QEN71_RS20880 0.84 -3.3 4,630,220 + -0.2 4,630,221 - +0.2 4,630,240 + +0.1 4,630,241 - -0.3 4,630,244 + -0.4 4,630,244 + +0.8 4,630,245 - +0.1 4,630,439 + QEN71_RS20885 0.27 -0.4 4,630,440 - QEN71_RS20885 0.27 -0.1 4,630,440 - QEN71_RS20885 0.27 +0.3 4,630,512 + QEN71_RS20885 0.37 -0.9 4,630,512 + QEN71_RS20885 0.37 -0.8 4,630,512 + QEN71_RS20885 0.37 -0.2 4,630,516 - QEN71_RS20885 0.37 +0.0 4,630,518 + QEN71_RS20885 0.37 -0.1 4,630,610 - QEN71_RS20885 0.50 -0.3 4,630,650 + QEN71_RS20885 0.56 -0.8 4,630,650 + QEN71_RS20885 0.56 +1.5 4,630,651 - QEN71_RS20885 0.56 -0.1 4,630,651 - QEN71_RS20885 0.56 +0.4 4,630,651 - QEN71_RS20885 0.56 +0.6 4,630,651 - QEN71_RS20885 0.56 -2.4 4,630,651 - QEN71_RS20885 0.56 -0.4 4,630,704 + QEN71_RS20885 0.63 +0.2
Or see this region's nucleotide sequence