Experiment: LB_noSalt with Zinc 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS18625 and QEN71_RS18630 are separated by 87 nucleotides QEN71_RS18630 and QEN71_RS18635 are separated by 15 nucleotides QEN71_RS18635 and QEN71_RS18640 are separated by 509 nucleotides
QEN71_RS18625: QEN71_RS18625 - hypothetical protein, at 4,147,205 to 4,147,864
_RS18625
QEN71_RS18630: QEN71_RS18630 - hypothetical protein, at 4,147,952 to 4,148,419
_RS18630
QEN71_RS18635: QEN71_RS18635 - hypothetical protein, at 4,148,435 to 4,148,839
_RS18635
QEN71_RS18640: QEN71_RS18640 - DMT family transporter, at 4,149,349 to 4,150,293
_RS18640
Position (kb)
4148
4149 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4147.489 kb on - strand, within QEN71_RS18625 at 4147.517 kb on + strand, within QEN71_RS18625 at 4147.517 kb on + strand, within QEN71_RS18625 at 4147.517 kb on + strand, within QEN71_RS18625 at 4147.517 kb on + strand, within QEN71_RS18625 at 4147.517 kb on + strand, within QEN71_RS18625 at 4147.517 kb on + strand, within QEN71_RS18625 at 4147.518 kb on - strand, within QEN71_RS18625 at 4147.518 kb on - strand, within QEN71_RS18625 at 4147.518 kb on - strand, within QEN71_RS18625 at 4147.518 kb on - strand, within QEN71_RS18625 at 4147.518 kb on - strand, within QEN71_RS18625 at 4147.582 kb on + strand, within QEN71_RS18625 at 4147.584 kb on + strand, within QEN71_RS18625 at 4147.584 kb on + strand, within QEN71_RS18625 at 4147.584 kb on + strand, within QEN71_RS18625 at 4147.584 kb on + strand, within QEN71_RS18625 at 4147.585 kb on - strand, within QEN71_RS18625 at 4147.585 kb on - strand, within QEN71_RS18625 at 4147.700 kb on + strand, within QEN71_RS18625 at 4147.730 kb on + strand, within QEN71_RS18625 at 4147.730 kb on + strand, within QEN71_RS18625 at 4147.731 kb on - strand, within QEN71_RS18625 at 4147.756 kb on - strand, within QEN71_RS18625 at 4147.825 kb on - strand at 4147.825 kb on - strand at 4147.825 kb on - strand at 4147.825 kb on - strand at 4147.825 kb on - strand at 4147.849 kb on + strand at 4147.849 kb on + strand at 4147.862 kb on + strand at 4147.926 kb on + strand at 4147.926 kb on + strand at 4147.927 kb on - strand at 4147.931 kb on - strand at 4147.940 kb on - strand at 4147.940 kb on - strand at 4147.940 kb on - strand at 4147.940 kb on - strand at 4147.940 kb on - strand at 4147.940 kb on - strand at 4147.953 kb on + strand at 4147.986 kb on + strand at 4147.986 kb on + strand at 4147.987 kb on - strand at 4148.003 kb on + strand, within QEN71_RS18630 at 4148.043 kb on - strand, within QEN71_RS18630 at 4148.159 kb on + strand, within QEN71_RS18630 at 4148.160 kb on - strand, within QEN71_RS18630 at 4148.237 kb on + strand, within QEN71_RS18630 at 4148.238 kb on - strand, within QEN71_RS18630 at 4148.238 kb on - strand, within QEN71_RS18630 at 4148.278 kb on + strand, within QEN71_RS18630 at 4148.278 kb on + strand, within QEN71_RS18630 at 4148.279 kb on - strand, within QEN71_RS18630 at 4148.316 kb on + strand, within QEN71_RS18630 at 4148.316 kb on + strand, within QEN71_RS18630 at 4148.316 kb on + strand, within QEN71_RS18630 at 4148.316 kb on + strand, within QEN71_RS18630 at 4148.316 kb on + strand, within QEN71_RS18630 at 4148.317 kb on - strand, within QEN71_RS18630 at 4148.317 kb on - strand, within QEN71_RS18630 at 4148.317 kb on - strand, within QEN71_RS18630 at 4148.322 kb on + strand, within QEN71_RS18630 at 4148.322 kb on + strand, within QEN71_RS18630 at 4148.322 kb on + strand, within QEN71_RS18630 at 4148.322 kb on + strand, within QEN71_RS18630 at 4148.322 kb on + strand, within QEN71_RS18630 at 4148.323 kb on - strand, within QEN71_RS18630 at 4148.323 kb on - strand, within QEN71_RS18630 at 4148.323 kb on - strand, within QEN71_RS18630 at 4148.323 kb on - strand, within QEN71_RS18630 at 4148.323 kb on - strand, within QEN71_RS18630 at 4148.323 kb on - strand, within QEN71_RS18630 at 4148.323 kb on - strand, within QEN71_RS18630 at 4148.323 kb on - strand, within QEN71_RS18630 at 4148.392 kb on + strand at 4148.392 kb on + strand at 4148.392 kb on + strand at 4148.393 kb on - strand at 4148.403 kb on + strand at 4148.420 kb on - strand at 4148.436 kb on + strand at 4148.436 kb on + strand at 4148.449 kb on + strand at 4148.598 kb on - strand, within QEN71_RS18635 at 4148.669 kb on - strand, within QEN71_RS18635 at 4148.811 kb on - strand at 4148.811 kb on - strand at 4148.854 kb on - strand at 4148.859 kb on - strand at 4148.901 kb on - strand at 4148.920 kb on + strand at 4148.921 kb on - strand at 4148.921 kb on - strand at 4148.940 kb on + strand at 4148.940 kb on + strand at 4148.941 kb on - strand at 4148.941 kb on - strand at 4148.941 kb on - strand at 4148.941 kb on - strand at 4148.950 kb on + strand at 4148.951 kb on - strand at 4148.951 kb on - strand at 4149.214 kb on + strand at 4149.215 kb on - strand at 4149.215 kb on - strand at 4149.215 kb on - strand at 4149.216 kb on + strand at 4149.216 kb on + strand at 4149.217 kb on - strand at 4149.217 kb on - strand at 4149.218 kb on + strand at 4149.218 kb on + strand at 4149.218 kb on + strand at 4149.218 kb on + strand at 4149.219 kb on - strand at 4149.219 kb on - strand at 4149.227 kb on - strand at 4149.227 kb on - strand at 4149.227 kb on - strand at 4149.313 kb on - strand at 4149.350 kb on + strand at 4149.351 kb on - strand at 4149.473 kb on - strand, within QEN71_RS18640 at 4149.576 kb on - strand, within QEN71_RS18640 at 4149.576 kb on - strand, within QEN71_RS18640 at 4149.576 kb on - strand, within QEN71_RS18640 at 4149.672 kb on + strand, within QEN71_RS18640 at 4149.672 kb on + strand, within QEN71_RS18640 at 4149.672 kb on + strand, within QEN71_RS18640 at 4149.672 kb on + strand, within QEN71_RS18640 at 4149.673 kb on - strand, within QEN71_RS18640 at 4149.673 kb on - strand, within QEN71_RS18640 at 4149.731 kb on + strand, within QEN71_RS18640 at 4149.731 kb on + strand, within QEN71_RS18640 at 4149.732 kb on - strand, within QEN71_RS18640 at 4149.732 kb on - strand, within QEN71_RS18640 at 4149.732 kb on - strand, within QEN71_RS18640 at 4149.734 kb on + strand, within QEN71_RS18640 at 4149.734 kb on + strand, within QEN71_RS18640 at 4149.734 kb on + strand, within QEN71_RS18640 at 4149.735 kb on - strand, within QEN71_RS18640 at 4149.735 kb on - strand, within QEN71_RS18640
Per-strain Table
Position Strand Gene LocusTag Fraction LB_noSalt with Zinc 0.5 mM remove 4,147,489 - QEN71_RS18625 0.43 -0.2 4,147,517 + QEN71_RS18625 0.47 -0.2 4,147,517 + QEN71_RS18625 0.47 -0.2 4,147,517 + QEN71_RS18625 0.47 +0.3 4,147,517 + QEN71_RS18625 0.47 +1.2 4,147,517 + QEN71_RS18625 0.47 -0.3 4,147,517 + QEN71_RS18625 0.47 +0.4 4,147,518 - QEN71_RS18625 0.47 -0.4 4,147,518 - QEN71_RS18625 0.47 -1.2 4,147,518 - QEN71_RS18625 0.47 +0.6 4,147,518 - QEN71_RS18625 0.47 +0.8 4,147,518 - QEN71_RS18625 0.47 -0.7 4,147,582 + QEN71_RS18625 0.57 +0.6 4,147,584 + QEN71_RS18625 0.57 +0.1 4,147,584 + QEN71_RS18625 0.57 -1.4 4,147,584 + QEN71_RS18625 0.57 +1.4 4,147,584 + QEN71_RS18625 0.57 +0.9 4,147,585 - QEN71_RS18625 0.58 +0.4 4,147,585 - QEN71_RS18625 0.58 -0.2 4,147,700 + QEN71_RS18625 0.75 -0.7 4,147,730 + QEN71_RS18625 0.80 -0.8 4,147,730 + QEN71_RS18625 0.80 +0.6 4,147,731 - QEN71_RS18625 0.80 -0.2 4,147,756 - QEN71_RS18625 0.83 -1.1 4,147,825 - +0.1 4,147,825 - +0.3 4,147,825 - -0.2 4,147,825 - -1.1 4,147,825 - +0.2 4,147,849 + -0.7 4,147,849 + -0.6 4,147,862 + -2.4 4,147,926 + -0.7 4,147,926 + -0.6 4,147,927 - +0.3 4,147,931 - +0.9 4,147,940 - -0.5 4,147,940 - +0.2 4,147,940 - +0.5 4,147,940 - +0.3 4,147,940 - +0.0 4,147,940 - -2.4 4,147,953 + +0.4 4,147,986 + -0.7 4,147,986 + +0.7 4,147,987 - +2.2 4,148,003 + QEN71_RS18630 0.11 -1.2 4,148,043 - QEN71_RS18630 0.19 +0.8 4,148,159 + QEN71_RS18630 0.44 -0.4 4,148,160 - QEN71_RS18630 0.44 -0.3 4,148,237 + QEN71_RS18630 0.61 +0.2 4,148,238 - QEN71_RS18630 0.61 -1.0 4,148,238 - QEN71_RS18630 0.61 -0.4 4,148,278 + QEN71_RS18630 0.70 -0.8 4,148,278 + QEN71_RS18630 0.70 +0.2 4,148,279 - QEN71_RS18630 0.70 -0.4 4,148,316 + QEN71_RS18630 0.78 -0.9 4,148,316 + QEN71_RS18630 0.78 +1.2 4,148,316 + QEN71_RS18630 0.78 -1.8 4,148,316 + QEN71_RS18630 0.78 +0.3 4,148,316 + QEN71_RS18630 0.78 -1.9 4,148,317 - QEN71_RS18630 0.78 -1.9 4,148,317 - QEN71_RS18630 0.78 +0.3 4,148,317 - QEN71_RS18630 0.78 +0.3 4,148,322 + QEN71_RS18630 0.79 +0.4 4,148,322 + QEN71_RS18630 0.79 -0.1 4,148,322 + QEN71_RS18630 0.79 +0.6 4,148,322 + QEN71_RS18630 0.79 -1.4 4,148,322 + QEN71_RS18630 0.79 +0.0 4,148,323 - QEN71_RS18630 0.79 -0.6 4,148,323 - QEN71_RS18630 0.79 -1.1 4,148,323 - QEN71_RS18630 0.79 -1.0 4,148,323 - QEN71_RS18630 0.79 -0.4 4,148,323 - QEN71_RS18630 0.79 -0.8 4,148,323 - QEN71_RS18630 0.79 -0.9 4,148,323 - QEN71_RS18630 0.79 -0.9 4,148,323 - QEN71_RS18630 0.79 -0.2 4,148,392 + -2.4 4,148,392 + +0.8 4,148,392 + -1.5 4,148,393 - -0.1 4,148,403 + -1.5 4,148,420 - -0.7 4,148,436 + +0.6 4,148,436 + +0.4 4,148,449 + -0.8 4,148,598 - QEN71_RS18635 0.40 -1.5 4,148,669 - QEN71_RS18635 0.58 -2.4 4,148,811 - -0.2 4,148,811 - -1.2 4,148,854 - -0.6 4,148,859 - -2.0 4,148,901 - +0.2 4,148,920 + -0.9 4,148,921 - -0.0 4,148,921 - +0.5 4,148,940 + +0.4 4,148,940 + -1.4 4,148,941 - -0.1 4,148,941 - -0.2 4,148,941 - -0.1 4,148,941 - -0.6 4,148,950 + -0.1 4,148,951 - +0.5 4,148,951 - +0.2 4,149,214 + -0.5 4,149,215 - -0.5 4,149,215 - -1.3 4,149,215 - +0.4 4,149,216 + -0.6 4,149,216 + -0.6 4,149,217 - -0.4 4,149,217 - +0.6 4,149,218 + -2.4 4,149,218 + -0.8 4,149,218 + +0.2 4,149,218 + +1.2 4,149,219 - -0.8 4,149,219 - +0.2 4,149,227 - +0.5 4,149,227 - -0.9 4,149,227 - +0.8 4,149,313 - -0.0 4,149,350 + -0.8 4,149,351 - +1.4 4,149,473 - QEN71_RS18640 0.13 -0.2 4,149,576 - QEN71_RS18640 0.24 -0.2 4,149,576 - QEN71_RS18640 0.24 -0.2 4,149,576 - QEN71_RS18640 0.24 -0.6 4,149,672 + QEN71_RS18640 0.34 -0.5 4,149,672 + QEN71_RS18640 0.34 -1.3 4,149,672 + QEN71_RS18640 0.34 -0.4 4,149,672 + QEN71_RS18640 0.34 +0.1 4,149,673 - QEN71_RS18640 0.34 +0.4 4,149,673 - QEN71_RS18640 0.34 +0.6 4,149,731 + QEN71_RS18640 0.40 -1.2 4,149,731 + QEN71_RS18640 0.40 -1.3 4,149,732 - QEN71_RS18640 0.41 -0.4 4,149,732 - QEN71_RS18640 0.41 -0.2 4,149,732 - QEN71_RS18640 0.41 -0.3 4,149,734 + QEN71_RS18640 0.41 -0.6 4,149,734 + QEN71_RS18640 0.41 -0.1 4,149,734 + QEN71_RS18640 0.41 -0.8 4,149,735 - QEN71_RS18640 0.41 +0.2 4,149,735 - QEN71_RS18640 0.41 +0.8
Or see this region's nucleotide sequence