Experiment: LB_noSalt with Zinc 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS17570 and QEN71_RS17575 are separated by 152 nucleotides QEN71_RS17575 and QEN71_RS17580 are separated by 3 nucleotides QEN71_RS17580 and QEN71_RS17585 are separated by 4 nucleotides
QEN71_RS17570: QEN71_RS17570 - GntR family transcriptional regulator, at 3,907,908 to 3,908,708
_RS17570
QEN71_RS17575: QEN71_RS17575 - succinate dehydrogenase, cytochrome b556 subunit, at 3,908,861 to 3,909,277
_RS17575
QEN71_RS17580: QEN71_RS17580 - succinate dehydrogenase, hydrophobic membrane anchor protein, at 3,909,281 to 3,909,649
_RS17580
QEN71_RS17585: QEN71_RS17585 - succinate dehydrogenase flavoprotein subunit, at 3,909,654 to 3,911,429
_RS17585
Position (kb)
3908
3909
3910 Strain fitness (log2 ratio)
-2
-1
0
1 at 3908.013 kb on + strand, within QEN71_RS17570 at 3908.013 kb on + strand, within QEN71_RS17570 at 3908.013 kb on + strand, within QEN71_RS17570 at 3908.013 kb on + strand, within QEN71_RS17570 at 3908.013 kb on + strand, within QEN71_RS17570 at 3908.014 kb on - strand, within QEN71_RS17570 at 3908.014 kb on - strand, within QEN71_RS17570 at 3908.014 kb on - strand, within QEN71_RS17570 at 3908.014 kb on - strand, within QEN71_RS17570 at 3908.014 kb on - strand, within QEN71_RS17570 at 3908.014 kb on - strand, within QEN71_RS17570 at 3908.014 kb on - strand, within QEN71_RS17570 at 3908.084 kb on + strand, within QEN71_RS17570 at 3908.085 kb on - strand, within QEN71_RS17570 at 3908.085 kb on - strand, within QEN71_RS17570 at 3908.085 kb on - strand, within QEN71_RS17570 at 3908.110 kb on - strand, within QEN71_RS17570 at 3908.110 kb on - strand, within QEN71_RS17570 at 3908.174 kb on - strand, within QEN71_RS17570 at 3908.204 kb on + strand, within QEN71_RS17570 at 3908.205 kb on - strand, within QEN71_RS17570 at 3908.288 kb on - strand, within QEN71_RS17570 at 3908.470 kb on - strand, within QEN71_RS17570 at 3908.470 kb on - strand, within QEN71_RS17570 at 3908.484 kb on + strand, within QEN71_RS17570 at 3908.485 kb on - strand, within QEN71_RS17570 at 3908.625 kb on + strand, within QEN71_RS17570 at 3908.625 kb on + strand, within QEN71_RS17570 at 3908.626 kb on - strand, within QEN71_RS17570 at 3908.626 kb on - strand, within QEN71_RS17570 at 3908.627 kb on + strand, within QEN71_RS17570 at 3908.627 kb on + strand, within QEN71_RS17570 at 3908.627 kb on + strand, within QEN71_RS17570 at 3908.628 kb on - strand, within QEN71_RS17570 at 3908.628 kb on - strand, within QEN71_RS17570 at 3908.628 kb on - strand, within QEN71_RS17570 at 3908.628 kb on - strand, within QEN71_RS17570 at 3908.628 kb on - strand, within QEN71_RS17570 at 3908.628 kb on - strand, within QEN71_RS17570 at 3908.628 kb on - strand, within QEN71_RS17570 at 3908.628 kb on - strand, within QEN71_RS17570 at 3908.628 kb on - strand, within QEN71_RS17570 at 3908.628 kb on - strand, within QEN71_RS17570 at 3908.628 kb on - strand, within QEN71_RS17570 at 3908.631 kb on + strand at 3908.631 kb on + strand at 3908.631 kb on + strand at 3908.631 kb on + strand at 3908.631 kb on + strand at 3908.632 kb on - strand at 3908.632 kb on - strand at 3908.632 kb on - strand at 3908.632 kb on - strand at 3908.632 kb on - strand at 3908.632 kb on - strand at 3908.632 kb on - strand at 3908.667 kb on + strand at 3908.667 kb on + strand at 3908.667 kb on + strand at 3908.667 kb on + strand at 3908.667 kb on + strand at 3908.667 kb on + strand at 3908.667 kb on + strand at 3908.667 kb on + strand at 3908.667 kb on + strand at 3908.668 kb on - strand at 3908.668 kb on - strand at 3908.668 kb on - strand at 3908.668 kb on - strand at 3908.668 kb on - strand at 3908.668 kb on - strand at 3908.668 kb on - strand at 3908.668 kb on - strand at 3908.685 kb on + strand at 3908.686 kb on - strand at 3908.686 kb on - strand at 3908.689 kb on - strand at 3908.689 kb on - strand at 3908.792 kb on + strand at 3908.792 kb on + strand at 3908.793 kb on - strand at 3908.793 kb on - strand at 3908.793 kb on - strand at 3908.833 kb on + strand at 3908.833 kb on + strand at 3908.834 kb on - strand at 3908.842 kb on + strand at 3908.842 kb on + strand at 3908.843 kb on - strand at 3908.846 kb on + strand at 3908.846 kb on + strand at 3908.846 kb on + strand at 3908.846 kb on + strand at 3908.846 kb on + strand at 3908.846 kb on + strand at 3908.846 kb on + strand at 3908.846 kb on + strand at 3908.846 kb on + strand at 3908.846 kb on + strand at 3908.846 kb on + strand at 3908.846 kb on + strand at 3908.846 kb on + strand at 3908.847 kb on - strand at 3908.847 kb on - strand at 3908.847 kb on - strand at 3908.847 kb on - strand at 3908.847 kb on - strand at 3908.847 kb on - strand at 3908.847 kb on - strand at 3908.847 kb on - strand at 3908.847 kb on - strand at 3908.847 kb on - strand at 3908.847 kb on - strand at 3908.849 kb on + strand at 3908.850 kb on - strand at 3908.857 kb on + strand at 3908.857 kb on + strand at 3908.857 kb on + strand at 3908.857 kb on + strand at 3908.857 kb on + strand at 3908.858 kb on - strand at 3908.858 kb on - strand at 3908.858 kb on - strand at 3908.858 kb on - strand at 3908.858 kb on - strand at 3908.858 kb on - strand at 3908.858 kb on - strand at 3908.919 kb on + strand, within QEN71_RS17575 at 3908.919 kb on + strand, within QEN71_RS17575
Per-strain Table
Position Strand Gene LocusTag Fraction LB_noSalt with Zinc 0.5 mM remove 3,908,013 + QEN71_RS17570 0.13 -1.2 3,908,013 + QEN71_RS17570 0.13 -1.0 3,908,013 + QEN71_RS17570 0.13 +0.2 3,908,013 + QEN71_RS17570 0.13 -1.0 3,908,013 + QEN71_RS17570 0.13 -2.1 3,908,014 - QEN71_RS17570 0.13 -1.4 3,908,014 - QEN71_RS17570 0.13 -0.2 3,908,014 - QEN71_RS17570 0.13 -0.4 3,908,014 - QEN71_RS17570 0.13 -1.3 3,908,014 - QEN71_RS17570 0.13 -0.6 3,908,014 - QEN71_RS17570 0.13 -0.8 3,908,014 - QEN71_RS17570 0.13 -0.6 3,908,084 + QEN71_RS17570 0.22 -1.2 3,908,085 - QEN71_RS17570 0.22 +0.4 3,908,085 - QEN71_RS17570 0.22 -2.0 3,908,085 - QEN71_RS17570 0.22 -0.4 3,908,110 - QEN71_RS17570 0.25 -2.1 3,908,110 - QEN71_RS17570 0.25 -2.7 3,908,174 - QEN71_RS17570 0.33 +1.2 3,908,204 + QEN71_RS17570 0.37 -1.8 3,908,205 - QEN71_RS17570 0.37 +0.2 3,908,288 - QEN71_RS17570 0.47 -0.4 3,908,470 - QEN71_RS17570 0.70 -1.6 3,908,470 - QEN71_RS17570 0.70 +0.8 3,908,484 + QEN71_RS17570 0.72 -1.2 3,908,485 - QEN71_RS17570 0.72 -1.6 3,908,625 + QEN71_RS17570 0.90 -1.0 3,908,625 + QEN71_RS17570 0.90 -1.0 3,908,626 - QEN71_RS17570 0.90 +0.7 3,908,626 - QEN71_RS17570 0.90 -0.8 3,908,627 + QEN71_RS17570 0.90 -0.4 3,908,627 + QEN71_RS17570 0.90 -0.4 3,908,627 + QEN71_RS17570 0.90 +0.2 3,908,628 - QEN71_RS17570 0.90 +0.8 3,908,628 - QEN71_RS17570 0.90 -1.4 3,908,628 - QEN71_RS17570 0.90 -0.8 3,908,628 - QEN71_RS17570 0.90 -2.0 3,908,628 - QEN71_RS17570 0.90 +0.2 3,908,628 - QEN71_RS17570 0.90 -1.2 3,908,628 - QEN71_RS17570 0.90 -0.9 3,908,628 - QEN71_RS17570 0.90 -0.8 3,908,628 - QEN71_RS17570 0.90 -1.0 3,908,628 - QEN71_RS17570 0.90 -0.2 3,908,628 - QEN71_RS17570 0.90 -0.6 3,908,631 + -0.6 3,908,631 + -2.2 3,908,631 + -0.2 3,908,631 + -0.8 3,908,631 + +0.2 3,908,632 - +0.2 3,908,632 - -0.2 3,908,632 - -0.8 3,908,632 - -1.5 3,908,632 - -0.2 3,908,632 - -1.3 3,908,632 - -0.4 3,908,667 + -1.0 3,908,667 + +0.2 3,908,667 + +0.2 3,908,667 + -0.6 3,908,667 + -1.6 3,908,667 + +0.2 3,908,667 + -0.6 3,908,667 + +0.8 3,908,667 + +0.8 3,908,668 - -0.6 3,908,668 - -2.0 3,908,668 - -1.2 3,908,668 - +0.2 3,908,668 - +0.2 3,908,668 - -0.8 3,908,668 - -0.6 3,908,668 - -0.2 3,908,685 + +0.2 3,908,686 - +0.2 3,908,686 - +0.2 3,908,689 - -2.1 3,908,689 - +0.6 3,908,792 + -0.8 3,908,792 + +0.2 3,908,793 - +0.4 3,908,793 - -1.9 3,908,793 - -0.8 3,908,833 + +0.8 3,908,833 + -0.0 3,908,834 - -1.2 3,908,842 + +0.6 3,908,842 + +0.7 3,908,843 - -1.1 3,908,846 + -0.9 3,908,846 + +0.8 3,908,846 + -1.1 3,908,846 + -0.9 3,908,846 + +0.9 3,908,846 + +0.6 3,908,846 + -0.5 3,908,846 + +0.6 3,908,846 + -0.4 3,908,846 + -0.1 3,908,846 + -0.3 3,908,846 + +1.1 3,908,846 + -2.2 3,908,847 - -0.4 3,908,847 - -0.9 3,908,847 - +0.3 3,908,847 - -1.3 3,908,847 - -1.2 3,908,847 - -0.7 3,908,847 - +0.0 3,908,847 - -0.6 3,908,847 - -1.6 3,908,847 - -1.3 3,908,847 - -1.6 3,908,849 + -0.2 3,908,850 - -1.9 3,908,857 + -1.4 3,908,857 + -0.4 3,908,857 + +0.3 3,908,857 + -0.6 3,908,857 + +0.1 3,908,858 - -0.2 3,908,858 - -1.3 3,908,858 - -2.1 3,908,858 - -1.1 3,908,858 - -0.5 3,908,858 - +0.6 3,908,858 - -1.0 3,908,919 + QEN71_RS17575 0.14 -1.3 3,908,919 + QEN71_RS17575 0.14 -1.3
Or see this region's nucleotide sequence