Experiment: LB_noSalt with Zinc 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS15830 and QEN71_RS15835 are separated by 29 nucleotides QEN71_RS15835 and QEN71_RS15840 are separated by 77 nucleotides QEN71_RS15840 and QEN71_RS15845 are separated by 223 nucleotides QEN71_RS15845 and QEN71_RS15850 are separated by 65 nucleotides
QEN71_RS15830: QEN71_RS15830 - TauD/TfdA family dioxygenase, at 3,532,715 to 3,533,740
_RS15830
QEN71_RS15835: QEN71_RS15835 - MbtH family NRPS accessory protein, at 3,533,770 to 3,534,003
_RS15835
QEN71_RS15840: QEN71_RS15840 - RNA polymerase factor sigma-70, at 3,534,081 to 3,534,704
_RS15840
QEN71_RS15845: QEN71_RS15845 - 4'-phosphopantetheinyl transferase superfamily protein, at 3,534,928 to 3,535,623
_RS15845
QEN71_RS15850: QEN71_RS15850 - MFS transporter, at 3,535,689 to 3,537,020
_RS15850
Position (kb)
3534
3535 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3533.256 kb on + strand, within QEN71_RS15830 at 3533.256 kb on + strand, within QEN71_RS15830 at 3533.256 kb on + strand, within QEN71_RS15830 at 3533.256 kb on + strand, within QEN71_RS15830 at 3533.256 kb on + strand, within QEN71_RS15830 at 3533.256 kb on + strand, within QEN71_RS15830 at 3533.257 kb on - strand, within QEN71_RS15830 at 3533.257 kb on - strand, within QEN71_RS15830 at 3533.257 kb on - strand, within QEN71_RS15830 at 3533.257 kb on - strand, within QEN71_RS15830 at 3533.257 kb on - strand, within QEN71_RS15830 at 3533.257 kb on - strand, within QEN71_RS15830 at 3533.257 kb on - strand, within QEN71_RS15830 at 3533.257 kb on - strand, within QEN71_RS15830 at 3533.258 kb on + strand, within QEN71_RS15830 at 3533.258 kb on + strand, within QEN71_RS15830 at 3533.258 kb on + strand, within QEN71_RS15830 at 3533.258 kb on + strand, within QEN71_RS15830 at 3533.259 kb on - strand, within QEN71_RS15830 at 3533.259 kb on - strand, within QEN71_RS15830 at 3533.310 kb on + strand, within QEN71_RS15830 at 3533.310 kb on + strand, within QEN71_RS15830 at 3533.404 kb on - strand, within QEN71_RS15830 at 3533.458 kb on + strand, within QEN71_RS15830 at 3533.458 kb on + strand, within QEN71_RS15830 at 3533.459 kb on - strand, within QEN71_RS15830 at 3533.459 kb on - strand, within QEN71_RS15830 at 3533.459 kb on - strand, within QEN71_RS15830 at 3533.459 kb on - strand, within QEN71_RS15830 at 3533.459 kb on - strand, within QEN71_RS15830 at 3533.459 kb on - strand, within QEN71_RS15830 at 3533.459 kb on - strand, within QEN71_RS15830 at 3533.459 kb on - strand, within QEN71_RS15830 at 3533.460 kb on + strand, within QEN71_RS15830 at 3533.461 kb on - strand, within QEN71_RS15830 at 3533.461 kb on - strand, within QEN71_RS15830 at 3533.552 kb on - strand, within QEN71_RS15830 at 3533.552 kb on - strand, within QEN71_RS15830 at 3533.844 kb on + strand, within QEN71_RS15835 at 3533.845 kb on - strand, within QEN71_RS15835 at 3533.845 kb on - strand, within QEN71_RS15835 at 3533.931 kb on - strand, within QEN71_RS15835 at 3534.004 kb on - strand at 3534.004 kb on - strand at 3534.004 kb on - strand at 3534.004 kb on - strand at 3534.126 kb on - strand at 3534.149 kb on - strand, within QEN71_RS15840 at 3534.283 kb on - strand, within QEN71_RS15840 at 3534.493 kb on + strand, within QEN71_RS15840 at 3534.493 kb on + strand, within QEN71_RS15840 at 3534.493 kb on + strand, within QEN71_RS15840 at 3534.493 kb on + strand, within QEN71_RS15840 at 3534.493 kb on + strand, within QEN71_RS15840 at 3534.493 kb on + strand, within QEN71_RS15840 at 3534.493 kb on + strand, within QEN71_RS15840 at 3534.494 kb on - strand, within QEN71_RS15840 at 3534.494 kb on - strand, within QEN71_RS15840 at 3534.494 kb on - strand, within QEN71_RS15840 at 3534.494 kb on - strand, within QEN71_RS15840 at 3534.858 kb on + strand at 3534.859 kb on - strand at 3534.863 kb on + strand at 3534.863 kb on + strand at 3534.864 kb on - strand at 3534.902 kb on + strand at 3534.902 kb on + strand at 3534.903 kb on - strand at 3534.905 kb on + strand at 3534.906 kb on - strand at 3534.922 kb on + strand at 3534.929 kb on + strand at 3534.966 kb on - strand at 3534.997 kb on + strand at 3534.997 kb on + strand at 3534.997 kb on + strand at 3534.997 kb on + strand at 3534.997 kb on + strand at 3534.998 kb on - strand, within QEN71_RS15845 at 3535.067 kb on - strand, within QEN71_RS15845 at 3535.067 kb on - strand, within QEN71_RS15845 at 3535.077 kb on + strand, within QEN71_RS15845 at 3535.384 kb on + strand, within QEN71_RS15845 at 3535.384 kb on + strand, within QEN71_RS15845 at 3535.384 kb on + strand, within QEN71_RS15845 at 3535.384 kb on + strand, within QEN71_RS15845 at 3535.384 kb on + strand, within QEN71_RS15845 at 3535.384 kb on + strand, within QEN71_RS15845 at 3535.384 kb on + strand, within QEN71_RS15845 at 3535.385 kb on - strand, within QEN71_RS15845 at 3535.385 kb on - strand, within QEN71_RS15845 at 3535.385 kb on - strand, within QEN71_RS15845 at 3535.385 kb on - strand, within QEN71_RS15845 at 3535.385 kb on - strand, within QEN71_RS15845 at 3535.385 kb on - strand, within QEN71_RS15845 at 3535.385 kb on - strand, within QEN71_RS15845 at 3535.510 kb on + strand, within QEN71_RS15845 at 3535.510 kb on + strand, within QEN71_RS15845 at 3535.511 kb on - strand, within QEN71_RS15845 at 3535.511 kb on - strand, within QEN71_RS15845 at 3535.511 kb on - strand, within QEN71_RS15845 at 3535.511 kb on - strand, within QEN71_RS15845 at 3535.511 kb on - strand, within QEN71_RS15845 at 3535.660 kb on - strand at 3535.690 kb on + strand at 3535.690 kb on + strand at 3535.691 kb on - strand at 3535.691 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB_noSalt with Zinc 0.5 mM remove 3,533,256 + QEN71_RS15830 0.53 -1.7 3,533,256 + QEN71_RS15830 0.53 -1.2 3,533,256 + QEN71_RS15830 0.53 -1.6 3,533,256 + QEN71_RS15830 0.53 -2.2 3,533,256 + QEN71_RS15830 0.53 -1.5 3,533,256 + QEN71_RS15830 0.53 -0.6 3,533,257 - QEN71_RS15830 0.53 -0.2 3,533,257 - QEN71_RS15830 0.53 -0.5 3,533,257 - QEN71_RS15830 0.53 -0.5 3,533,257 - QEN71_RS15830 0.53 -1.3 3,533,257 - QEN71_RS15830 0.53 -0.3 3,533,257 - QEN71_RS15830 0.53 +0.6 3,533,257 - QEN71_RS15830 0.53 -0.3 3,533,257 - QEN71_RS15830 0.53 +2.1 3,533,258 + QEN71_RS15830 0.53 +0.5 3,533,258 + QEN71_RS15830 0.53 -2.0 3,533,258 + QEN71_RS15830 0.53 -1.6 3,533,258 + QEN71_RS15830 0.53 -0.9 3,533,259 - QEN71_RS15830 0.53 +0.8 3,533,259 - QEN71_RS15830 0.53 +0.7 3,533,310 + QEN71_RS15830 0.58 -0.7 3,533,310 + QEN71_RS15830 0.58 -0.2 3,533,404 - QEN71_RS15830 0.67 +1.0 3,533,458 + QEN71_RS15830 0.72 -0.1 3,533,458 + QEN71_RS15830 0.72 -1.0 3,533,459 - QEN71_RS15830 0.73 -0.7 3,533,459 - QEN71_RS15830 0.73 +0.1 3,533,459 - QEN71_RS15830 0.73 -0.6 3,533,459 - QEN71_RS15830 0.73 -0.9 3,533,459 - QEN71_RS15830 0.73 -1.3 3,533,459 - QEN71_RS15830 0.73 +0.7 3,533,459 - QEN71_RS15830 0.73 +0.0 3,533,459 - QEN71_RS15830 0.73 -1.0 3,533,460 + QEN71_RS15830 0.73 -1.6 3,533,461 - QEN71_RS15830 0.73 -1.6 3,533,461 - QEN71_RS15830 0.73 +0.3 3,533,552 - QEN71_RS15830 0.82 -1.8 3,533,552 - QEN71_RS15830 0.82 -0.5 3,533,844 + QEN71_RS15835 0.32 -0.6 3,533,845 - QEN71_RS15835 0.32 -1.6 3,533,845 - QEN71_RS15835 0.32 +0.1 3,533,931 - QEN71_RS15835 0.69 -1.6 3,534,004 - -0.5 3,534,004 - -0.4 3,534,004 - -1.0 3,534,004 - -0.5 3,534,126 - +0.0 3,534,149 - QEN71_RS15840 0.11 -2.4 3,534,283 - QEN71_RS15840 0.32 -0.3 3,534,493 + QEN71_RS15840 0.66 -1.8 3,534,493 + QEN71_RS15840 0.66 -1.3 3,534,493 + QEN71_RS15840 0.66 -2.2 3,534,493 + QEN71_RS15840 0.66 +0.1 3,534,493 + QEN71_RS15840 0.66 -2.1 3,534,493 + QEN71_RS15840 0.66 -1.9 3,534,493 + QEN71_RS15840 0.66 -1.0 3,534,494 - QEN71_RS15840 0.66 +0.0 3,534,494 - QEN71_RS15840 0.66 -0.9 3,534,494 - QEN71_RS15840 0.66 +0.1 3,534,494 - QEN71_RS15840 0.66 -1.9 3,534,858 + -0.5 3,534,859 - -0.7 3,534,863 + -1.8 3,534,863 + -0.9 3,534,864 - -1.1 3,534,902 + -0.8 3,534,902 + -0.0 3,534,903 - -1.0 3,534,905 + -1.0 3,534,906 - +0.1 3,534,922 + -0.7 3,534,929 + +1.7 3,534,966 - +0.2 3,534,997 + -0.6 3,534,997 + +0.7 3,534,997 + -0.7 3,534,997 + +0.9 3,534,997 + -1.0 3,534,998 - QEN71_RS15845 0.10 -0.4 3,535,067 - QEN71_RS15845 0.20 +0.3 3,535,067 - QEN71_RS15845 0.20 +0.1 3,535,077 + QEN71_RS15845 0.21 -0.7 3,535,384 + QEN71_RS15845 0.66 -1.2 3,535,384 + QEN71_RS15845 0.66 +0.9 3,535,384 + QEN71_RS15845 0.66 -0.4 3,535,384 + QEN71_RS15845 0.66 -0.5 3,535,384 + QEN71_RS15845 0.66 +0.5 3,535,384 + QEN71_RS15845 0.66 -0.6 3,535,384 + QEN71_RS15845 0.66 +0.5 3,535,385 - QEN71_RS15845 0.66 -2.0 3,535,385 - QEN71_RS15845 0.66 -1.2 3,535,385 - QEN71_RS15845 0.66 -0.2 3,535,385 - QEN71_RS15845 0.66 +0.5 3,535,385 - QEN71_RS15845 0.66 -1.5 3,535,385 - QEN71_RS15845 0.66 -0.4 3,535,385 - QEN71_RS15845 0.66 -0.0 3,535,510 + QEN71_RS15845 0.84 +0.7 3,535,510 + QEN71_RS15845 0.84 -0.5 3,535,511 - QEN71_RS15845 0.84 +0.2 3,535,511 - QEN71_RS15845 0.84 -0.0 3,535,511 - QEN71_RS15845 0.84 -0.0 3,535,511 - QEN71_RS15845 0.84 -0.0 3,535,511 - QEN71_RS15845 0.84 -0.2 3,535,660 - +0.8 3,535,690 + -1.3 3,535,690 + -2.1 3,535,691 - +0.1 3,535,691 - -0.6
Or see this region's nucleotide sequence