Experiment: LB_noSalt with Zinc 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS13095 and QEN71_RS13100 are separated by 23 nucleotides QEN71_RS13100 and QEN71_RS13105 are separated by 30 nucleotides QEN71_RS13105 and QEN71_RS13110 are separated by 625 nucleotides
QEN71_RS13095: QEN71_RS13095 - ABC transporter permease, at 2,928,774 to 2,929,763
_RS13095
QEN71_RS13100: QEN71_RS13100 - ATP-binding cassette domain-containing protein, at 2,929,787 to 2,930,596
_RS13100
QEN71_RS13105: QEN71_RS13105 - ROK family transcriptional regulator, at 2,930,627 to 2,931,844
_RS13105
QEN71_RS13110: QEN71_RS13110 - transglycosylase domain-containing protein, at 2,932,470 to 2,935,526
_RS13110
Position (kb)
2930
2931
2932 Strain fitness (log2 ratio)
-2
-1
0
1 at 2929.686 kb on + strand at 2929.686 kb on + strand at 2929.686 kb on + strand at 2929.687 kb on - strand at 2929.769 kb on + strand at 2930.078 kb on + strand, within QEN71_RS13100 at 2930.705 kb on - strand at 2930.705 kb on - strand at 2930.901 kb on - strand, within QEN71_RS13105 at 2930.903 kb on - strand, within QEN71_RS13105 at 2930.959 kb on - strand, within QEN71_RS13105 at 2930.990 kb on + strand, within QEN71_RS13105 at 2931.081 kb on + strand, within QEN71_RS13105 at 2931.297 kb on - strand, within QEN71_RS13105 at 2931.541 kb on + strand, within QEN71_RS13105 at 2931.667 kb on + strand, within QEN71_RS13105 at 2931.668 kb on - strand, within QEN71_RS13105 at 2931.695 kb on - strand, within QEN71_RS13105 at 2931.776 kb on - strand at 2931.776 kb on - strand at 2931.788 kb on + strand at 2931.839 kb on + strand at 2931.839 kb on + strand at 2931.840 kb on - strand at 2931.840 kb on - strand at 2931.843 kb on - strand at 2931.843 kb on - strand at 2931.922 kb on + strand at 2931.922 kb on + strand at 2932.085 kb on - strand at 2932.494 kb on - strand at 2932.494 kb on - strand at 2932.494 kb on - strand at 2932.560 kb on + strand at 2932.561 kb on - strand at 2932.561 kb on - strand at 2932.591 kb on + strand at 2932.591 kb on + strand at 2932.592 kb on - strand at 2932.592 kb on - strand at 2932.667 kb on + strand at 2932.705 kb on + strand at 2932.705 kb on + strand at 2932.706 kb on - strand at 2932.709 kb on + strand at 2932.709 kb on + strand at 2932.709 kb on + strand at 2932.710 kb on - strand at 2932.744 kb on + strand at 2932.744 kb on + strand at 2932.745 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB_noSalt with Zinc 0.5 mM remove 2,929,686 + +0.9 2,929,686 + -0.5 2,929,686 + -0.3 2,929,687 - -0.6 2,929,769 + -1.6 2,930,078 + QEN71_RS13100 0.36 -0.4 2,930,705 - -0.2 2,930,705 - +0.2 2,930,901 - QEN71_RS13105 0.22 -1.1 2,930,903 - QEN71_RS13105 0.23 +1.2 2,930,959 - QEN71_RS13105 0.27 -0.1 2,930,990 + QEN71_RS13105 0.30 -0.4 2,931,081 + QEN71_RS13105 0.37 -0.8 2,931,297 - QEN71_RS13105 0.55 -0.9 2,931,541 + QEN71_RS13105 0.75 +1.3 2,931,667 + QEN71_RS13105 0.85 -0.5 2,931,668 - QEN71_RS13105 0.85 -1.1 2,931,695 - QEN71_RS13105 0.88 -0.5 2,931,776 - -0.2 2,931,776 - -1.8 2,931,788 + -0.2 2,931,839 + -1.0 2,931,839 + -1.9 2,931,840 - -1.0 2,931,840 - -1.7 2,931,843 - -0.8 2,931,843 - +1.1 2,931,922 + +1.0 2,931,922 + -1.9 2,932,085 - +0.0 2,932,494 - -0.4 2,932,494 - -0.5 2,932,494 - -1.0 2,932,560 + +0.9 2,932,561 - +0.6 2,932,561 - -0.1 2,932,591 + -0.5 2,932,591 + -0.2 2,932,592 - -1.8 2,932,592 - -0.9 2,932,667 + +0.4 2,932,705 + +0.1 2,932,705 + -1.6 2,932,706 - +0.8 2,932,709 + -0.4 2,932,709 + +1.0 2,932,709 + +0.2 2,932,710 - -0.6 2,932,744 + -1.1 2,932,744 + +0.2 2,932,745 - -2.1
Or see this region's nucleotide sequence