Experiment: LB_noSalt with Zinc 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS12035 and QEN71_RS12040 are separated by 25 nucleotides QEN71_RS12040 and QEN71_RS12045 are separated by 15 nucleotides QEN71_RS12045 and QEN71_RS12050 are separated by 22 nucleotides QEN71_RS12050 and QEN71_RS12055 are separated by 8 nucleotides
QEN71_RS12035: QEN71_RS12035 - 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase, at 2,682,548 to 2,684,008
_RS12035
QEN71_RS12040: QEN71_RS12040 - 3,4-dihydroxyphenylacetate 2,3-dioxygenase, at 2,684,034 to 2,684,897
_RS12040
QEN71_RS12045: QEN71_RS12045 - 5-carboxymethyl-2-hydroxymuconate Delta-isomerase, at 2,684,913 to 2,685,311
_RS12045
QEN71_RS12050: QEN71_RS12050 - 2-oxo-hepta-3-ene-1,7-dioic acid hydratase, at 2,685,334 to 2,686,137
_RS12050
QEN71_RS12055: QEN71_RS12055 - 4-hydroxy-2-oxoheptanedioate aldolase, at 2,686,146 to 2,686,961
_RS12055
Position (kb)
2684
2685
2686 Strain fitness (log2 ratio)
-2
-1
0
1 at 2683.924 kb on + strand at 2683.934 kb on + strand at 2683.969 kb on - strand at 2684.063 kb on - strand at 2684.223 kb on + strand, within QEN71_RS12040 at 2684.224 kb on - strand, within QEN71_RS12040 at 2684.224 kb on - strand, within QEN71_RS12040 at 2684.259 kb on + strand, within QEN71_RS12040 at 2684.294 kb on + strand, within QEN71_RS12040 at 2684.430 kb on + strand, within QEN71_RS12040 at 2684.480 kb on + strand, within QEN71_RS12040 at 2684.481 kb on - strand, within QEN71_RS12040 at 2684.481 kb on - strand, within QEN71_RS12040 at 2684.481 kb on - strand, within QEN71_RS12040 at 2684.727 kb on + strand, within QEN71_RS12040 at 2684.727 kb on + strand, within QEN71_RS12040 at 2684.810 kb on + strand, within QEN71_RS12040 at 2684.810 kb on + strand, within QEN71_RS12040 at 2684.811 kb on - strand at 2684.935 kb on - strand at 2685.031 kb on - strand, within QEN71_RS12045 at 2685.075 kb on + strand, within QEN71_RS12045 at 2685.338 kb on + strand at 2685.339 kb on - strand at 2685.592 kb on - strand, within QEN71_RS12050 at 2685.911 kb on - strand, within QEN71_RS12050 at 2686.084 kb on - strand at 2686.099 kb on + strand at 2686.100 kb on - strand at 2686.163 kb on + strand at 2686.164 kb on - strand at 2686.307 kb on + strand, within QEN71_RS12055 at 2686.307 kb on + strand, within QEN71_RS12055 at 2686.307 kb on + strand, within QEN71_RS12055
Per-strain Table
Position Strand Gene LocusTag Fraction LB_noSalt with Zinc 0.5 mM remove 2,683,924 + -0.5 2,683,934 + -1.3 2,683,969 - -0.4 2,684,063 - -0.7 2,684,223 + QEN71_RS12040 0.22 -0.4 2,684,224 - QEN71_RS12040 0.22 -1.0 2,684,224 - QEN71_RS12040 0.22 +0.5 2,684,259 + QEN71_RS12040 0.26 -0.3 2,684,294 + QEN71_RS12040 0.30 -1.0 2,684,430 + QEN71_RS12040 0.46 -0.0 2,684,480 + QEN71_RS12040 0.52 +0.3 2,684,481 - QEN71_RS12040 0.52 +1.6 2,684,481 - QEN71_RS12040 0.52 -1.4 2,684,481 - QEN71_RS12040 0.52 -0.8 2,684,727 + QEN71_RS12040 0.80 +0.6 2,684,727 + QEN71_RS12040 0.80 +1.6 2,684,810 + QEN71_RS12040 0.90 -1.6 2,684,810 + QEN71_RS12040 0.90 +0.5 2,684,811 - -0.6 2,684,935 - +0.5 2,685,031 - QEN71_RS12045 0.30 +0.1 2,685,075 + QEN71_RS12045 0.41 -2.1 2,685,338 + -0.3 2,685,339 - -0.2 2,685,592 - QEN71_RS12050 0.32 +0.8 2,685,911 - QEN71_RS12050 0.72 +0.6 2,686,084 - +0.0 2,686,099 + -0.3 2,686,100 - -0.5 2,686,163 + +0.1 2,686,164 - +0.9 2,686,307 + QEN71_RS12055 0.20 +0.3 2,686,307 + QEN71_RS12055 0.20 +1.2 2,686,307 + QEN71_RS12055 0.20 +1.1
Or see this region's nucleotide sequence