Experiment: LB_noSalt with Zinc 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS11060 and QEN71_RS11065 are separated by 84 nucleotides QEN71_RS11065 and QEN71_RS11070 overlap by 4 nucleotides
QEN71_RS11060: QEN71_RS11060 - glycine betaine ABC transporter substrate-binding protein, at 2,459,902 to 2,460,783
_RS11060
QEN71_RS11065: QEN71_RS11065 - proline/glycine betaine ABC transporter permease, at 2,460,868 to 2,461,752
_RS11065
QEN71_RS11070: QEN71_RS11070 - glycine betaine/L-proline ABC transporter ATP-binding protein, at 2,461,749 to 2,463,038
_RS11070
Position (kb)
2460
2461
2462 Strain fitness (log2 ratio)
-1
0
1 at 2459.904 kb on - strand at 2459.969 kb on + strand at 2460.279 kb on - strand, within QEN71_RS11060 at 2460.279 kb on - strand, within QEN71_RS11060 at 2460.411 kb on + strand, within QEN71_RS11060 at 2460.413 kb on + strand, within QEN71_RS11060 at 2460.413 kb on + strand, within QEN71_RS11060 at 2460.414 kb on - strand, within QEN71_RS11060 at 2460.449 kb on + strand, within QEN71_RS11060 at 2460.449 kb on + strand, within QEN71_RS11060 at 2460.449 kb on + strand, within QEN71_RS11060 at 2460.450 kb on - strand, within QEN71_RS11060 at 2460.450 kb on - strand, within QEN71_RS11060 at 2460.483 kb on - strand, within QEN71_RS11060 at 2460.483 kb on - strand, within QEN71_RS11060 at 2460.494 kb on + strand, within QEN71_RS11060 at 2460.829 kb on - strand at 2460.829 kb on - strand at 2460.829 kb on - strand at 2460.829 kb on - strand at 2461.050 kb on - strand, within QEN71_RS11065 at 2461.442 kb on - strand, within QEN71_RS11065 at 2461.515 kb on - strand, within QEN71_RS11065 at 2461.515 kb on - strand, within QEN71_RS11065 at 2461.515 kb on - strand, within QEN71_RS11065 at 2462.045 kb on - strand, within QEN71_RS11070 at 2462.161 kb on + strand, within QEN71_RS11070 at 2462.161 kb on + strand, within QEN71_RS11070 at 2462.162 kb on - strand, within QEN71_RS11070
Per-strain Table
Position Strand Gene LocusTag Fraction LB_noSalt with Zinc 0.5 mM remove 2,459,904 - +0.8 2,459,969 + +1.3 2,460,279 - QEN71_RS11060 0.43 -0.6 2,460,279 - QEN71_RS11060 0.43 +0.4 2,460,411 + QEN71_RS11060 0.58 +0.6 2,460,413 + QEN71_RS11060 0.58 -1.0 2,460,413 + QEN71_RS11060 0.58 -0.2 2,460,414 - QEN71_RS11060 0.58 +0.9 2,460,449 + QEN71_RS11060 0.62 +0.1 2,460,449 + QEN71_RS11060 0.62 +1.6 2,460,449 + QEN71_RS11060 0.62 +0.6 2,460,450 - QEN71_RS11060 0.62 -0.5 2,460,450 - QEN71_RS11060 0.62 +0.0 2,460,483 - QEN71_RS11060 0.66 -0.4 2,460,483 - QEN71_RS11060 0.66 +0.5 2,460,494 + QEN71_RS11060 0.67 +0.8 2,460,829 - +0.1 2,460,829 - -0.0 2,460,829 - -0.4 2,460,829 - -0.8 2,461,050 - QEN71_RS11065 0.21 -0.9 2,461,442 - QEN71_RS11065 0.65 -1.5 2,461,515 - QEN71_RS11065 0.73 -0.9 2,461,515 - QEN71_RS11065 0.73 -0.5 2,461,515 - QEN71_RS11065 0.73 -0.6 2,462,045 - QEN71_RS11070 0.23 +0.1 2,462,161 + QEN71_RS11070 0.32 -0.8 2,462,161 + QEN71_RS11070 0.32 -0.3 2,462,162 - QEN71_RS11070 0.32 -0.7
Or see this region's nucleotide sequence