Experiment: LB_noSalt with Zinc 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS10675 and QEN71_RS10680 are separated by 109 nucleotides QEN71_RS10680 and QEN71_RS10685 are separated by 49 nucleotides
QEN71_RS10675: QEN71_RS10675 - prepilin peptidase, at 2,367,277 to 2,367,816
_RS10675
QEN71_RS10680: QEN71_RS10680 - Flp family type IVb pilin, at 2,367,926 to 2,368,108
_RS10680
QEN71_RS10685: QEN71_RS10685 - Flp family type IVb pilin, at 2,368,158 to 2,368,340
_RS10685
Position (kb)
2368
2369 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2367.330 kb on - strand at 2367.406 kb on + strand, within QEN71_RS10675 at 2367.407 kb on - strand, within QEN71_RS10675 at 2367.599 kb on + strand, within QEN71_RS10675 at 2367.752 kb on + strand, within QEN71_RS10675 at 2367.753 kb on - strand, within QEN71_RS10675 at 2367.753 kb on - strand, within QEN71_RS10675 at 2367.753 kb on - strand, within QEN71_RS10675 at 2367.753 kb on - strand, within QEN71_RS10675 at 2367.917 kb on - strand at 2367.967 kb on - strand, within QEN71_RS10680 at 2368.050 kb on + strand, within QEN71_RS10680 at 2368.051 kb on - strand, within QEN71_RS10680 at 2368.198 kb on + strand, within QEN71_RS10685 at 2368.198 kb on + strand, within QEN71_RS10685 at 2368.282 kb on + strand, within QEN71_RS10685 at 2368.425 kb on + strand at 2368.425 kb on + strand at 2368.425 kb on + strand at 2368.425 kb on + strand at 2368.425 kb on + strand at 2368.425 kb on + strand at 2368.425 kb on + strand at 2368.425 kb on + strand at 2368.425 kb on + strand at 2368.426 kb on - strand at 2368.426 kb on - strand at 2368.426 kb on - strand at 2368.474 kb on + strand at 2368.474 kb on + strand at 2368.474 kb on + strand at 2368.475 kb on - strand at 2368.475 kb on - strand at 2368.481 kb on + strand at 2368.656 kb on + strand at 2368.656 kb on + strand at 2368.657 kb on - strand at 2369.087 kb on + strand at 2369.087 kb on + strand at 2369.093 kb on + strand at 2369.095 kb on + strand at 2369.095 kb on + strand at 2369.095 kb on + strand at 2369.095 kb on + strand at 2369.095 kb on + strand at 2369.096 kb on - strand at 2369.096 kb on - strand at 2369.096 kb on - strand at 2369.096 kb on - strand at 2369.106 kb on + strand at 2369.107 kb on - strand at 2369.118 kb on + strand at 2369.118 kb on + strand at 2369.118 kb on + strand at 2369.118 kb on + strand at 2369.118 kb on + strand at 2369.118 kb on + strand at 2369.118 kb on + strand at 2369.118 kb on + strand at 2369.119 kb on - strand at 2369.119 kb on - strand at 2369.119 kb on - strand at 2369.119 kb on - strand at 2369.119 kb on - strand at 2369.152 kb on + strand at 2369.152 kb on + strand at 2369.152 kb on + strand at 2369.153 kb on - strand at 2369.153 kb on - strand at 2369.153 kb on - strand at 2369.153 kb on - strand at 2369.176 kb on + strand at 2369.177 kb on - strand at 2369.223 kb on + strand at 2369.224 kb on - strand at 2369.268 kb on + strand at 2369.268 kb on + strand at 2369.268 kb on + strand at 2369.268 kb on + strand at 2369.268 kb on + strand at 2369.268 kb on + strand at 2369.268 kb on + strand at 2369.268 kb on + strand at 2369.268 kb on + strand at 2369.268 kb on + strand at 2369.269 kb on - strand at 2369.269 kb on - strand at 2369.269 kb on - strand at 2369.269 kb on - strand at 2369.287 kb on + strand at 2369.290 kb on + strand at 2369.290 kb on + strand at 2369.290 kb on + strand at 2369.290 kb on + strand at 2369.290 kb on + strand at 2369.290 kb on + strand at 2369.291 kb on - strand at 2369.291 kb on - strand at 2369.291 kb on - strand at 2369.291 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB_noSalt with Zinc 0.5 mM remove 2,367,330 - +0.4 2,367,406 + QEN71_RS10675 0.24 -2.0 2,367,407 - QEN71_RS10675 0.24 -1.2 2,367,599 + QEN71_RS10675 0.60 -0.6 2,367,752 + QEN71_RS10675 0.88 +1.8 2,367,753 - QEN71_RS10675 0.88 +0.2 2,367,753 - QEN71_RS10675 0.88 +0.2 2,367,753 - QEN71_RS10675 0.88 -0.1 2,367,753 - QEN71_RS10675 0.88 +2.0 2,367,917 - -1.4 2,367,967 - QEN71_RS10680 0.22 +0.3 2,368,050 + QEN71_RS10680 0.68 +0.4 2,368,051 - QEN71_RS10680 0.68 -0.8 2,368,198 + QEN71_RS10685 0.22 -0.5 2,368,198 + QEN71_RS10685 0.22 -2.5 2,368,282 + QEN71_RS10685 0.68 -1.1 2,368,425 + -0.4 2,368,425 + +0.4 2,368,425 + -0.4 2,368,425 + -0.1 2,368,425 + +1.0 2,368,425 + +0.8 2,368,425 + -0.6 2,368,425 + -1.0 2,368,425 + -0.3 2,368,426 - -1.0 2,368,426 - -0.0 2,368,426 - +0.2 2,368,474 + -0.2 2,368,474 + -0.2 2,368,474 + -0.9 2,368,475 - -3.0 2,368,475 - -0.5 2,368,481 + -0.5 2,368,656 + -0.1 2,368,656 + -0.4 2,368,657 - +0.2 2,369,087 + -2.6 2,369,087 + -1.9 2,369,093 + -1.5 2,369,095 + +0.8 2,369,095 + +0.2 2,369,095 + -0.1 2,369,095 + -0.3 2,369,095 + -0.1 2,369,096 - -0.2 2,369,096 - -1.4 2,369,096 - -1.0 2,369,096 - +1.2 2,369,106 + -1.9 2,369,107 - -0.8 2,369,118 + -0.2 2,369,118 + -0.1 2,369,118 + -0.1 2,369,118 + +1.3 2,369,118 + +0.8 2,369,118 + +0.2 2,369,118 + -0.0 2,369,118 + +0.3 2,369,119 - +0.5 2,369,119 - -0.8 2,369,119 - -0.1 2,369,119 - -0.7 2,369,119 - -0.1 2,369,152 + +1.1 2,369,152 + -1.2 2,369,152 + +1.6 2,369,153 - +0.8 2,369,153 - -2.1 2,369,153 - +0.1 2,369,153 - -0.5 2,369,176 + +1.1 2,369,177 - -1.6 2,369,223 + +0.2 2,369,224 - -0.2 2,369,268 + +0.1 2,369,268 + +0.2 2,369,268 + -0.2 2,369,268 + +0.4 2,369,268 + +0.1 2,369,268 + -1.8 2,369,268 + -0.6 2,369,268 + +1.0 2,369,268 + -0.3 2,369,268 + -0.6 2,369,269 - -1.2 2,369,269 - -0.5 2,369,269 - +0.2 2,369,269 - +0.8 2,369,287 + +1.6 2,369,290 + +0.1 2,369,290 + -1.1 2,369,290 + -0.0 2,369,290 + +0.9 2,369,290 + -0.9 2,369,290 + -1.4 2,369,291 - -2.5 2,369,291 - +0.6 2,369,291 - +0.4 2,369,291 - -1.0
Or see this region's nucleotide sequence