Experiment: LB_noSalt with Zinc 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS09530 and QEN71_RS09535 are separated by 325 nucleotides QEN71_RS09535 and QEN71_RS09540 are separated by 270 nucleotides
QEN71_RS09530: QEN71_RS09530 - isoprenylcysteine carboxylmethyltransferase family protein, at 2,132,471 to 2,133,079
_RS09530
QEN71_RS09535: QEN71_RS09535 - porin, at 2,133,405 to 2,134,535
_RS09535
QEN71_RS09540: QEN71_RS09540 - formaldehyde-activating enzyme, at 2,134,806 to 2,135,339
_RS09540
Position (kb)
2133
2134
2135 Strain fitness (log2 ratio)
-1
0
1
2
3 at 2132.470 kb on + strand at 2132.544 kb on + strand, within QEN71_RS09530 at 2132.545 kb on - strand, within QEN71_RS09530 at 2132.545 kb on - strand, within QEN71_RS09530 at 2132.556 kb on + strand, within QEN71_RS09530 at 2132.829 kb on + strand, within QEN71_RS09530 at 2132.830 kb on - strand, within QEN71_RS09530 at 2132.895 kb on - strand, within QEN71_RS09530 at 2133.016 kb on + strand, within QEN71_RS09530 at 2133.016 kb on + strand, within QEN71_RS09530 at 2133.016 kb on + strand, within QEN71_RS09530 at 2133.017 kb on - strand, within QEN71_RS09530 at 2133.042 kb on - strand at 2133.109 kb on - strand at 2133.195 kb on + strand at 2133.195 kb on + strand at 2133.330 kb on - strand at 2133.443 kb on - strand at 2133.768 kb on + strand, within QEN71_RS09535 at 2133.769 kb on - strand, within QEN71_RS09535 at 2133.791 kb on + strand, within QEN71_RS09535 at 2133.810 kb on + strand, within QEN71_RS09535 at 2133.810 kb on + strand, within QEN71_RS09535 at 2133.810 kb on + strand, within QEN71_RS09535 at 2133.870 kb on + strand, within QEN71_RS09535 at 2133.885 kb on + strand, within QEN71_RS09535 at 2134.023 kb on + strand, within QEN71_RS09535 at 2134.024 kb on - strand, within QEN71_RS09535 at 2134.024 kb on - strand, within QEN71_RS09535 at 2134.035 kb on + strand, within QEN71_RS09535 at 2134.035 kb on + strand, within QEN71_RS09535 at 2134.036 kb on - strand, within QEN71_RS09535 at 2134.036 kb on - strand, within QEN71_RS09535 at 2134.168 kb on - strand, within QEN71_RS09535 at 2134.263 kb on + strand, within QEN71_RS09535 at 2134.264 kb on - strand, within QEN71_RS09535 at 2134.281 kb on + strand, within QEN71_RS09535 at 2134.281 kb on + strand, within QEN71_RS09535 at 2134.282 kb on - strand, within QEN71_RS09535 at 2134.282 kb on - strand, within QEN71_RS09535 at 2134.282 kb on - strand, within QEN71_RS09535 at 2134.317 kb on + strand, within QEN71_RS09535 at 2134.317 kb on + strand, within QEN71_RS09535 at 2134.377 kb on + strand, within QEN71_RS09535 at 2134.377 kb on + strand, within QEN71_RS09535 at 2134.377 kb on + strand, within QEN71_RS09535 at 2134.377 kb on + strand, within QEN71_RS09535 at 2134.378 kb on - strand, within QEN71_RS09535 at 2134.404 kb on + strand, within QEN71_RS09535 at 2134.419 kb on + strand, within QEN71_RS09535 at 2134.419 kb on + strand, within QEN71_RS09535 at 2134.419 kb on + strand, within QEN71_RS09535 at 2134.608 kb on - strand at 2134.811 kb on + strand at 2134.846 kb on + strand at 2134.846 kb on + strand at 2134.847 kb on - strand at 2135.217 kb on + strand, within QEN71_RS09540 at 2135.217 kb on + strand, within QEN71_RS09540 at 2135.218 kb on - strand, within QEN71_RS09540 at 2135.218 kb on - strand, within QEN71_RS09540 at 2135.218 kb on - strand, within QEN71_RS09540 at 2135.218 kb on - strand, within QEN71_RS09540 at 2135.229 kb on + strand, within QEN71_RS09540 at 2135.229 kb on + strand, within QEN71_RS09540 at 2135.229 kb on + strand, within QEN71_RS09540 at 2135.229 kb on + strand, within QEN71_RS09540 at 2135.230 kb on - strand, within QEN71_RS09540 at 2135.306 kb on + strand at 2135.306 kb on + strand at 2135.307 kb on - strand at 2135.337 kb on + strand at 2135.474 kb on + strand at 2135.474 kb on + strand at 2135.474 kb on + strand at 2135.475 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB_noSalt with Zinc 0.5 mM remove 2,132,470 + +1.8 2,132,544 + QEN71_RS09530 0.12 +0.5 2,132,545 - QEN71_RS09530 0.12 +0.7 2,132,545 - QEN71_RS09530 0.12 +1.1 2,132,556 + QEN71_RS09530 0.14 +1.4 2,132,829 + QEN71_RS09530 0.59 -0.1 2,132,830 - QEN71_RS09530 0.59 +1.1 2,132,895 - QEN71_RS09530 0.70 -0.3 2,133,016 + QEN71_RS09530 0.89 +0.4 2,133,016 + QEN71_RS09530 0.89 +0.2 2,133,016 + QEN71_RS09530 0.89 -0.4 2,133,017 - QEN71_RS09530 0.90 +0.8 2,133,042 - +0.4 2,133,109 - +0.8 2,133,195 + -0.1 2,133,195 + +1.6 2,133,330 - +0.5 2,133,443 - +0.8 2,133,768 + QEN71_RS09535 0.32 +0.3 2,133,769 - QEN71_RS09535 0.32 +1.3 2,133,791 + QEN71_RS09535 0.34 +0.9 2,133,810 + QEN71_RS09535 0.36 +1.5 2,133,810 + QEN71_RS09535 0.36 +1.1 2,133,810 + QEN71_RS09535 0.36 +1.5 2,133,870 + QEN71_RS09535 0.41 +1.5 2,133,885 + QEN71_RS09535 0.42 +0.9 2,134,023 + QEN71_RS09535 0.55 +1.0 2,134,024 - QEN71_RS09535 0.55 +0.4 2,134,024 - QEN71_RS09535 0.55 +1.0 2,134,035 + QEN71_RS09535 0.56 +0.9 2,134,035 + QEN71_RS09535 0.56 +0.8 2,134,036 - QEN71_RS09535 0.56 +1.2 2,134,036 - QEN71_RS09535 0.56 +0.5 2,134,168 - QEN71_RS09535 0.67 +0.4 2,134,263 + QEN71_RS09535 0.76 +1.8 2,134,264 - QEN71_RS09535 0.76 -0.8 2,134,281 + QEN71_RS09535 0.77 +1.5 2,134,281 + QEN71_RS09535 0.77 +0.0 2,134,282 - QEN71_RS09535 0.78 +0.8 2,134,282 - QEN71_RS09535 0.78 +0.6 2,134,282 - QEN71_RS09535 0.78 +0.7 2,134,317 + QEN71_RS09535 0.81 +1.2 2,134,317 + QEN71_RS09535 0.81 +1.7 2,134,377 + QEN71_RS09535 0.86 +0.9 2,134,377 + QEN71_RS09535 0.86 +1.3 2,134,377 + QEN71_RS09535 0.86 -1.3 2,134,377 + QEN71_RS09535 0.86 +1.1 2,134,378 - QEN71_RS09535 0.86 +0.8 2,134,404 + QEN71_RS09535 0.88 +1.1 2,134,419 + QEN71_RS09535 0.90 +1.1 2,134,419 + QEN71_RS09535 0.90 +1.3 2,134,419 + QEN71_RS09535 0.90 +1.8 2,134,608 - +0.9 2,134,811 + +0.9 2,134,846 + +1.5 2,134,846 + +1.5 2,134,847 - +1.1 2,135,217 + QEN71_RS09540 0.77 +1.8 2,135,217 + QEN71_RS09540 0.77 +3.1 2,135,218 - QEN71_RS09540 0.77 +1.7 2,135,218 - QEN71_RS09540 0.77 +1.5 2,135,218 - QEN71_RS09540 0.77 -0.3 2,135,218 - QEN71_RS09540 0.77 +1.6 2,135,229 + QEN71_RS09540 0.79 +3.1 2,135,229 + QEN71_RS09540 0.79 +1.7 2,135,229 + QEN71_RS09540 0.79 +2.7 2,135,229 + QEN71_RS09540 0.79 +1.9 2,135,230 - QEN71_RS09540 0.79 +0.7 2,135,306 + +3.1 2,135,306 + +3.2 2,135,307 - +1.6 2,135,337 + +3.4 2,135,474 + +3.2 2,135,474 + +3.4 2,135,474 + +3.4 2,135,475 - +2.6
Or see this region's nucleotide sequence