Experiment: LB_noSalt with Zinc 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS02535 and QEN71_RS02540 are separated by 101 nucleotides QEN71_RS02540 and QEN71_RS02545 are separated by 73 nucleotides QEN71_RS02545 and QEN71_RS02550 are separated by 419 nucleotides
QEN71_RS02535: QEN71_RS02535 - hypothetical protein, at 569,219 to 569,464
_RS02535
QEN71_RS02540: QEN71_RS02540 - DNA-binding protein, at 569,566 to 570,090
_RS02540
QEN71_RS02545: QEN71_RS02545 - nucleobase:cation symporter-2 family protein, at 570,164 to 571,579
_RS02545
QEN71_RS02550: QEN71_RS02550 - FGGY family carbohydrate kinase, at 571,999 to 573,423
_RS02550
Position (kb) 570
571
572 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 569.201 kb on + strand at 569.201 kb on + strand at 569.204 kb on - strand at 569.204 kb on - strand at 569.204 kb on - strand at 569.204 kb on - strand at 569.333 kb on + strand, within QEN71_RS02535 at 569.333 kb on + strand, within QEN71_RS02535 at 569.333 kb on + strand, within QEN71_RS02535 at 569.333 kb on + strand, within QEN71_RS02535 at 569.333 kb on + strand, within QEN71_RS02535 at 569.333 kb on + strand, within QEN71_RS02535 at 569.333 kb on + strand, within QEN71_RS02535 at 569.333 kb on + strand, within QEN71_RS02535 at 569.333 kb on + strand, within QEN71_RS02535 at 569.333 kb on + strand, within QEN71_RS02535 at 569.333 kb on + strand, within QEN71_RS02535 at 569.333 kb on + strand, within QEN71_RS02535 at 569.333 kb on + strand, within QEN71_RS02535 at 569.333 kb on + strand, within QEN71_RS02535 at 569.334 kb on - strand, within QEN71_RS02535 at 569.334 kb on - strand, within QEN71_RS02535 at 569.334 kb on - strand, within QEN71_RS02535 at 569.334 kb on - strand, within QEN71_RS02535 at 569.334 kb on - strand, within QEN71_RS02535 at 569.334 kb on - strand, within QEN71_RS02535 at 569.334 kb on - strand, within QEN71_RS02535 at 569.334 kb on - strand, within QEN71_RS02535 at 569.334 kb on - strand, within QEN71_RS02535 at 569.334 kb on - strand, within QEN71_RS02535 at 569.334 kb on - strand, within QEN71_RS02535 at 569.334 kb on - strand, within QEN71_RS02535 at 569.342 kb on + strand, within QEN71_RS02535 at 569.380 kb on + strand, within QEN71_RS02535 at 569.380 kb on + strand, within QEN71_RS02535 at 569.386 kb on + strand, within QEN71_RS02535 at 569.386 kb on + strand, within QEN71_RS02535 at 569.386 kb on + strand, within QEN71_RS02535 at 569.387 kb on - strand, within QEN71_RS02535 at 569.387 kb on - strand, within QEN71_RS02535 at 569.387 kb on - strand, within QEN71_RS02535 at 569.395 kb on + strand, within QEN71_RS02535 at 569.396 kb on - strand, within QEN71_RS02535 at 569.396 kb on - strand, within QEN71_RS02535 at 569.396 kb on - strand, within QEN71_RS02535 at 569.481 kb on + strand at 569.482 kb on - strand at 569.565 kb on + strand at 569.565 kb on + strand at 569.565 kb on + strand at 569.566 kb on - strand at 569.566 kb on - strand at 569.573 kb on - strand at 569.573 kb on - strand at 569.971 kb on + strand, within QEN71_RS02540 at 569.971 kb on + strand, within QEN71_RS02540 at 569.971 kb on + strand, within QEN71_RS02540 at 569.971 kb on + strand, within QEN71_RS02540 at 570.165 kb on + strand at 570.166 kb on - strand at 570.166 kb on - strand at 570.166 kb on - strand at 570.458 kb on + strand, within QEN71_RS02545 at 571.068 kb on + strand, within QEN71_RS02545 at 571.068 kb on + strand, within QEN71_RS02545 at 571.068 kb on + strand, within QEN71_RS02545 at 571.069 kb on - strand, within QEN71_RS02545 at 571.069 kb on - strand, within QEN71_RS02545 at 571.069 kb on - strand, within QEN71_RS02545 at 571.083 kb on + strand, within QEN71_RS02545 at 571.117 kb on + strand, within QEN71_RS02545 at 571.117 kb on + strand, within QEN71_RS02545 at 571.117 kb on + strand, within QEN71_RS02545 at 571.117 kb on + strand, within QEN71_RS02545 at 571.117 kb on + strand, within QEN71_RS02545 at 571.117 kb on + strand, within QEN71_RS02545 at 571.118 kb on - strand, within QEN71_RS02545 at 571.118 kb on - strand, within QEN71_RS02545 at 571.118 kb on - strand, within QEN71_RS02545 at 571.118 kb on - strand, within QEN71_RS02545 at 571.491 kb on + strand at 571.491 kb on + strand at 571.491 kb on + strand at 571.491 kb on + strand at 571.491 kb on + strand at 571.491 kb on + strand at 571.491 kb on + strand at 571.491 kb on + strand at 571.491 kb on + strand at 571.491 kb on + strand at 571.491 kb on + strand at 571.491 kb on + strand at 571.491 kb on + strand at 571.491 kb on + strand at 571.491 kb on + strand at 571.491 kb on + strand at 571.491 kb on + strand at 571.491 kb on + strand at 571.491 kb on + strand at 571.491 kb on + strand at 571.491 kb on + strand at 571.491 kb on + strand at 571.491 kb on + strand at 571.491 kb on + strand at 571.491 kb on + strand at 571.491 kb on + strand at 571.491 kb on + strand at 571.492 kb on - strand at 571.492 kb on - strand at 571.492 kb on - strand at 571.492 kb on - strand at 571.492 kb on - strand at 571.492 kb on - strand at 571.492 kb on - strand at 571.492 kb on - strand at 571.492 kb on - strand at 571.492 kb on - strand at 571.492 kb on - strand at 571.492 kb on - strand at 571.492 kb on - strand at 571.492 kb on - strand at 571.492 kb on - strand at 571.492 kb on - strand at 571.492 kb on - strand at 571.492 kb on - strand at 571.492 kb on - strand at 571.492 kb on - strand at 571.492 kb on - strand at 571.492 kb on - strand at 571.492 kb on - strand at 571.492 kb on - strand at 571.492 kb on - strand at 571.492 kb on - strand at 571.492 kb on - strand at 571.492 kb on - strand at 571.492 kb on - strand at 571.492 kb on - strand at 571.502 kb on + strand at 571.502 kb on + strand at 571.502 kb on + strand at 571.502 kb on + strand at 571.502 kb on + strand at 571.502 kb on + strand at 571.503 kb on - strand at 571.503 kb on - strand at 571.503 kb on - strand at 571.503 kb on - strand at 571.503 kb on - strand at 571.620 kb on + strand at 571.620 kb on + strand at 571.621 kb on - strand at 571.621 kb on - strand at 571.658 kb on + strand at 571.658 kb on + strand at 571.658 kb on + strand at 571.659 kb on - strand at 571.659 kb on - strand at 571.681 kb on + strand at 571.681 kb on + strand at 571.681 kb on + strand at 571.682 kb on - strand at 571.682 kb on - strand at 571.745 kb on + strand at 571.746 kb on - strand at 571.746 kb on - strand at 571.797 kb on + strand at 571.797 kb on + strand at 571.797 kb on + strand at 571.797 kb on + strand at 571.797 kb on + strand at 571.797 kb on + strand at 571.797 kb on + strand at 571.797 kb on + strand at 571.797 kb on + strand at 571.797 kb on + strand at 571.798 kb on - strand at 571.798 kb on - strand at 571.798 kb on - strand at 571.798 kb on - strand at 571.798 kb on - strand at 571.798 kb on - strand at 571.798 kb on - strand at 571.798 kb on - strand at 571.798 kb on - strand at 571.798 kb on - strand at 571.798 kb on - strand at 571.798 kb on - strand at 571.798 kb on - strand at 571.798 kb on - strand at 571.798 kb on - strand at 571.799 kb on + strand at 571.799 kb on + strand at 571.799 kb on + strand at 571.799 kb on + strand at 571.799 kb on + strand at 571.799 kb on + strand at 571.800 kb on - strand at 571.809 kb on + strand at 571.810 kb on - strand at 571.810 kb on - strand at 571.810 kb on - strand at 571.810 kb on - strand at 571.810 kb on - strand at 571.810 kb on - strand at 571.810 kb on - strand at 571.810 kb on - strand at 571.810 kb on - strand at 571.810 kb on - strand at 571.818 kb on + strand at 571.818 kb on + strand at 571.818 kb on + strand at 571.818 kb on + strand at 571.818 kb on + strand at 571.818 kb on + strand at 571.818 kb on + strand at 571.819 kb on - strand at 571.819 kb on - strand at 571.819 kb on - strand at 571.819 kb on - strand at 571.834 kb on + strand at 571.834 kb on + strand at 571.834 kb on + strand at 571.834 kb on + strand at 571.835 kb on - strand at 571.835 kb on - strand at 571.835 kb on - strand at 571.835 kb on - strand at 571.835 kb on - strand at 571.835 kb on - strand at 571.835 kb on - strand at 571.835 kb on - strand at 571.835 kb on - strand at 571.835 kb on - strand at 571.835 kb on - strand at 571.960 kb on - strand at 571.980 kb on + strand at 571.980 kb on + strand at 571.980 kb on + strand at 571.980 kb on + strand at 571.981 kb on - strand at 572.025 kb on + strand at 572.025 kb on + strand at 572.026 kb on - strand at 572.026 kb on - strand at 572.092 kb on + strand at 572.093 kb on - strand at 572.093 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB_noSalt with Zinc 0.5 mM remove 569,201 + -0.6 569,201 + +1.2 569,204 - +0.2 569,204 - -0.0 569,204 - +0.2 569,204 - -0.7 569,333 + QEN71_RS02535 0.46 -0.6 569,333 + QEN71_RS02535 0.46 -0.9 569,333 + QEN71_RS02535 0.46 -0.3 569,333 + QEN71_RS02535 0.46 -0.8 569,333 + QEN71_RS02535 0.46 -0.1 569,333 + QEN71_RS02535 0.46 -0.4 569,333 + QEN71_RS02535 0.46 +0.6 569,333 + QEN71_RS02535 0.46 +0.0 569,333 + QEN71_RS02535 0.46 -0.4 569,333 + QEN71_RS02535 0.46 -0.8 569,333 + QEN71_RS02535 0.46 +1.2 569,333 + QEN71_RS02535 0.46 -0.1 569,333 + QEN71_RS02535 0.46 -0.6 569,333 + QEN71_RS02535 0.46 -0.5 569,334 - QEN71_RS02535 0.47 -1.1 569,334 - QEN71_RS02535 0.47 -0.3 569,334 - QEN71_RS02535 0.47 +0.2 569,334 - QEN71_RS02535 0.47 +0.0 569,334 - QEN71_RS02535 0.47 -0.4 569,334 - QEN71_RS02535 0.47 -0.6 569,334 - QEN71_RS02535 0.47 -0.8 569,334 - QEN71_RS02535 0.47 -1.3 569,334 - QEN71_RS02535 0.47 +0.1 569,334 - QEN71_RS02535 0.47 -0.5 569,334 - QEN71_RS02535 0.47 +1.2 569,334 - QEN71_RS02535 0.47 +0.8 569,342 + QEN71_RS02535 0.50 -0.6 569,380 + QEN71_RS02535 0.65 -0.3 569,380 + QEN71_RS02535 0.65 +0.4 569,386 + QEN71_RS02535 0.68 +0.4 569,386 + QEN71_RS02535 0.68 -0.3 569,386 + QEN71_RS02535 0.68 -0.2 569,387 - QEN71_RS02535 0.68 +0.2 569,387 - QEN71_RS02535 0.68 -0.0 569,387 - QEN71_RS02535 0.68 +0.1 569,395 + QEN71_RS02535 0.72 -0.1 569,396 - QEN71_RS02535 0.72 -0.3 569,396 - QEN71_RS02535 0.72 -1.4 569,396 - QEN71_RS02535 0.72 -2.6 569,481 + +0.5 569,482 - -1.1 569,565 + -0.7 569,565 + -0.9 569,565 + +0.2 569,566 - -1.3 569,566 - -0.4 569,573 - -0.9 569,573 - -0.2 569,971 + QEN71_RS02540 0.77 +1.3 569,971 + QEN71_RS02540 0.77 -0.8 569,971 + QEN71_RS02540 0.77 +0.2 569,971 + QEN71_RS02540 0.77 -0.4 570,165 + +2.5 570,166 - -1.5 570,166 - +0.2 570,166 - -2.1 570,458 + QEN71_RS02545 0.21 -0.9 571,068 + QEN71_RS02545 0.64 +0.3 571,068 + QEN71_RS02545 0.64 -0.7 571,068 + QEN71_RS02545 0.64 +0.3 571,069 - QEN71_RS02545 0.64 -0.5 571,069 - QEN71_RS02545 0.64 +0.1 571,069 - QEN71_RS02545 0.64 -1.6 571,083 + QEN71_RS02545 0.65 +0.9 571,117 + QEN71_RS02545 0.67 +0.3 571,117 + QEN71_RS02545 0.67 -0.3 571,117 + QEN71_RS02545 0.67 +0.2 571,117 + QEN71_RS02545 0.67 -0.3 571,117 + QEN71_RS02545 0.67 +0.3 571,117 + QEN71_RS02545 0.67 -1.0 571,118 - QEN71_RS02545 0.67 -0.1 571,118 - QEN71_RS02545 0.67 +0.6 571,118 - QEN71_RS02545 0.67 -0.9 571,118 - QEN71_RS02545 0.67 +0.2 571,491 + +0.2 571,491 + +0.8 571,491 + -0.4 571,491 + -2.2 571,491 + -0.4 571,491 + +1.4 571,491 + +0.3 571,491 + -0.2 571,491 + +0.2 571,491 + +0.0 571,491 + -0.4 571,491 + -0.7 571,491 + -0.8 571,491 + -0.3 571,491 + +0.5 571,491 + -0.9 571,491 + -0.5 571,491 + -0.1 571,491 + -0.4 571,491 + +1.6 571,491 + -0.7 571,491 + +0.7 571,491 + +0.2 571,491 + -0.4 571,491 + -1.5 571,491 + -0.3 571,491 + +0.6 571,492 - -0.6 571,492 - +0.5 571,492 - +0.2 571,492 - -1.1 571,492 - -1.0 571,492 - -1.1 571,492 - -0.3 571,492 - -0.6 571,492 - -0.5 571,492 - -0.1 571,492 - -0.1 571,492 - -0.6 571,492 - -0.4 571,492 - -0.8 571,492 - -0.3 571,492 - -0.0 571,492 - -1.0 571,492 - -0.6 571,492 - +1.8 571,492 - +0.6 571,492 - +0.7 571,492 - +0.6 571,492 - -3.4 571,492 - -0.7 571,492 - -0.5 571,492 - -0.4 571,492 - +0.2 571,492 - +0.4 571,492 - +0.0 571,492 - +0.2 571,502 + +2.2 571,502 + -0.1 571,502 + -0.8 571,502 + -0.6 571,502 + +1.2 571,502 + -0.4 571,503 - -0.1 571,503 - -0.7 571,503 - +0.6 571,503 - -0.5 571,503 - +0.5 571,620 + -0.0 571,620 + -0.4 571,621 - -0.2 571,621 - -0.1 571,658 + +1.0 571,658 + +0.4 571,658 + +0.8 571,659 - -0.4 571,659 - -0.2 571,681 + -0.4 571,681 + +0.4 571,681 + +1.6 571,682 - +0.6 571,682 - -0.4 571,745 + -1.0 571,746 - +0.5 571,746 - +0.0 571,797 + -0.8 571,797 + -0.6 571,797 + -0.5 571,797 + +0.1 571,797 + -0.1 571,797 + -1.3 571,797 + +0.1 571,797 + +0.6 571,797 + -0.0 571,797 + +0.2 571,798 - -0.3 571,798 - -0.1 571,798 - -0.4 571,798 - +0.2 571,798 - +1.1 571,798 - -0.5 571,798 - -0.4 571,798 - +0.0 571,798 - -0.4 571,798 - -0.1 571,798 - +1.5 571,798 - -0.8 571,798 - -1.3 571,798 - -0.8 571,798 - +2.4 571,799 + -0.5 571,799 + -1.3 571,799 + -1.0 571,799 + +0.3 571,799 + -0.4 571,799 + -0.8 571,800 - +1.0 571,809 + -1.0 571,810 - +0.5 571,810 - -0.6 571,810 - -0.7 571,810 - -1.8 571,810 - +0.4 571,810 - -0.2 571,810 - -1.2 571,810 - -0.4 571,810 - -0.6 571,810 - -0.3 571,818 + -1.4 571,818 + -0.0 571,818 + -0.8 571,818 + -0.1 571,818 + -2.4 571,818 + -0.4 571,818 + -0.0 571,819 - -0.3 571,819 - -0.1 571,819 - +0.2 571,819 - -1.6 571,834 + -1.2 571,834 + -0.4 571,834 + -0.6 571,834 + -2.0 571,835 - -0.5 571,835 - -0.5 571,835 - -0.2 571,835 - -0.6 571,835 - +0.0 571,835 - -0.0 571,835 - -0.3 571,835 - +0.4 571,835 - +0.4 571,835 - -0.6 571,835 - +0.8 571,960 - -0.7 571,980 + -1.5 571,980 + +1.8 571,980 + -0.1 571,980 + -1.0 571,981 - -2.0 572,025 + -0.5 572,025 + -1.1 572,026 - -0.6 572,026 - -0.1 572,092 + -0.2 572,093 - -0.3 572,093 - +0.1
Or see this region's nucleotide sequence