Experiment: LB_noSalt with Zinc 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS00735 and QEN71_RS00740 are separated by 6 nucleotides QEN71_RS00740 and QEN71_RS00745 are separated by 636 nucleotides QEN71_RS00745 and QEN71_RS00750 overlap by 4 nucleotides
QEN71_RS00735: QEN71_RS00735 - IS21-like element helper ATPase IstB, at 166,799 to 167,587
_RS00735
QEN71_RS00740: QEN71_RS00740 - IS21 family transposase, at 167,594 to 169,117
_RS00740
QEN71_RS00745: QEN71_RS00745 - hypothetical protein, at 169,754 to 169,999
_RS00745
QEN71_RS00750: QEN71_RS00750 - hypothetical protein, at 169,996 to 170,217
_RS00750
Position (kb) 167
168
169
170 Strain fitness (log2 ratio) -2
-1
0
1 at 166.612 kb on + strand at 166.613 kb on - strand at 166.666 kb on + strand at 166.666 kb on + strand at 166.666 kb on + strand at 166.666 kb on + strand at 166.667 kb on - strand at 166.667 kb on - strand at 166.667 kb on - strand at 166.667 kb on - strand at 166.691 kb on + strand at 166.691 kb on + strand at 166.691 kb on + strand at 166.691 kb on + strand at 166.692 kb on - strand at 166.692 kb on - strand at 166.692 kb on - strand at 166.692 kb on - strand at 166.692 kb on - strand at 166.703 kb on + strand at 166.707 kb on + strand at 166.707 kb on + strand at 166.707 kb on + strand at 166.707 kb on + strand at 166.707 kb on + strand at 166.707 kb on + strand at 166.708 kb on - strand at 166.708 kb on - strand at 166.708 kb on - strand at 169.366 kb on + strand at 169.366 kb on + strand at 169.425 kb on + strand at 169.425 kb on + strand at 169.425 kb on + strand at 169.426 kb on - strand at 169.426 kb on - strand at 169.432 kb on + strand at 169.432 kb on + strand at 169.433 kb on - strand at 169.433 kb on - strand at 169.504 kb on + strand at 169.504 kb on + strand at 169.504 kb on + strand at 169.505 kb on - strand at 169.505 kb on - strand at 169.505 kb on - strand at 169.505 kb on - strand at 169.528 kb on - strand at 169.528 kb on - strand at 169.584 kb on + strand at 169.598 kb on - strand at 169.598 kb on - strand at 169.695 kb on + strand at 169.695 kb on + strand at 169.695 kb on + strand at 169.698 kb on + strand at 169.698 kb on + strand at 169.698 kb on + strand at 169.699 kb on - strand at 169.699 kb on - strand at 169.776 kb on - strand at 169.778 kb on + strand at 169.778 kb on + strand at 169.778 kb on + strand at 169.779 kb on - strand, within QEN71_RS00745 at 169.779 kb on - strand, within QEN71_RS00745 at 169.779 kb on - strand, within QEN71_RS00745 at 169.779 kb on - strand, within QEN71_RS00745 at 169.779 kb on - strand, within QEN71_RS00745 at 169.842 kb on + strand, within QEN71_RS00745 at 169.842 kb on + strand, within QEN71_RS00745 at 169.843 kb on - strand, within QEN71_RS00745 at 169.843 kb on - strand, within QEN71_RS00745 at 169.843 kb on - strand, within QEN71_RS00745 at 169.843 kb on - strand, within QEN71_RS00745 at 170.064 kb on + strand, within QEN71_RS00750 at 170.064 kb on + strand, within QEN71_RS00750 at 170.065 kb on - strand, within QEN71_RS00750 at 170.065 kb on - strand, within QEN71_RS00750
Per-strain Table
Position Strand Gene LocusTag Fraction LB_noSalt with Zinc 0.5 mM remove 166,612 + -0.1 166,613 - -0.5 166,666 + -0.4 166,666 + +0.2 166,666 + +0.0 166,666 + +0.4 166,667 - -0.1 166,667 - +0.6 166,667 - +0.3 166,667 - -0.1 166,691 + +0.2 166,691 + -0.9 166,691 + -0.1 166,691 + -0.4 166,692 - +0.2 166,692 - -0.4 166,692 - +0.1 166,692 - +0.2 166,692 - -0.0 166,703 + +1.2 166,707 + +0.1 166,707 + -0.3 166,707 + -2.5 166,707 + +0.5 166,707 + +1.7 166,707 + -0.2 166,708 - -0.3 166,708 - +0.5 166,708 - -0.2 169,366 + -0.9 169,366 + +0.4 169,425 + -0.5 169,425 + -1.2 169,425 + -0.1 169,426 - +0.9 169,426 - -0.4 169,432 + +0.3 169,432 + +1.4 169,433 - -0.4 169,433 - -0.6 169,504 + -0.3 169,504 + -1.0 169,504 + -1.0 169,505 - -0.7 169,505 - -0.3 169,505 - -0.4 169,505 - -1.1 169,528 - -0.4 169,528 - -1.4 169,584 + +1.0 169,598 - -1.3 169,598 - -0.1 169,695 + -0.2 169,695 + -1.6 169,695 + +0.3 169,698 + -0.4 169,698 + -2.7 169,698 + -0.3 169,699 - -1.3 169,699 - -1.0 169,776 - -0.4 169,778 + -0.0 169,778 + -1.2 169,778 + -1.5 169,779 - QEN71_RS00745 0.10 +0.6 169,779 - QEN71_RS00745 0.10 +0.0 169,779 - QEN71_RS00745 0.10 +1.0 169,779 - QEN71_RS00745 0.10 -2.7 169,779 - QEN71_RS00745 0.10 -0.4 169,842 + QEN71_RS00745 0.36 -0.8 169,842 + QEN71_RS00745 0.36 -0.2 169,843 - QEN71_RS00745 0.36 +0.0 169,843 - QEN71_RS00745 0.36 -0.3 169,843 - QEN71_RS00745 0.36 -0.1 169,843 - QEN71_RS00745 0.36 -0.1 170,064 + QEN71_RS00750 0.31 +0.6 170,064 + QEN71_RS00750 0.31 -0.6 170,065 - QEN71_RS00750 0.31 -0.8 170,065 - QEN71_RS00750 0.31 -1.8
Or see this region's nucleotide sequence