Experiment: LB_noSalt with Zinc 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS00690 and QEN71_RS00695 are separated by 3 nucleotides QEN71_RS00695 and QEN71_RS00700 are separated by 3 nucleotides
QEN71_RS00690: QEN71_RS00690 - DEAD/DEAH box helicase, at 146,102 to 151,267
_RS00690
QEN71_RS00695: QEN71_RS00695 - DEAD/DEAH box helicase, at 151,271 to 154,036
_RS00695
QEN71_RS00700: QEN71_RS00700 - N-6 DNA methylase, at 154,040 to 157,948
_RS00700
Position (kb) 151
152
153
154
155 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 150.353 kb on - strand, within QEN71_RS00690 at 150.353 kb on - strand, within QEN71_RS00690 at 150.373 kb on + strand, within QEN71_RS00690 at 150.373 kb on + strand, within QEN71_RS00690 at 150.373 kb on + strand, within QEN71_RS00690 at 150.403 kb on + strand, within QEN71_RS00690 at 150.403 kb on + strand, within QEN71_RS00690 at 150.404 kb on - strand, within QEN71_RS00690 at 150.418 kb on + strand, within QEN71_RS00690 at 150.418 kb on + strand, within QEN71_RS00690 at 150.418 kb on + strand, within QEN71_RS00690 at 150.418 kb on + strand, within QEN71_RS00690 at 150.419 kb on - strand, within QEN71_RS00690 at 150.419 kb on - strand, within QEN71_RS00690 at 150.419 kb on - strand, within QEN71_RS00690 at 150.419 kb on - strand, within QEN71_RS00690 at 150.419 kb on - strand, within QEN71_RS00690 at 150.419 kb on - strand, within QEN71_RS00690 at 150.421 kb on + strand, within QEN71_RS00690 at 150.441 kb on - strand, within QEN71_RS00690 at 150.441 kb on - strand, within QEN71_RS00690 at 150.518 kb on - strand, within QEN71_RS00690 at 150.546 kb on + strand, within QEN71_RS00690 at 150.547 kb on - strand, within QEN71_RS00690 at 150.573 kb on + strand, within QEN71_RS00690 at 150.573 kb on + strand, within QEN71_RS00690 at 150.704 kb on + strand, within QEN71_RS00690 at 150.705 kb on - strand, within QEN71_RS00690 at 150.705 kb on - strand, within QEN71_RS00690 at 150.813 kb on + strand at 150.813 kb on + strand at 150.813 kb on + strand at 150.814 kb on - strand at 150.814 kb on - strand at 150.814 kb on - strand at 150.814 kb on - strand at 150.814 kb on - strand at 150.814 kb on - strand at 150.856 kb on + strand at 150.857 kb on - strand at 150.857 kb on - strand at 150.862 kb on + strand at 150.905 kb on + strand at 150.905 kb on + strand at 150.906 kb on - strand at 150.906 kb on - strand at 150.996 kb on + strand at 150.996 kb on + strand at 150.997 kb on - strand at 150.997 kb on - strand at 151.112 kb on + strand at 151.112 kb on + strand at 151.127 kb on + strand at 151.127 kb on + strand at 151.127 kb on + strand at 151.128 kb on - strand at 151.265 kb on + strand at 151.265 kb on + strand at 151.265 kb on + strand at 151.266 kb on - strand at 151.450 kb on - strand at 151.506 kb on + strand at 151.506 kb on + strand at 151.507 kb on - strand at 151.518 kb on + strand at 151.518 kb on + strand at 151.518 kb on + strand at 151.519 kb on - strand at 151.577 kb on + strand, within QEN71_RS00695 at 151.578 kb on - strand, within QEN71_RS00695 at 151.889 kb on + strand, within QEN71_RS00695 at 151.889 kb on + strand, within QEN71_RS00695 at 151.889 kb on + strand, within QEN71_RS00695 at 151.890 kb on - strand, within QEN71_RS00695 at 151.890 kb on - strand, within QEN71_RS00695 at 151.890 kb on - strand, within QEN71_RS00695 at 151.890 kb on - strand, within QEN71_RS00695 at 152.010 kb on + strand, within QEN71_RS00695 at 152.150 kb on + strand, within QEN71_RS00695 at 152.191 kb on + strand, within QEN71_RS00695 at 152.192 kb on - strand, within QEN71_RS00695 at 152.192 kb on - strand, within QEN71_RS00695 at 152.192 kb on - strand, within QEN71_RS00695 at 152.229 kb on + strand, within QEN71_RS00695 at 152.310 kb on - strand, within QEN71_RS00695 at 152.310 kb on - strand, within QEN71_RS00695 at 152.477 kb on + strand, within QEN71_RS00695 at 152.477 kb on + strand, within QEN71_RS00695 at 152.477 kb on + strand, within QEN71_RS00695 at 152.477 kb on + strand, within QEN71_RS00695 at 152.477 kb on + strand, within QEN71_RS00695 at 152.477 kb on + strand, within QEN71_RS00695 at 152.477 kb on + strand, within QEN71_RS00695 at 152.478 kb on - strand, within QEN71_RS00695 at 152.478 kb on - strand, within QEN71_RS00695 at 152.478 kb on - strand, within QEN71_RS00695 at 152.478 kb on - strand, within QEN71_RS00695 at 152.478 kb on - strand, within QEN71_RS00695 at 152.478 kb on - strand, within QEN71_RS00695 at 152.478 kb on - strand, within QEN71_RS00695 at 152.589 kb on + strand, within QEN71_RS00695 at 152.690 kb on + strand, within QEN71_RS00695 at 152.690 kb on + strand, within QEN71_RS00695 at 152.691 kb on - strand, within QEN71_RS00695 at 152.691 kb on - strand, within QEN71_RS00695 at 152.847 kb on + strand, within QEN71_RS00695 at 152.847 kb on + strand, within QEN71_RS00695 at 152.848 kb on - strand, within QEN71_RS00695 at 152.848 kb on - strand, within QEN71_RS00695 at 152.848 kb on - strand, within QEN71_RS00695 at 152.881 kb on + strand, within QEN71_RS00695 at 152.894 kb on + strand, within QEN71_RS00695 at 152.895 kb on - strand, within QEN71_RS00695 at 153.307 kb on + strand, within QEN71_RS00695 at 153.307 kb on + strand, within QEN71_RS00695 at 153.307 kb on + strand, within QEN71_RS00695 at 153.307 kb on + strand, within QEN71_RS00695 at 153.308 kb on - strand, within QEN71_RS00695 at 153.697 kb on + strand, within QEN71_RS00695 at 153.698 kb on - strand, within QEN71_RS00695 at 153.765 kb on + strand at 153.765 kb on + strand at 153.850 kb on + strand at 153.851 kb on - strand at 153.851 kb on - strand at 153.893 kb on + strand at 153.893 kb on + strand at 153.893 kb on + strand at 153.893 kb on + strand at 153.893 kb on + strand at 153.893 kb on + strand at 153.894 kb on - strand at 153.894 kb on - strand at 153.894 kb on - strand at 153.894 kb on - strand at 153.894 kb on - strand at 153.894 kb on - strand at 153.894 kb on - strand at 154.018 kb on + strand at 154.018 kb on + strand at 154.019 kb on - strand at 154.019 kb on - strand at 154.034 kb on + strand at 154.034 kb on + strand at 154.034 kb on + strand at 154.034 kb on + strand at 154.034 kb on + strand at 154.035 kb on - strand at 154.035 kb on - strand at 154.035 kb on - strand at 154.035 kb on - strand at 154.035 kb on - strand at 154.071 kb on + strand at 154.072 kb on - strand at 154.072 kb on - strand at 154.302 kb on + strand at 154.303 kb on - strand at 154.329 kb on + strand at 154.329 kb on + strand at 154.329 kb on + strand at 154.329 kb on + strand at 154.329 kb on + strand at 154.329 kb on + strand at 154.329 kb on + strand at 154.329 kb on + strand at 154.329 kb on + strand at 154.329 kb on + strand at 154.329 kb on + strand at 154.329 kb on + strand at 154.329 kb on + strand at 154.329 kb on + strand at 154.330 kb on - strand at 154.330 kb on - strand at 154.330 kb on - strand at 154.475 kb on + strand, within QEN71_RS00700 at 154.475 kb on + strand, within QEN71_RS00700 at 154.475 kb on + strand, within QEN71_RS00700 at 154.476 kb on - strand, within QEN71_RS00700 at 154.476 kb on - strand, within QEN71_RS00700 at 154.476 kb on - strand, within QEN71_RS00700 at 154.476 kb on - strand, within QEN71_RS00700 at 154.559 kb on - strand, within QEN71_RS00700 at 154.571 kb on + strand, within QEN71_RS00700 at 154.571 kb on + strand, within QEN71_RS00700 at 154.571 kb on + strand, within QEN71_RS00700 at 154.571 kb on + strand, within QEN71_RS00700 at 154.572 kb on - strand, within QEN71_RS00700 at 154.572 kb on - strand, within QEN71_RS00700 at 154.573 kb on + strand, within QEN71_RS00700 at 154.574 kb on - strand, within QEN71_RS00700 at 154.574 kb on - strand, within QEN71_RS00700 at 154.574 kb on - strand, within QEN71_RS00700 at 154.574 kb on - strand, within QEN71_RS00700 at 154.588 kb on + strand, within QEN71_RS00700 at 154.588 kb on + strand, within QEN71_RS00700 at 154.588 kb on + strand, within QEN71_RS00700 at 154.589 kb on - strand, within QEN71_RS00700 at 154.638 kb on + strand, within QEN71_RS00700 at 154.638 kb on + strand, within QEN71_RS00700 at 154.780 kb on - strand, within QEN71_RS00700 at 154.780 kb on - strand, within QEN71_RS00700 at 154.780 kb on - strand, within QEN71_RS00700 at 154.780 kb on - strand, within QEN71_RS00700 at 154.923 kb on + strand, within QEN71_RS00700 at 154.923 kb on + strand, within QEN71_RS00700 at 154.923 kb on + strand, within QEN71_RS00700 at 154.924 kb on - strand, within QEN71_RS00700 at 154.924 kb on - strand, within QEN71_RS00700 at 154.924 kb on - strand, within QEN71_RS00700 at 154.924 kb on - strand, within QEN71_RS00700 at 154.964 kb on + strand, within QEN71_RS00700 at 154.976 kb on + strand, within QEN71_RS00700 at 154.984 kb on + strand, within QEN71_RS00700 at 154.984 kb on + strand, within QEN71_RS00700 at 154.984 kb on + strand, within QEN71_RS00700 at 154.984 kb on + strand, within QEN71_RS00700 at 154.984 kb on + strand, within QEN71_RS00700 at 154.984 kb on + strand, within QEN71_RS00700 at 154.984 kb on + strand, within QEN71_RS00700 at 154.985 kb on - strand, within QEN71_RS00700 at 154.985 kb on - strand, within QEN71_RS00700
Per-strain Table
Position Strand Gene LocusTag Fraction LB_noSalt with Zinc 0.5 mM remove 150,353 - QEN71_RS00690 0.82 -1.5 150,353 - QEN71_RS00690 0.82 -0.1 150,373 + QEN71_RS00690 0.83 -0.4 150,373 + QEN71_RS00690 0.83 +0.3 150,373 + QEN71_RS00690 0.83 -0.4 150,403 + QEN71_RS00690 0.83 -1.1 150,403 + QEN71_RS00690 0.83 -0.7 150,404 - QEN71_RS00690 0.83 -0.2 150,418 + QEN71_RS00690 0.84 +0.3 150,418 + QEN71_RS00690 0.84 -3.4 150,418 + QEN71_RS00690 0.84 -1.2 150,418 + QEN71_RS00690 0.84 -0.8 150,419 - QEN71_RS00690 0.84 -1.7 150,419 - QEN71_RS00690 0.84 -0.9 150,419 - QEN71_RS00690 0.84 -2.2 150,419 - QEN71_RS00690 0.84 +0.2 150,419 - QEN71_RS00690 0.84 -1.2 150,419 - QEN71_RS00690 0.84 -0.4 150,421 + QEN71_RS00690 0.84 -1.9 150,441 - QEN71_RS00690 0.84 -2.0 150,441 - QEN71_RS00690 0.84 +0.7 150,518 - QEN71_RS00690 0.85 -1.9 150,546 + QEN71_RS00690 0.86 -0.5 150,547 - QEN71_RS00690 0.86 +0.4 150,573 + QEN71_RS00690 0.87 -1.7 150,573 + QEN71_RS00690 0.87 -0.1 150,704 + QEN71_RS00690 0.89 -0.1 150,705 - QEN71_RS00690 0.89 -0.3 150,705 - QEN71_RS00690 0.89 -3.0 150,813 + +0.2 150,813 + -0.3 150,813 + -0.6 150,814 - -0.9 150,814 - -2.4 150,814 - +1.0 150,814 - -0.9 150,814 - +0.0 150,814 - -1.8 150,856 + +0.1 150,857 - +0.2 150,857 - -0.4 150,862 + -0.6 150,905 + -2.5 150,905 + -1.0 150,906 - -2.1 150,906 - +0.2 150,996 + -1.5 150,996 + -0.5 150,997 - +1.7 150,997 - -1.4 151,112 + -0.5 151,112 + -0.3 151,127 + +0.0 151,127 + -0.6 151,127 + -1.2 151,128 - +0.6 151,265 + -0.5 151,265 + -0.4 151,265 + -2.4 151,266 - -0.1 151,450 - +0.0 151,506 + -0.6 151,506 + -0.4 151,507 - +0.2 151,518 + -1.5 151,518 + -2.3 151,518 + -2.2 151,519 - +0.4 151,577 + QEN71_RS00695 0.11 +1.0 151,578 - QEN71_RS00695 0.11 -1.4 151,889 + QEN71_RS00695 0.22 +0.2 151,889 + QEN71_RS00695 0.22 -0.1 151,889 + QEN71_RS00695 0.22 -0.4 151,890 - QEN71_RS00695 0.22 -0.1 151,890 - QEN71_RS00695 0.22 -3.0 151,890 - QEN71_RS00695 0.22 -0.1 151,890 - QEN71_RS00695 0.22 -1.6 152,010 + QEN71_RS00695 0.27 -1.3 152,150 + QEN71_RS00695 0.32 -1.7 152,191 + QEN71_RS00695 0.33 +0.9 152,192 - QEN71_RS00695 0.33 -1.3 152,192 - QEN71_RS00695 0.33 -1.5 152,192 - QEN71_RS00695 0.33 -1.2 152,229 + QEN71_RS00695 0.35 -0.1 152,310 - QEN71_RS00695 0.38 -2.5 152,310 - QEN71_RS00695 0.38 -1.8 152,477 + QEN71_RS00695 0.44 +1.2 152,477 + QEN71_RS00695 0.44 -0.1 152,477 + QEN71_RS00695 0.44 -1.1 152,477 + QEN71_RS00695 0.44 +1.8 152,477 + QEN71_RS00695 0.44 -1.3 152,477 + QEN71_RS00695 0.44 -1.3 152,477 + QEN71_RS00695 0.44 +0.2 152,478 - QEN71_RS00695 0.44 -1.0 152,478 - QEN71_RS00695 0.44 -0.5 152,478 - QEN71_RS00695 0.44 -1.8 152,478 - QEN71_RS00695 0.44 -1.1 152,478 - QEN71_RS00695 0.44 -0.6 152,478 - QEN71_RS00695 0.44 +0.6 152,478 - QEN71_RS00695 0.44 -0.1 152,589 + QEN71_RS00695 0.48 -1.3 152,690 + QEN71_RS00695 0.51 -3.1 152,690 + QEN71_RS00695 0.51 -2.3 152,691 - QEN71_RS00695 0.51 -3.3 152,691 - QEN71_RS00695 0.51 -0.3 152,847 + QEN71_RS00695 0.57 -1.0 152,847 + QEN71_RS00695 0.57 -2.3 152,848 - QEN71_RS00695 0.57 -1.5 152,848 - QEN71_RS00695 0.57 -1.2 152,848 - QEN71_RS00695 0.57 +0.2 152,881 + QEN71_RS00695 0.58 -0.8 152,894 + QEN71_RS00695 0.59 -1.0 152,895 - QEN71_RS00695 0.59 +1.4 153,307 + QEN71_RS00695 0.74 +0.5 153,307 + QEN71_RS00695 0.74 -1.5 153,307 + QEN71_RS00695 0.74 -2.1 153,307 + QEN71_RS00695 0.74 +0.6 153,308 - QEN71_RS00695 0.74 -0.4 153,697 + QEN71_RS00695 0.88 -0.3 153,698 - QEN71_RS00695 0.88 -1.7 153,765 + -1.6 153,765 + +0.0 153,850 + -0.2 153,851 - -0.4 153,851 - -0.3 153,893 + -1.9 153,893 + -0.3 153,893 + -0.1 153,893 + -1.6 153,893 + -1.3 153,893 + -1.0 153,894 - +0.1 153,894 - -0.1 153,894 - -2.3 153,894 - -1.9 153,894 - -3.5 153,894 - -0.5 153,894 - -1.1 154,018 + -0.4 154,018 + -0.5 154,019 - -0.1 154,019 - -0.5 154,034 + -0.1 154,034 + -1.2 154,034 + +0.1 154,034 + -1.6 154,034 + -0.3 154,035 - -1.1 154,035 - -0.6 154,035 - +1.4 154,035 - -1.3 154,035 - -2.6 154,071 + +0.5 154,072 - -1.1 154,072 - +0.1 154,302 + -1.1 154,303 - -1.6 154,329 + -2.1 154,329 + +0.0 154,329 + -0.3 154,329 + +0.2 154,329 + -2.6 154,329 + -1.8 154,329 + -0.7 154,329 + -0.6 154,329 + -1.6 154,329 + -0.6 154,329 + +0.9 154,329 + -1.4 154,329 + -1.4 154,329 + -1.6 154,330 - -1.1 154,330 - -0.5 154,330 - -0.4 154,475 + QEN71_RS00700 0.11 -1.9 154,475 + QEN71_RS00700 0.11 -1.9 154,475 + QEN71_RS00700 0.11 -2.0 154,476 - QEN71_RS00700 0.11 +0.2 154,476 - QEN71_RS00700 0.11 -2.2 154,476 - QEN71_RS00700 0.11 -0.1 154,476 - QEN71_RS00700 0.11 -1.6 154,559 - QEN71_RS00700 0.13 -3.2 154,571 + QEN71_RS00700 0.14 +1.0 154,571 + QEN71_RS00700 0.14 -0.1 154,571 + QEN71_RS00700 0.14 -0.9 154,571 + QEN71_RS00700 0.14 -0.9 154,572 - QEN71_RS00700 0.14 -1.4 154,572 - QEN71_RS00700 0.14 -1.4 154,573 + QEN71_RS00700 0.14 -0.7 154,574 - QEN71_RS00700 0.14 +0.2 154,574 - QEN71_RS00700 0.14 +0.2 154,574 - QEN71_RS00700 0.14 -0.5 154,574 - QEN71_RS00700 0.14 +0.2 154,588 + QEN71_RS00700 0.14 +0.3 154,588 + QEN71_RS00700 0.14 -3.8 154,588 + QEN71_RS00700 0.14 -0.6 154,589 - QEN71_RS00700 0.14 -1.7 154,638 + QEN71_RS00700 0.15 -1.1 154,638 + QEN71_RS00700 0.15 -1.9 154,780 - QEN71_RS00700 0.19 +0.9 154,780 - QEN71_RS00700 0.19 +0.6 154,780 - QEN71_RS00700 0.19 -0.4 154,780 - QEN71_RS00700 0.19 -1.1 154,923 + QEN71_RS00700 0.23 +1.0 154,923 + QEN71_RS00700 0.23 +1.1 154,923 + QEN71_RS00700 0.23 -3.0 154,924 - QEN71_RS00700 0.23 -1.1 154,924 - QEN71_RS00700 0.23 -0.7 154,924 - QEN71_RS00700 0.23 -0.6 154,924 - QEN71_RS00700 0.23 -0.6 154,964 + QEN71_RS00700 0.24 +0.2 154,976 + QEN71_RS00700 0.24 -1.0 154,984 + QEN71_RS00700 0.24 -1.4 154,984 + QEN71_RS00700 0.24 -1.9 154,984 + QEN71_RS00700 0.24 -1.4 154,984 + QEN71_RS00700 0.24 +0.2 154,984 + QEN71_RS00700 0.24 -1.5 154,984 + QEN71_RS00700 0.24 +0.4 154,984 + QEN71_RS00700 0.24 -0.4 154,985 - QEN71_RS00700 0.24 -1.4 154,985 - QEN71_RS00700 0.24 -1.6
Or see this region's nucleotide sequence