Experiment: LB_noSalt with Cobalt chloride 0.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS37105 and QEN71_RS37110 overlap by 11 nucleotides QEN71_RS37110 and QEN71_RS37115 are separated by 11 nucleotides QEN71_RS37115 and QEN71_RS37120 are separated by 66 nucleotides
QEN71_RS37105: QEN71_RS37105 - MmgE/PrpD family protein, at 1,692,273 to 1,693,658
_RS37105
QEN71_RS37110: QEN71_RS37110 - SDR family oxidoreductase, at 1,693,648 to 1,694,433
_RS37110
QEN71_RS37115: QEN71_RS37115 - N-acyl homoserine lactonase family protein, at 1,694,445 to 1,695,245
_RS37115
QEN71_RS37120: QEN71_RS37120 - MFS transporter, at 1,695,312 to 1,696,727
_RS37120
Position (kb)
1693
1694
1695 Strain fitness (log2 ratio)
-2
-1
0
1 at 1692.835 kb on + strand, within QEN71_RS37105 at 1692.835 kb on + strand, within QEN71_RS37105 at 1692.836 kb on - strand, within QEN71_RS37105 at 1692.836 kb on - strand, within QEN71_RS37105 at 1693.183 kb on + strand, within QEN71_RS37105 at 1693.248 kb on + strand, within QEN71_RS37105 at 1693.325 kb on + strand, within QEN71_RS37105 at 1693.326 kb on - strand, within QEN71_RS37105 at 1693.326 kb on - strand, within QEN71_RS37105 at 1693.335 kb on + strand, within QEN71_RS37105 at 1693.336 kb on - strand, within QEN71_RS37105 at 1693.336 kb on - strand, within QEN71_RS37105 at 1693.336 kb on - strand, within QEN71_RS37105 at 1693.459 kb on + strand, within QEN71_RS37105 at 1693.519 kb on + strand, within QEN71_RS37105 at 1693.890 kb on + strand, within QEN71_RS37110 at 1693.891 kb on - strand, within QEN71_RS37110 at 1693.967 kb on + strand, within QEN71_RS37110 at 1694.188 kb on + strand, within QEN71_RS37110 at 1694.255 kb on + strand, within QEN71_RS37110 at 1694.256 kb on - strand, within QEN71_RS37110 at 1694.299 kb on - strand, within QEN71_RS37110 at 1694.433 kb on + strand at 1694.434 kb on - strand at 1694.447 kb on - strand at 1694.608 kb on + strand, within QEN71_RS37115 at 1694.609 kb on - strand, within QEN71_RS37115 at 1694.609 kb on - strand, within QEN71_RS37115 at 1694.609 kb on - strand, within QEN71_RS37115 at 1694.885 kb on - strand, within QEN71_RS37115 at 1694.885 kb on - strand, within QEN71_RS37115 at 1694.954 kb on - strand, within QEN71_RS37115 at 1695.091 kb on + strand, within QEN71_RS37115 at 1695.092 kb on - strand, within QEN71_RS37115 at 1695.092 kb on - strand, within QEN71_RS37115 at 1695.128 kb on - strand, within QEN71_RS37115 at 1695.214 kb on + strand at 1695.215 kb on - strand at 1695.223 kb on + strand at 1695.224 kb on - strand at 1695.294 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB_noSalt with Cobalt chloride 0.25 mM remove 1,692,835 + QEN71_RS37105 0.41 -0.2 1,692,835 + QEN71_RS37105 0.41 -0.8 1,692,836 - QEN71_RS37105 0.41 +1.6 1,692,836 - QEN71_RS37105 0.41 -0.2 1,693,183 + QEN71_RS37105 0.66 -0.8 1,693,248 + QEN71_RS37105 0.70 +0.0 1,693,325 + QEN71_RS37105 0.76 +1.2 1,693,326 - QEN71_RS37105 0.76 -0.4 1,693,326 - QEN71_RS37105 0.76 -0.3 1,693,335 + QEN71_RS37105 0.77 +0.5 1,693,336 - QEN71_RS37105 0.77 +0.1 1,693,336 - QEN71_RS37105 0.77 +0.6 1,693,336 - QEN71_RS37105 0.77 -0.6 1,693,459 + QEN71_RS37105 0.86 -0.7 1,693,519 + QEN71_RS37105 0.90 +0.3 1,693,890 + QEN71_RS37110 0.31 -0.5 1,693,891 - QEN71_RS37110 0.31 +0.8 1,693,967 + QEN71_RS37110 0.41 -1.0 1,694,188 + QEN71_RS37110 0.69 -0.2 1,694,255 + QEN71_RS37110 0.77 -1.8 1,694,256 - QEN71_RS37110 0.77 -0.1 1,694,299 - QEN71_RS37110 0.83 +0.4 1,694,433 + -2.0 1,694,434 - +0.2 1,694,447 - -0.9 1,694,608 + QEN71_RS37115 0.20 -0.8 1,694,609 - QEN71_RS37115 0.20 -0.7 1,694,609 - QEN71_RS37115 0.20 +0.3 1,694,609 - QEN71_RS37115 0.20 -0.6 1,694,885 - QEN71_RS37115 0.55 +0.3 1,694,885 - QEN71_RS37115 0.55 -0.1 1,694,954 - QEN71_RS37115 0.64 +0.0 1,695,091 + QEN71_RS37115 0.81 +0.4 1,695,092 - QEN71_RS37115 0.81 -0.5 1,695,092 - QEN71_RS37115 0.81 +0.4 1,695,128 - QEN71_RS37115 0.85 +0.1 1,695,214 + -0.7 1,695,215 - +0.1 1,695,223 + +0.1 1,695,224 - -0.1 1,695,294 + -1.1
Or see this region's nucleotide sequence