Experiment: LB_noSalt with Cobalt chloride 0.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS34925 and QEN71_RS34930 are separated by 24 nucleotides QEN71_RS34930 and QEN71_RS34935 are separated by 131 nucleotides
QEN71_RS34925: QEN71_RS34925 - DMT family transporter, at 1,171,337 to 1,172,278
_RS34925
QEN71_RS34930: QEN71_RS34930 - LysE family transporter, at 1,172,303 to 1,172,914
_RS34930
QEN71_RS34935: QEN71_RS34935 - transcriptional regulator GcvA, at 1,173,046 to 1,173,954
_RS34935
Position (kb)
1172
1173 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1171.421 kb on + strand at 1171.422 kb on - strand at 1171.422 kb on - strand at 1171.476 kb on + strand, within QEN71_RS34925 at 1171.476 kb on + strand, within QEN71_RS34925 at 1171.476 kb on + strand, within QEN71_RS34925 at 1171.477 kb on - strand, within QEN71_RS34925 at 1171.477 kb on - strand, within QEN71_RS34925 at 1171.477 kb on - strand, within QEN71_RS34925 at 1171.530 kb on - strand, within QEN71_RS34925 at 1171.567 kb on - strand, within QEN71_RS34925 at 1171.567 kb on - strand, within QEN71_RS34925 at 1171.615 kb on + strand, within QEN71_RS34925 at 1171.615 kb on + strand, within QEN71_RS34925 at 1171.640 kb on + strand, within QEN71_RS34925 at 1171.661 kb on + strand, within QEN71_RS34925 at 1171.661 kb on + strand, within QEN71_RS34925 at 1171.662 kb on - strand, within QEN71_RS34925 at 1171.696 kb on - strand, within QEN71_RS34925 at 1171.725 kb on + strand, within QEN71_RS34925 at 1171.725 kb on + strand, within QEN71_RS34925 at 1171.726 kb on - strand, within QEN71_RS34925 at 1171.728 kb on + strand, within QEN71_RS34925 at 1171.728 kb on + strand, within QEN71_RS34925 at 1171.728 kb on + strand, within QEN71_RS34925 at 1171.919 kb on - strand, within QEN71_RS34925 at 1172.147 kb on + strand, within QEN71_RS34925 at 1172.147 kb on + strand, within QEN71_RS34925 at 1172.147 kb on + strand, within QEN71_RS34925 at 1172.179 kb on + strand, within QEN71_RS34925 at 1172.451 kb on + strand, within QEN71_RS34930 at 1172.451 kb on + strand, within QEN71_RS34930 at 1172.452 kb on - strand, within QEN71_RS34930 at 1172.516 kb on + strand, within QEN71_RS34930 at 1172.517 kb on - strand, within QEN71_RS34930 at 1172.517 kb on - strand, within QEN71_RS34930 at 1172.661 kb on + strand, within QEN71_RS34930 at 1172.662 kb on - strand, within QEN71_RS34930 at 1172.662 kb on - strand, within QEN71_RS34930 at 1172.662 kb on - strand, within QEN71_RS34930 at 1172.670 kb on + strand, within QEN71_RS34930 at 1172.671 kb on - strand, within QEN71_RS34930 at 1172.671 kb on - strand, within QEN71_RS34930 at 1172.753 kb on + strand, within QEN71_RS34930 at 1172.803 kb on + strand, within QEN71_RS34930 at 1172.803 kb on + strand, within QEN71_RS34930 at 1172.803 kb on + strand, within QEN71_RS34930 at 1172.804 kb on - strand, within QEN71_RS34930 at 1172.804 kb on - strand, within QEN71_RS34930 at 1172.814 kb on + strand, within QEN71_RS34930 at 1172.814 kb on + strand, within QEN71_RS34930 at 1172.814 kb on + strand, within QEN71_RS34930 at 1172.869 kb on + strand at 1172.869 kb on + strand at 1172.870 kb on - strand at 1172.870 kb on - strand at 1172.902 kb on + strand at 1172.903 kb on - strand at 1172.903 kb on - strand at 1172.918 kb on + strand at 1172.930 kb on + strand at 1172.931 kb on - strand at 1173.013 kb on + strand at 1173.045 kb on + strand at 1173.045 kb on + strand at 1173.045 kb on + strand at 1173.046 kb on - strand at 1173.046 kb on - strand at 1173.046 kb on - strand at 1173.120 kb on - strand at 1173.350 kb on + strand, within QEN71_RS34935 at 1173.388 kb on - strand, within QEN71_RS34935 at 1173.474 kb on - strand, within QEN71_RS34935 at 1173.474 kb on - strand, within QEN71_RS34935 at 1173.499 kb on + strand, within QEN71_RS34935 at 1173.500 kb on - strand, within QEN71_RS34935 at 1173.524 kb on + strand, within QEN71_RS34935 at 1173.678 kb on + strand, within QEN71_RS34935 at 1173.706 kb on + strand, within QEN71_RS34935 at 1173.707 kb on - strand, within QEN71_RS34935 at 1173.707 kb on - strand, within QEN71_RS34935 at 1173.707 kb on - strand, within QEN71_RS34935
Per-strain Table
Position Strand Gene LocusTag Fraction LB_noSalt with Cobalt chloride 0.25 mM remove 1,171,421 + +0.5 1,171,422 - -0.2 1,171,422 - -0.2 1,171,476 + QEN71_RS34925 0.15 -0.0 1,171,476 + QEN71_RS34925 0.15 -0.2 1,171,476 + QEN71_RS34925 0.15 -1.0 1,171,477 - QEN71_RS34925 0.15 +0.5 1,171,477 - QEN71_RS34925 0.15 +0.8 1,171,477 - QEN71_RS34925 0.15 +0.5 1,171,530 - QEN71_RS34925 0.20 -0.8 1,171,567 - QEN71_RS34925 0.24 +0.8 1,171,567 - QEN71_RS34925 0.24 +2.1 1,171,615 + QEN71_RS34925 0.30 -1.8 1,171,615 + QEN71_RS34925 0.30 -0.5 1,171,640 + QEN71_RS34925 0.32 +0.3 1,171,661 + QEN71_RS34925 0.34 +1.2 1,171,661 + QEN71_RS34925 0.34 -0.3 1,171,662 - QEN71_RS34925 0.35 -0.5 1,171,696 - QEN71_RS34925 0.38 -0.1 1,171,725 + QEN71_RS34925 0.41 -1.4 1,171,725 + QEN71_RS34925 0.41 +0.9 1,171,726 - QEN71_RS34925 0.41 +0.4 1,171,728 + QEN71_RS34925 0.42 -0.8 1,171,728 + QEN71_RS34925 0.42 +0.4 1,171,728 + QEN71_RS34925 0.42 +0.8 1,171,919 - QEN71_RS34925 0.62 +1.0 1,172,147 + QEN71_RS34925 0.86 -0.3 1,172,147 + QEN71_RS34925 0.86 -0.1 1,172,147 + QEN71_RS34925 0.86 +1.3 1,172,179 + QEN71_RS34925 0.89 -0.2 1,172,451 + QEN71_RS34930 0.24 -1.1 1,172,451 + QEN71_RS34930 0.24 -0.2 1,172,452 - QEN71_RS34930 0.24 -1.2 1,172,516 + QEN71_RS34930 0.35 +1.5 1,172,517 - QEN71_RS34930 0.35 +0.3 1,172,517 - QEN71_RS34930 0.35 -0.4 1,172,661 + QEN71_RS34930 0.58 +0.3 1,172,662 - QEN71_RS34930 0.59 +0.5 1,172,662 - QEN71_RS34930 0.59 -0.5 1,172,662 - QEN71_RS34930 0.59 +0.8 1,172,670 + QEN71_RS34930 0.60 -1.2 1,172,671 - QEN71_RS34930 0.60 -0.4 1,172,671 - QEN71_RS34930 0.60 -0.1 1,172,753 + QEN71_RS34930 0.74 -0.5 1,172,803 + QEN71_RS34930 0.82 -0.0 1,172,803 + QEN71_RS34930 0.82 -0.3 1,172,803 + QEN71_RS34930 0.82 +0.4 1,172,804 - QEN71_RS34930 0.82 -0.1 1,172,804 - QEN71_RS34930 0.82 -0.7 1,172,814 + QEN71_RS34930 0.83 +0.3 1,172,814 + QEN71_RS34930 0.83 +0.0 1,172,814 + QEN71_RS34930 0.83 -3.1 1,172,869 + -1.4 1,172,869 + -0.5 1,172,870 - +1.3 1,172,870 - -1.3 1,172,902 + -0.2 1,172,903 - +0.0 1,172,903 - +0.8 1,172,918 + +1.4 1,172,930 + -0.2 1,172,931 - -0.9 1,173,013 + +0.1 1,173,045 + -0.5 1,173,045 + -0.1 1,173,045 + -0.0 1,173,046 - +1.4 1,173,046 - -1.5 1,173,046 - -0.5 1,173,120 - +0.3 1,173,350 + QEN71_RS34935 0.33 -0.1 1,173,388 - QEN71_RS34935 0.38 +1.0 1,173,474 - QEN71_RS34935 0.47 +0.6 1,173,474 - QEN71_RS34935 0.47 -1.6 1,173,499 + QEN71_RS34935 0.50 -0.6 1,173,500 - QEN71_RS34935 0.50 -0.5 1,173,524 + QEN71_RS34935 0.53 -0.4 1,173,678 + QEN71_RS34935 0.70 +1.4 1,173,706 + QEN71_RS34935 0.73 +0.1 1,173,707 - QEN71_RS34935 0.73 -0.2 1,173,707 - QEN71_RS34935 0.73 -1.2 1,173,707 - QEN71_RS34935 0.73 -0.2
Or see this region's nucleotide sequence