Experiment: LB_noSalt with Cobalt chloride 0.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS12895 and QEN71_RS12900 are separated by 61 nucleotides QEN71_RS12900 and QEN71_RS12905 are separated by 207 nucleotides QEN71_RS12905 and QEN71_RS12910 overlap by 4 nucleotides
QEN71_RS12895: QEN71_RS12895 - MFS transporter, at 2,886,447 to 2,887,982
_RS12895
QEN71_RS12900: QEN71_RS12900 - glycine zipper family protein, at 2,888,044 to 2,888,625
_RS12900
QEN71_RS12905: QEN71_RS12905 - MarR family winged helix-turn-helix transcriptional regulator, at 2,888,833 to 2,889,366
_RS12905
QEN71_RS12910: QEN71_RS12910 - MFS transporter, at 2,889,363 to 2,890,565
_RS12910
Position (kb)
2888
2889 Strain fitness (log2 ratio)
-2
-1
0
1 at 2887.092 kb on + strand, within QEN71_RS12895 at 2887.092 kb on + strand, within QEN71_RS12895 at 2887.092 kb on + strand, within QEN71_RS12895 at 2887.092 kb on + strand, within QEN71_RS12895 at 2887.092 kb on + strand, within QEN71_RS12895 at 2887.092 kb on + strand, within QEN71_RS12895 at 2887.093 kb on - strand, within QEN71_RS12895 at 2887.093 kb on - strand, within QEN71_RS12895 at 2887.094 kb on + strand, within QEN71_RS12895 at 2887.302 kb on + strand, within QEN71_RS12895 at 2887.302 kb on + strand, within QEN71_RS12895 at 2887.302 kb on + strand, within QEN71_RS12895 at 2887.303 kb on - strand, within QEN71_RS12895 at 2887.303 kb on - strand, within QEN71_RS12895 at 2887.303 kb on - strand, within QEN71_RS12895 at 2887.303 kb on - strand, within QEN71_RS12895 at 2887.303 kb on - strand, within QEN71_RS12895 at 2887.303 kb on - strand, within QEN71_RS12895 at 2887.315 kb on - strand, within QEN71_RS12895 at 2887.371 kb on + strand, within QEN71_RS12895 at 2887.372 kb on - strand, within QEN71_RS12895 at 2887.372 kb on - strand, within QEN71_RS12895 at 2887.372 kb on - strand, within QEN71_RS12895 at 2887.373 kb on + strand, within QEN71_RS12895 at 2887.373 kb on + strand, within QEN71_RS12895 at 2887.373 kb on + strand, within QEN71_RS12895 at 2887.374 kb on - strand, within QEN71_RS12895 at 2887.374 kb on - strand, within QEN71_RS12895 at 2887.374 kb on - strand, within QEN71_RS12895 at 2887.374 kb on - strand, within QEN71_RS12895 at 2887.425 kb on + strand, within QEN71_RS12895 at 2887.425 kb on + strand, within QEN71_RS12895 at 2887.589 kb on + strand, within QEN71_RS12895 at 2887.590 kb on - strand, within QEN71_RS12895 at 2887.590 kb on - strand, within QEN71_RS12895 at 2887.863 kb on + strand at 2887.863 kb on + strand at 2887.864 kb on - strand at 2888.048 kb on + strand at 2888.052 kb on - strand at 2888.066 kb on + strand at 2888.066 kb on + strand at 2888.088 kb on - strand at 2888.088 kb on - strand at 2888.088 kb on - strand at 2888.090 kb on + strand at 2888.090 kb on + strand at 2888.093 kb on + strand at 2888.093 kb on + strand at 2888.112 kb on - strand, within QEN71_RS12900 at 2888.112 kb on - strand, within QEN71_RS12900 at 2888.129 kb on + strand, within QEN71_RS12900 at 2888.129 kb on + strand, within QEN71_RS12900 at 2888.130 kb on - strand, within QEN71_RS12900 at 2888.132 kb on + strand, within QEN71_RS12900 at 2888.132 kb on + strand, within QEN71_RS12900 at 2888.132 kb on + strand, within QEN71_RS12900 at 2888.132 kb on + strand, within QEN71_RS12900 at 2888.207 kb on + strand, within QEN71_RS12900 at 2888.247 kb on - strand, within QEN71_RS12900 at 2888.451 kb on - strand, within QEN71_RS12900 at 2888.465 kb on + strand, within QEN71_RS12900 at 2888.466 kb on - strand, within QEN71_RS12900 at 2888.604 kb on + strand at 2888.604 kb on + strand at 2888.663 kb on + strand at 2888.663 kb on + strand at 2888.664 kb on - strand at 2888.664 kb on - strand at 2888.664 kb on - strand at 2888.664 kb on - strand at 2888.664 kb on - strand at 2888.664 kb on - strand at 2888.664 kb on - strand at 2888.664 kb on - strand at 2888.664 kb on - strand at 2888.665 kb on + strand at 2888.665 kb on + strand at 2888.666 kb on - strand at 2888.666 kb on - strand at 2888.666 kb on - strand at 2888.702 kb on + strand at 2888.718 kb on - strand at 2888.784 kb on + strand at 2888.785 kb on - strand at 2888.785 kb on - strand at 2888.787 kb on - strand at 2888.803 kb on + strand at 2889.138 kb on - strand, within QEN71_RS12905
Per-strain Table
Position Strand Gene LocusTag Fraction LB_noSalt with Cobalt chloride 0.25 mM remove 2,887,092 + QEN71_RS12895 0.42 -1.9 2,887,092 + QEN71_RS12895 0.42 -1.5 2,887,092 + QEN71_RS12895 0.42 +1.5 2,887,092 + QEN71_RS12895 0.42 +1.5 2,887,092 + QEN71_RS12895 0.42 -0.7 2,887,092 + QEN71_RS12895 0.42 -0.3 2,887,093 - QEN71_RS12895 0.42 -0.2 2,887,093 - QEN71_RS12895 0.42 -0.4 2,887,094 + QEN71_RS12895 0.42 +0.9 2,887,302 + QEN71_RS12895 0.56 +0.9 2,887,302 + QEN71_RS12895 0.56 -1.8 2,887,302 + QEN71_RS12895 0.56 +0.6 2,887,303 - QEN71_RS12895 0.56 +1.4 2,887,303 - QEN71_RS12895 0.56 +0.0 2,887,303 - QEN71_RS12895 0.56 -1.2 2,887,303 - QEN71_RS12895 0.56 +0.7 2,887,303 - QEN71_RS12895 0.56 -0.2 2,887,303 - QEN71_RS12895 0.56 -0.8 2,887,315 - QEN71_RS12895 0.57 +0.2 2,887,371 + QEN71_RS12895 0.60 +0.8 2,887,372 - QEN71_RS12895 0.60 -1.3 2,887,372 - QEN71_RS12895 0.60 +0.6 2,887,372 - QEN71_RS12895 0.60 -0.6 2,887,373 + QEN71_RS12895 0.60 -0.4 2,887,373 + QEN71_RS12895 0.60 -0.2 2,887,373 + QEN71_RS12895 0.60 +0.7 2,887,374 - QEN71_RS12895 0.60 -0.9 2,887,374 - QEN71_RS12895 0.60 +0.1 2,887,374 - QEN71_RS12895 0.60 +0.0 2,887,374 - QEN71_RS12895 0.60 +0.4 2,887,425 + QEN71_RS12895 0.64 -0.1 2,887,425 + QEN71_RS12895 0.64 +0.5 2,887,589 + QEN71_RS12895 0.74 -0.5 2,887,590 - QEN71_RS12895 0.74 +0.9 2,887,590 - QEN71_RS12895 0.74 -0.9 2,887,863 + +0.1 2,887,863 + -0.1 2,887,864 - -0.5 2,888,048 + -0.1 2,888,052 - +1.2 2,888,066 + -0.2 2,888,066 + +1.6 2,888,088 - -0.2 2,888,088 - +0.4 2,888,088 - +0.5 2,888,090 + +0.2 2,888,090 + -1.0 2,888,093 + +0.4 2,888,093 + -0.0 2,888,112 - QEN71_RS12900 0.12 -0.3 2,888,112 - QEN71_RS12900 0.12 -0.4 2,888,129 + QEN71_RS12900 0.15 -0.8 2,888,129 + QEN71_RS12900 0.15 -1.5 2,888,130 - QEN71_RS12900 0.15 -0.2 2,888,132 + QEN71_RS12900 0.15 +0.2 2,888,132 + QEN71_RS12900 0.15 -0.6 2,888,132 + QEN71_RS12900 0.15 +0.3 2,888,132 + QEN71_RS12900 0.15 -0.7 2,888,207 + QEN71_RS12900 0.28 -0.5 2,888,247 - QEN71_RS12900 0.35 +0.6 2,888,451 - QEN71_RS12900 0.70 +0.8 2,888,465 + QEN71_RS12900 0.72 -0.4 2,888,466 - QEN71_RS12900 0.73 -0.7 2,888,604 + -0.6 2,888,604 + -0.9 2,888,663 + +0.2 2,888,663 + +0.2 2,888,664 - -0.2 2,888,664 - -0.2 2,888,664 - -1.8 2,888,664 - +0.0 2,888,664 - +1.4 2,888,664 - +0.0 2,888,664 - -1.8 2,888,664 - -2.4 2,888,664 - -0.3 2,888,665 + -0.3 2,888,665 + +0.5 2,888,666 - +0.4 2,888,666 - +0.3 2,888,666 - +0.5 2,888,702 + +1.1 2,888,718 - -0.0 2,888,784 + -0.4 2,888,785 - -0.8 2,888,785 - -0.2 2,888,787 - -0.1 2,888,803 + -0.8 2,889,138 - QEN71_RS12905 0.57 +0.2
Or see this region's nucleotide sequence