Experiment: LB_noSalt with Cobalt chloride 0.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS08735 and QEN71_RS08740 are separated by 112 nucleotides QEN71_RS08740 and QEN71_RS08745 are separated by 165 nucleotides
QEN71_RS08735: QEN71_RS08735 - OmpA family protein, at 1,962,582 to 1,963,721
_RS08735
QEN71_RS08740: QEN71_RS08740 - flagellar brake protein, at 1,963,834 to 1,964,784
_RS08740
QEN71_RS08745: QEN71_RS08745 - precorrin-3B C(17)-methyltransferase, at 1,964,950 to 1,966,677
_RS08745
Position (kb)
1963
1964
1965 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1962.876 kb on + strand, within QEN71_RS08735 at 1962.877 kb on - strand, within QEN71_RS08735 at 1962.877 kb on - strand, within QEN71_RS08735 at 1962.877 kb on - strand, within QEN71_RS08735 at 1963.157 kb on + strand, within QEN71_RS08735 at 1963.157 kb on + strand, within QEN71_RS08735 at 1963.158 kb on - strand, within QEN71_RS08735 at 1963.226 kb on - strand, within QEN71_RS08735 at 1963.226 kb on - strand, within QEN71_RS08735 at 1963.226 kb on - strand, within QEN71_RS08735 at 1963.719 kb on + strand at 1963.835 kb on + strand at 1963.835 kb on + strand at 1963.835 kb on + strand at 1963.886 kb on + strand at 1963.886 kb on + strand at 1963.886 kb on + strand at 1963.886 kb on + strand at 1963.887 kb on - strand at 1963.887 kb on - strand at 1963.887 kb on - strand at 1964.246 kb on + strand, within QEN71_RS08740 at 1964.247 kb on - strand, within QEN71_RS08740 at 1964.247 kb on - strand, within QEN71_RS08740 at 1964.247 kb on - strand, within QEN71_RS08740 at 1964.247 kb on - strand, within QEN71_RS08740 at 1964.809 kb on + strand at 1964.813 kb on + strand at 1964.813 kb on + strand at 1964.814 kb on - strand at 1964.818 kb on + strand at 1964.819 kb on - strand at 1964.820 kb on + strand at 1964.843 kb on + strand at 1964.910 kb on + strand at 1964.910 kb on + strand at 1964.910 kb on + strand at 1964.910 kb on + strand at 1964.911 kb on - strand at 1964.911 kb on - strand at 1964.932 kb on - strand at 1964.942 kb on - strand at 1964.942 kb on - strand at 1964.942 kb on - strand at 1964.942 kb on - strand at 1964.942 kb on - strand at 1964.951 kb on + strand at 1964.952 kb on - strand at 1964.971 kb on - strand at 1964.971 kb on - strand at 1964.972 kb on + strand at 1964.972 kb on + strand at 1964.972 kb on + strand at 1964.973 kb on - strand at 1965.031 kb on + strand at 1965.031 kb on + strand at 1965.031 kb on + strand at 1965.031 kb on + strand at 1965.032 kb on - strand at 1965.032 kb on - strand at 1965.048 kb on + strand at 1965.114 kb on + strand at 1965.127 kb on + strand, within QEN71_RS08745 at 1965.127 kb on + strand, within QEN71_RS08745 at 1965.127 kb on + strand, within QEN71_RS08745 at 1965.128 kb on - strand, within QEN71_RS08745 at 1965.128 kb on - strand, within QEN71_RS08745 at 1965.165 kb on + strand, within QEN71_RS08745 at 1965.215 kb on + strand, within QEN71_RS08745 at 1965.215 kb on + strand, within QEN71_RS08745 at 1965.215 kb on + strand, within QEN71_RS08745 at 1965.215 kb on + strand, within QEN71_RS08745 at 1965.215 kb on + strand, within QEN71_RS08745 at 1965.215 kb on + strand, within QEN71_RS08745 at 1965.215 kb on + strand, within QEN71_RS08745 at 1965.215 kb on + strand, within QEN71_RS08745 at 1965.215 kb on + strand, within QEN71_RS08745 at 1965.215 kb on + strand, within QEN71_RS08745 at 1965.215 kb on + strand, within QEN71_RS08745 at 1965.215 kb on + strand, within QEN71_RS08745 at 1965.216 kb on - strand, within QEN71_RS08745 at 1965.216 kb on - strand, within QEN71_RS08745 at 1965.216 kb on - strand, within QEN71_RS08745 at 1965.216 kb on - strand, within QEN71_RS08745 at 1965.216 kb on - strand, within QEN71_RS08745 at 1965.216 kb on - strand, within QEN71_RS08745 at 1965.216 kb on - strand, within QEN71_RS08745 at 1965.216 kb on - strand, within QEN71_RS08745 at 1965.216 kb on - strand, within QEN71_RS08745 at 1965.216 kb on - strand, within QEN71_RS08745 at 1965.216 kb on - strand, within QEN71_RS08745 at 1965.216 kb on - strand, within QEN71_RS08745 at 1965.216 kb on - strand, within QEN71_RS08745 at 1965.216 kb on - strand, within QEN71_RS08745 at 1965.216 kb on - strand, within QEN71_RS08745 at 1965.216 kb on - strand, within QEN71_RS08745 at 1965.216 kb on - strand, within QEN71_RS08745 at 1965.408 kb on - strand, within QEN71_RS08745 at 1965.408 kb on - strand, within QEN71_RS08745 at 1965.611 kb on + strand, within QEN71_RS08745 at 1965.611 kb on + strand, within QEN71_RS08745 at 1965.611 kb on + strand, within QEN71_RS08745 at 1965.612 kb on - strand, within QEN71_RS08745 at 1965.612 kb on - strand, within QEN71_RS08745 at 1965.612 kb on - strand, within QEN71_RS08745 at 1965.612 kb on - strand, within QEN71_RS08745
Per-strain Table
Position Strand Gene LocusTag Fraction LB_noSalt with Cobalt chloride 0.25 mM remove 1,962,876 + QEN71_RS08735 0.26 -0.2 1,962,877 - QEN71_RS08735 0.26 +0.5 1,962,877 - QEN71_RS08735 0.26 -0.2 1,962,877 - QEN71_RS08735 0.26 +2.1 1,963,157 + QEN71_RS08735 0.50 +0.8 1,963,157 + QEN71_RS08735 0.50 -0.9 1,963,158 - QEN71_RS08735 0.51 -0.7 1,963,226 - QEN71_RS08735 0.56 -0.2 1,963,226 - QEN71_RS08735 0.56 -0.3 1,963,226 - QEN71_RS08735 0.56 -0.5 1,963,719 + -0.7 1,963,835 + +0.3 1,963,835 + -0.3 1,963,835 + +0.9 1,963,886 + -0.2 1,963,886 + -0.1 1,963,886 + -0.5 1,963,886 + +1.7 1,963,887 - -0.6 1,963,887 - +0.4 1,963,887 - -0.1 1,964,246 + QEN71_RS08740 0.43 -0.5 1,964,247 - QEN71_RS08740 0.43 -0.3 1,964,247 - QEN71_RS08740 0.43 -0.6 1,964,247 - QEN71_RS08740 0.43 -0.6 1,964,247 - QEN71_RS08740 0.43 +0.5 1,964,809 + -1.1 1,964,813 + -0.9 1,964,813 + +2.5 1,964,814 - -0.9 1,964,818 + -1.2 1,964,819 - +1.5 1,964,820 + +0.7 1,964,843 + -0.1 1,964,910 + +0.4 1,964,910 + -0.5 1,964,910 + +0.3 1,964,910 + -0.1 1,964,911 - -1.5 1,964,911 - -0.3 1,964,932 - -0.7 1,964,942 - +0.3 1,964,942 - -0.4 1,964,942 - +0.3 1,964,942 - -0.1 1,964,942 - +1.0 1,964,951 + -0.9 1,964,952 - +0.1 1,964,971 - +0.1 1,964,971 - +1.0 1,964,972 + -1.1 1,964,972 + +0.4 1,964,972 + +0.4 1,964,973 - -0.0 1,965,031 + -0.0 1,965,031 + +0.6 1,965,031 + -0.3 1,965,031 + -0.2 1,965,032 - +0.2 1,965,032 - +0.7 1,965,048 + +0.2 1,965,114 + -0.5 1,965,127 + QEN71_RS08745 0.10 -0.1 1,965,127 + QEN71_RS08745 0.10 +1.4 1,965,127 + QEN71_RS08745 0.10 -0.2 1,965,128 - QEN71_RS08745 0.10 -0.8 1,965,128 - QEN71_RS08745 0.10 +1.4 1,965,165 + QEN71_RS08745 0.12 -1.5 1,965,215 + QEN71_RS08745 0.15 -0.6 1,965,215 + QEN71_RS08745 0.15 -1.5 1,965,215 + QEN71_RS08745 0.15 -2.5 1,965,215 + QEN71_RS08745 0.15 +0.3 1,965,215 + QEN71_RS08745 0.15 +0.5 1,965,215 + QEN71_RS08745 0.15 -0.4 1,965,215 + QEN71_RS08745 0.15 +0.0 1,965,215 + QEN71_RS08745 0.15 -0.1 1,965,215 + QEN71_RS08745 0.15 +0.7 1,965,215 + QEN71_RS08745 0.15 +0.7 1,965,215 + QEN71_RS08745 0.15 -1.6 1,965,215 + QEN71_RS08745 0.15 -0.1 1,965,216 - QEN71_RS08745 0.15 -0.2 1,965,216 - QEN71_RS08745 0.15 -1.1 1,965,216 - QEN71_RS08745 0.15 +0.8 1,965,216 - QEN71_RS08745 0.15 -0.2 1,965,216 - QEN71_RS08745 0.15 +1.0 1,965,216 - QEN71_RS08745 0.15 +1.9 1,965,216 - QEN71_RS08745 0.15 +0.1 1,965,216 - QEN71_RS08745 0.15 -1.3 1,965,216 - QEN71_RS08745 0.15 -0.3 1,965,216 - QEN71_RS08745 0.15 +0.1 1,965,216 - QEN71_RS08745 0.15 +0.6 1,965,216 - QEN71_RS08745 0.15 -0.6 1,965,216 - QEN71_RS08745 0.15 -0.7 1,965,216 - QEN71_RS08745 0.15 -0.3 1,965,216 - QEN71_RS08745 0.15 +0.9 1,965,216 - QEN71_RS08745 0.15 +0.6 1,965,216 - QEN71_RS08745 0.15 +0.1 1,965,408 - QEN71_RS08745 0.27 +0.1 1,965,408 - QEN71_RS08745 0.27 -0.7 1,965,611 + QEN71_RS08745 0.38 -0.1 1,965,611 + QEN71_RS08745 0.38 -0.4 1,965,611 + QEN71_RS08745 0.38 -0.9 1,965,612 - QEN71_RS08745 0.38 -0.2 1,965,612 - QEN71_RS08745 0.38 -0.5 1,965,612 - QEN71_RS08745 0.38 -0.4 1,965,612 - QEN71_RS08745 0.38 -0.0
Or see this region's nucleotide sequence