Strain Fitness in Paraburkholderia sabiae LMG 24235 around QEN71_RS44655

Experiment: L-Glutamic (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntQEN71_RS44650 and QEN71_RS44655 are separated by 134 nucleotidesQEN71_RS44655 and QEN71_RS44660 are separated by 307 nucleotides QEN71_RS44650: QEN71_RS44650 - IS5 family transposase, at 395,441 to 396,247 _RS44650 QEN71_RS44655: QEN71_RS44655 - transposase, at 396,382 to 397,014 _RS44655 QEN71_RS44660: QEN71_RS44660 - IS110 family transposase, at 397,322 to 398,383 _RS44660 Position (kb) 396 397 398Strain fitness (log2 ratio) -1 0 1at 396.208 kb on + strandat 396.208 kb on + strandat 396.208 kb on + strandat 396.255 kb on + strandat 396.256 kb on - strandat 396.313 kb on + strandat 396.313 kb on + strandat 396.313 kb on + strandat 396.314 kb on - strandat 396.315 kb on + strandat 396.315 kb on + strandat 396.315 kb on + strandat 396.316 kb on - strandat 396.316 kb on - strandat 396.316 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamic (C)
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396,208 + -0.1
396,208 + -1.4
396,208 + -1.3
396,255 + +0.5
396,256 - -0.8
396,313 + -0.7
396,313 + -1.7
396,313 + -0.8
396,314 - -1.4
396,315 + +0.2
396,315 + -0.7
396,315 + -0.1
396,316 - +0.9
396,316 - -0.2
396,316 - -0.9

Or see this region's nucleotide sequence