Experiment: L-Glutamic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS27965 and QEN71_RS27970 are separated by 44 nucleotides QEN71_RS27970 and QEN71_RS27975 are separated by 30 nucleotides QEN71_RS27975 and QEN71_RS27980 are separated by 16 nucleotides QEN71_RS27980 and QEN71_RS27985 are separated by 403 nucleotides
QEN71_RS27965: QEN71_RS27965 - flagellar basal body L-ring protein FlgH, at 6,218,182 to 6,218,868
_RS27965
QEN71_RS27970: QEN71_RS27970 - hypothetical protein, at 6,218,913 to 6,219,638
_RS27970
QEN71_RS27975: QEN71_RS27975 - hypothetical protein, at 6,219,669 to 6,219,878
_RS27975
QEN71_RS27980: QEN71_RS27980 - hypothetical protein, at 6,219,895 to 6,220,086
_RS27980
QEN71_RS27985: QEN71_RS27985 - response regulator, at 6,220,490 to 6,221,227
_RS27985
Position (kb)
6219
6220 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 6218.678 kb on + strand, within QEN71_RS27965 at 6218.679 kb on - strand, within QEN71_RS27965 at 6218.679 kb on - strand, within QEN71_RS27965 at 6218.705 kb on + strand, within QEN71_RS27965 at 6218.705 kb on + strand, within QEN71_RS27965 at 6218.705 kb on + strand, within QEN71_RS27965 at 6218.706 kb on - strand, within QEN71_RS27965 at 6218.811 kb on - strand at 6218.811 kb on - strand at 6218.877 kb on + strand at 6218.877 kb on + strand at 6218.877 kb on + strand at 6218.877 kb on + strand at 6218.877 kb on + strand at 6218.877 kb on + strand at 6218.878 kb on - strand at 6218.878 kb on - strand at 6218.878 kb on - strand at 6218.878 kb on - strand at 6218.878 kb on - strand at 6218.878 kb on - strand at 6218.878 kb on - strand at 6218.965 kb on + strand at 6218.965 kb on + strand at 6218.965 kb on + strand at 6218.965 kb on + strand at 6218.965 kb on + strand at 6218.966 kb on - strand at 6218.966 kb on - strand at 6218.966 kb on - strand at 6218.966 kb on - strand at 6218.966 kb on - strand at 6218.966 kb on - strand at 6218.989 kb on + strand, within QEN71_RS27970 at 6218.989 kb on + strand, within QEN71_RS27970 at 6218.990 kb on - strand, within QEN71_RS27970 at 6218.990 kb on - strand, within QEN71_RS27970 at 6218.990 kb on - strand, within QEN71_RS27970 at 6218.990 kb on - strand, within QEN71_RS27970 at 6218.990 kb on - strand, within QEN71_RS27970 at 6218.990 kb on - strand, within QEN71_RS27970 at 6218.990 kb on - strand, within QEN71_RS27970 at 6218.990 kb on - strand, within QEN71_RS27970 at 6219.061 kb on + strand, within QEN71_RS27970 at 6219.061 kb on + strand, within QEN71_RS27970 at 6219.061 kb on + strand, within QEN71_RS27970 at 6219.061 kb on + strand, within QEN71_RS27970 at 6219.061 kb on + strand, within QEN71_RS27970 at 6219.061 kb on + strand, within QEN71_RS27970 at 6219.061 kb on + strand, within QEN71_RS27970 at 6219.061 kb on + strand, within QEN71_RS27970 at 6219.062 kb on - strand, within QEN71_RS27970 at 6219.062 kb on - strand, within QEN71_RS27970 at 6219.062 kb on - strand, within QEN71_RS27970 at 6219.062 kb on - strand, within QEN71_RS27970 at 6219.062 kb on - strand, within QEN71_RS27970 at 6219.062 kb on - strand, within QEN71_RS27970 at 6219.062 kb on - strand, within QEN71_RS27970 at 6219.188 kb on - strand, within QEN71_RS27970 at 6219.231 kb on + strand, within QEN71_RS27970 at 6219.231 kb on + strand, within QEN71_RS27970 at 6219.231 kb on + strand, within QEN71_RS27970 at 6219.231 kb on + strand, within QEN71_RS27970 at 6219.232 kb on - strand, within QEN71_RS27970 at 6219.232 kb on - strand, within QEN71_RS27970 at 6219.232 kb on - strand, within QEN71_RS27970 at 6219.232 kb on - strand, within QEN71_RS27970 at 6219.232 kb on - strand, within QEN71_RS27970 at 6219.232 kb on - strand, within QEN71_RS27970 at 6219.472 kb on + strand, within QEN71_RS27970 at 6219.472 kb on + strand, within QEN71_RS27970 at 6219.472 kb on + strand, within QEN71_RS27970 at 6219.473 kb on - strand, within QEN71_RS27970 at 6219.626 kb on - strand at 6219.652 kb on + strand at 6219.653 kb on - strand at 6219.882 kb on + strand at 6219.882 kb on + strand at 6219.883 kb on - strand at 6220.169 kb on - strand at 6220.169 kb on - strand at 6220.176 kb on - strand at 6220.241 kb on + strand at 6220.241 kb on + strand at 6220.241 kb on + strand at 6220.241 kb on + strand at 6220.242 kb on - strand at 6220.242 kb on - strand at 6220.275 kb on + strand at 6220.275 kb on + strand at 6220.275 kb on + strand at 6220.275 kb on + strand at 6220.276 kb on - strand at 6220.276 kb on - strand at 6220.276 kb on - strand at 6220.276 kb on - strand at 6220.276 kb on - strand at 6220.332 kb on + strand at 6220.333 kb on - strand at 6220.431 kb on + strand at 6220.431 kb on + strand at 6220.431 kb on + strand at 6220.431 kb on + strand at 6220.431 kb on + strand at 6220.431 kb on + strand at 6220.431 kb on + strand at 6220.431 kb on + strand at 6220.431 kb on + strand at 6220.431 kb on + strand at 6220.432 kb on - strand at 6220.432 kb on - strand at 6220.432 kb on - strand at 6220.432 kb on - strand at 6220.432 kb on - strand at 6220.432 kb on - strand at 6220.432 kb on - strand at 6220.432 kb on - strand at 6220.432 kb on - strand at 6220.432 kb on - strand at 6220.441 kb on + strand at 6220.441 kb on + strand at 6220.442 kb on - strand at 6220.478 kb on + strand at 6220.479 kb on - strand at 6220.568 kb on + strand, within QEN71_RS27985 at 6220.568 kb on + strand, within QEN71_RS27985 at 6220.568 kb on + strand, within QEN71_RS27985 at 6220.569 kb on - strand, within QEN71_RS27985 at 6220.569 kb on - strand, within QEN71_RS27985 at 6220.569 kb on - strand, within QEN71_RS27985 at 6220.787 kb on + strand, within QEN71_RS27985 at 6220.787 kb on + strand, within QEN71_RS27985 at 6220.787 kb on + strand, within QEN71_RS27985 at 6220.787 kb on + strand, within QEN71_RS27985 at 6220.787 kb on + strand, within QEN71_RS27985 at 6220.787 kb on + strand, within QEN71_RS27985 at 6220.787 kb on + strand, within QEN71_RS27985 at 6220.788 kb on - strand, within QEN71_RS27985
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (C) remove 6,218,678 + QEN71_RS27965 0.72 -0.6 6,218,679 - QEN71_RS27965 0.72 -0.1 6,218,679 - QEN71_RS27965 0.72 -2.1 6,218,705 + QEN71_RS27965 0.76 +0.1 6,218,705 + QEN71_RS27965 0.76 -0.4 6,218,705 + QEN71_RS27965 0.76 -0.6 6,218,706 - QEN71_RS27965 0.76 -1.1 6,218,811 - -1.9 6,218,811 - +0.3 6,218,877 + -0.6 6,218,877 + -0.5 6,218,877 + -0.2 6,218,877 + -0.9 6,218,877 + +0.6 6,218,877 + -0.8 6,218,878 - +0.4 6,218,878 - +0.0 6,218,878 - -0.8 6,218,878 - +0.7 6,218,878 - -0.4 6,218,878 - -0.7 6,218,878 - -0.1 6,218,965 + +0.4 6,218,965 + +0.5 6,218,965 + -1.7 6,218,965 + +0.1 6,218,965 + +0.3 6,218,966 - +0.8 6,218,966 - +0.2 6,218,966 - +0.1 6,218,966 - +0.4 6,218,966 - +2.6 6,218,966 - +0.0 6,218,989 + QEN71_RS27970 0.10 -0.2 6,218,989 + QEN71_RS27970 0.10 +0.4 6,218,990 - QEN71_RS27970 0.11 +0.2 6,218,990 - QEN71_RS27970 0.11 -0.4 6,218,990 - QEN71_RS27970 0.11 -0.9 6,218,990 - QEN71_RS27970 0.11 -0.2 6,218,990 - QEN71_RS27970 0.11 +0.5 6,218,990 - QEN71_RS27970 0.11 -0.2 6,218,990 - QEN71_RS27970 0.11 -0.0 6,218,990 - QEN71_RS27970 0.11 -0.0 6,219,061 + QEN71_RS27970 0.20 +1.2 6,219,061 + QEN71_RS27970 0.20 +0.1 6,219,061 + QEN71_RS27970 0.20 -0.2 6,219,061 + QEN71_RS27970 0.20 -0.8 6,219,061 + QEN71_RS27970 0.20 -0.2 6,219,061 + QEN71_RS27970 0.20 +0.2 6,219,061 + QEN71_RS27970 0.20 -0.3 6,219,061 + QEN71_RS27970 0.20 +1.1 6,219,062 - QEN71_RS27970 0.21 -0.4 6,219,062 - QEN71_RS27970 0.21 -0.3 6,219,062 - QEN71_RS27970 0.21 +0.1 6,219,062 - QEN71_RS27970 0.21 +0.2 6,219,062 - QEN71_RS27970 0.21 +0.2 6,219,062 - QEN71_RS27970 0.21 +0.0 6,219,062 - QEN71_RS27970 0.21 -0.3 6,219,188 - QEN71_RS27970 0.38 -0.2 6,219,231 + QEN71_RS27970 0.44 -0.1 6,219,231 + QEN71_RS27970 0.44 -0.4 6,219,231 + QEN71_RS27970 0.44 -0.8 6,219,231 + QEN71_RS27970 0.44 -0.2 6,219,232 - QEN71_RS27970 0.44 +0.8 6,219,232 - QEN71_RS27970 0.44 +2.0 6,219,232 - QEN71_RS27970 0.44 +2.4 6,219,232 - QEN71_RS27970 0.44 -3.0 6,219,232 - QEN71_RS27970 0.44 +0.1 6,219,232 - QEN71_RS27970 0.44 +0.6 6,219,472 + QEN71_RS27970 0.77 +0.7 6,219,472 + QEN71_RS27970 0.77 +1.2 6,219,472 + QEN71_RS27970 0.77 +0.0 6,219,473 - QEN71_RS27970 0.77 +0.3 6,219,626 - +1.0 6,219,652 + -0.6 6,219,653 - -0.9 6,219,882 + +0.2 6,219,882 + -1.0 6,219,883 - -0.2 6,220,169 - -0.2 6,220,169 - +0.2 6,220,176 - +1.4 6,220,241 + -0.1 6,220,241 + -0.5 6,220,241 + -2.6 6,220,241 + +0.0 6,220,242 - -0.5 6,220,242 - -0.1 6,220,275 + -0.2 6,220,275 + -0.3 6,220,275 + -0.2 6,220,275 + -0.9 6,220,276 - -0.3 6,220,276 - -1.6 6,220,276 - -0.5 6,220,276 - -0.3 6,220,276 - -0.8 6,220,332 + +0.6 6,220,333 - -0.9 6,220,431 + +0.0 6,220,431 + +0.4 6,220,431 + -0.3 6,220,431 + -0.4 6,220,431 + -0.1 6,220,431 + +0.4 6,220,431 + +0.7 6,220,431 + -0.5 6,220,431 + -1.4 6,220,431 + -1.8 6,220,432 - -1.4 6,220,432 - +0.6 6,220,432 - -0.2 6,220,432 - -0.8 6,220,432 - -0.1 6,220,432 - +0.0 6,220,432 - +0.3 6,220,432 - -1.0 6,220,432 - -1.5 6,220,432 - +0.1 6,220,441 + +0.3 6,220,441 + +0.6 6,220,442 - -0.7 6,220,478 + +0.9 6,220,479 - +0.5 6,220,568 + QEN71_RS27985 0.11 -0.9 6,220,568 + QEN71_RS27985 0.11 -1.9 6,220,568 + QEN71_RS27985 0.11 -0.0 6,220,569 - QEN71_RS27985 0.11 +1.4 6,220,569 - QEN71_RS27985 0.11 +0.3 6,220,569 - QEN71_RS27985 0.11 -0.5 6,220,787 + QEN71_RS27985 0.40 +0.6 6,220,787 + QEN71_RS27985 0.40 -0.3 6,220,787 + QEN71_RS27985 0.40 -0.8 6,220,787 + QEN71_RS27985 0.40 -2.1 6,220,787 + QEN71_RS27985 0.40 +1.5 6,220,787 + QEN71_RS27985 0.40 -0.6 6,220,787 + QEN71_RS27985 0.40 +0.5 6,220,788 - QEN71_RS27985 0.40 +0.7
Or see this region's nucleotide sequence