Experiment: L-Glutamic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS26425 and QEN71_RS26430 are separated by 64 nucleotides QEN71_RS26430 and QEN71_RS26435 are separated by 201 nucleotides QEN71_RS26435 and QEN71_RS26440 are separated by 34 nucleotides
QEN71_RS26425: QEN71_RS26425 - mechanosensitive ion channel family protein, at 5,892,077 to 5,892,889
_RS26425
QEN71_RS26430: QEN71_RS26430 - DedA family protein, at 5,892,954 to 5,893,643
_RS26430
QEN71_RS26435: QEN71_RS26435 - DNA mismatch repair endonuclease MutL, at 5,893,845 to 5,895,914
_RS26435
QEN71_RS26440: QEN71_RS26440 - tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA, at 5,895,949 to 5,896,902
_RS26440
Position (kb)
5893
5894
5895
5896 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 5892.887 kb on + strand at 5892.888 kb on - strand at 5892.896 kb on + strand at 5892.897 kb on - strand at 5893.083 kb on - strand, within QEN71_RS26430 at 5893.381 kb on + strand, within QEN71_RS26430 at 5893.381 kb on + strand, within QEN71_RS26430 at 5893.382 kb on - strand, within QEN71_RS26430 at 5893.382 kb on - strand, within QEN71_RS26430 at 5893.604 kb on + strand at 5893.655 kb on + strand at 5893.655 kb on + strand at 5893.656 kb on - strand at 5893.665 kb on + strand at 5893.666 kb on - strand at 5893.666 kb on - strand at 5893.713 kb on - strand at 5893.720 kb on + strand at 5893.721 kb on - strand at 5893.721 kb on - strand at 5893.760 kb on - strand at 5893.799 kb on + strand at 5893.800 kb on - strand at 5893.800 kb on - strand at 5893.800 kb on - strand at 5893.833 kb on + strand at 5893.836 kb on - strand at 5894.003 kb on - strand at 5894.003 kb on - strand at 5894.003 kb on - strand at 5894.351 kb on + strand, within QEN71_RS26435 at 5894.352 kb on - strand, within QEN71_RS26435 at 5894.385 kb on + strand, within QEN71_RS26435 at 5894.385 kb on + strand, within QEN71_RS26435 at 5894.386 kb on - strand, within QEN71_RS26435 at 5894.631 kb on + strand, within QEN71_RS26435 at 5894.631 kb on + strand, within QEN71_RS26435 at 5894.631 kb on + strand, within QEN71_RS26435 at 5894.631 kb on + strand, within QEN71_RS26435 at 5894.631 kb on + strand, within QEN71_RS26435 at 5894.631 kb on + strand, within QEN71_RS26435 at 5894.631 kb on + strand, within QEN71_RS26435 at 5894.632 kb on - strand, within QEN71_RS26435 at 5894.632 kb on - strand, within QEN71_RS26435 at 5894.682 kb on + strand, within QEN71_RS26435 at 5894.682 kb on + strand, within QEN71_RS26435 at 5894.683 kb on - strand, within QEN71_RS26435 at 5894.745 kb on + strand, within QEN71_RS26435 at 5894.781 kb on + strand, within QEN71_RS26435 at 5894.781 kb on + strand, within QEN71_RS26435 at 5894.781 kb on + strand, within QEN71_RS26435 at 5894.781 kb on + strand, within QEN71_RS26435 at 5894.781 kb on + strand, within QEN71_RS26435 at 5894.781 kb on + strand, within QEN71_RS26435 at 5894.781 kb on + strand, within QEN71_RS26435 at 5894.781 kb on + strand, within QEN71_RS26435 at 5894.781 kb on + strand, within QEN71_RS26435 at 5894.782 kb on - strand, within QEN71_RS26435 at 5894.782 kb on - strand, within QEN71_RS26435 at 5894.782 kb on - strand, within QEN71_RS26435 at 5895.110 kb on + strand, within QEN71_RS26435 at 5895.110 kb on + strand, within QEN71_RS26435 at 5895.110 kb on + strand, within QEN71_RS26435 at 5895.110 kb on + strand, within QEN71_RS26435 at 5895.111 kb on - strand, within QEN71_RS26435 at 5895.153 kb on + strand, within QEN71_RS26435 at 5895.153 kb on + strand, within QEN71_RS26435 at 5895.153 kb on + strand, within QEN71_RS26435 at 5895.153 kb on + strand, within QEN71_RS26435 at 5895.276 kb on + strand, within QEN71_RS26435 at 5895.276 kb on + strand, within QEN71_RS26435 at 5895.372 kb on + strand, within QEN71_RS26435 at 5895.372 kb on + strand, within QEN71_RS26435 at 5895.372 kb on + strand, within QEN71_RS26435 at 5895.372 kb on + strand, within QEN71_RS26435 at 5895.372 kb on + strand, within QEN71_RS26435 at 5895.372 kb on + strand, within QEN71_RS26435 at 5895.372 kb on + strand, within QEN71_RS26435 at 5895.372 kb on + strand, within QEN71_RS26435 at 5895.372 kb on + strand, within QEN71_RS26435 at 5895.372 kb on + strand, within QEN71_RS26435 at 5895.373 kb on - strand, within QEN71_RS26435 at 5895.413 kb on + strand, within QEN71_RS26435 at 5895.441 kb on + strand, within QEN71_RS26435 at 5895.690 kb on + strand, within QEN71_RS26435 at 5895.691 kb on - strand, within QEN71_RS26435 at 5895.691 kb on - strand, within QEN71_RS26435 at 5895.864 kb on + strand at 5895.864 kb on + strand at 5895.865 kb on - strand at 5895.865 kb on - strand at 5895.865 kb on - strand at 5896.174 kb on + strand, within QEN71_RS26440 at 5896.350 kb on + strand, within QEN71_RS26440 at 5896.465 kb on - strand, within QEN71_RS26440 at 5896.535 kb on - strand, within QEN71_RS26440 at 5896.900 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (C) remove 5,892,887 + -0.2 5,892,888 - -0.6 5,892,896 + +1.0 5,892,897 - -1.1 5,893,083 - QEN71_RS26430 0.19 +0.2 5,893,381 + QEN71_RS26430 0.62 -0.0 5,893,381 + QEN71_RS26430 0.62 -1.4 5,893,382 - QEN71_RS26430 0.62 -0.8 5,893,382 - QEN71_RS26430 0.62 +0.4 5,893,604 + -0.8 5,893,655 + -0.3 5,893,655 + -0.3 5,893,656 - -0.4 5,893,665 + +0.2 5,893,666 - -0.1 5,893,666 - +0.0 5,893,713 - -0.8 5,893,720 + +0.9 5,893,721 - -0.1 5,893,721 - -0.8 5,893,760 - -0.2 5,893,799 + -1.4 5,893,800 - +0.4 5,893,800 - -0.4 5,893,800 - +0.2 5,893,833 + +1.2 5,893,836 - +1.4 5,894,003 - -1.4 5,894,003 - +0.5 5,894,003 - -0.8 5,894,351 + QEN71_RS26435 0.24 +0.2 5,894,352 - QEN71_RS26435 0.24 -1.1 5,894,385 + QEN71_RS26435 0.26 -1.1 5,894,385 + QEN71_RS26435 0.26 -0.3 5,894,386 - QEN71_RS26435 0.26 +0.2 5,894,631 + QEN71_RS26435 0.38 -0.7 5,894,631 + QEN71_RS26435 0.38 +0.5 5,894,631 + QEN71_RS26435 0.38 +0.9 5,894,631 + QEN71_RS26435 0.38 +1.1 5,894,631 + QEN71_RS26435 0.38 -0.3 5,894,631 + QEN71_RS26435 0.38 +0.7 5,894,631 + QEN71_RS26435 0.38 -0.3 5,894,632 - QEN71_RS26435 0.38 -1.8 5,894,632 - QEN71_RS26435 0.38 +1.3 5,894,682 + QEN71_RS26435 0.40 -0.7 5,894,682 + QEN71_RS26435 0.40 -0.5 5,894,683 - QEN71_RS26435 0.40 +0.4 5,894,745 + QEN71_RS26435 0.43 -0.5 5,894,781 + QEN71_RS26435 0.45 -2.3 5,894,781 + QEN71_RS26435 0.45 -0.4 5,894,781 + QEN71_RS26435 0.45 +0.7 5,894,781 + QEN71_RS26435 0.45 +0.4 5,894,781 + QEN71_RS26435 0.45 +0.1 5,894,781 + QEN71_RS26435 0.45 -0.1 5,894,781 + QEN71_RS26435 0.45 -0.2 5,894,781 + QEN71_RS26435 0.45 -0.3 5,894,781 + QEN71_RS26435 0.45 +0.5 5,894,782 - QEN71_RS26435 0.45 +0.7 5,894,782 - QEN71_RS26435 0.45 +0.2 5,894,782 - QEN71_RS26435 0.45 +1.3 5,895,110 + QEN71_RS26435 0.61 +1.6 5,895,110 + QEN71_RS26435 0.61 +0.3 5,895,110 + QEN71_RS26435 0.61 +0.2 5,895,110 + QEN71_RS26435 0.61 +3.4 5,895,111 - QEN71_RS26435 0.61 +1.0 5,895,153 + QEN71_RS26435 0.63 -1.7 5,895,153 + QEN71_RS26435 0.63 +0.3 5,895,153 + QEN71_RS26435 0.63 +0.6 5,895,153 + QEN71_RS26435 0.63 +1.3 5,895,276 + QEN71_RS26435 0.69 -0.4 5,895,276 + QEN71_RS26435 0.69 +0.3 5,895,372 + QEN71_RS26435 0.74 +0.1 5,895,372 + QEN71_RS26435 0.74 -0.4 5,895,372 + QEN71_RS26435 0.74 -1.2 5,895,372 + QEN71_RS26435 0.74 +0.5 5,895,372 + QEN71_RS26435 0.74 -1.6 5,895,372 + QEN71_RS26435 0.74 +0.2 5,895,372 + QEN71_RS26435 0.74 +0.0 5,895,372 + QEN71_RS26435 0.74 -0.4 5,895,372 + QEN71_RS26435 0.74 -1.1 5,895,372 + QEN71_RS26435 0.74 -0.2 5,895,373 - QEN71_RS26435 0.74 -1.1 5,895,413 + QEN71_RS26435 0.76 +1.0 5,895,441 + QEN71_RS26435 0.77 -1.3 5,895,690 + QEN71_RS26435 0.89 -1.4 5,895,691 - QEN71_RS26435 0.89 -0.8 5,895,691 - QEN71_RS26435 0.89 +1.5 5,895,864 + +0.2 5,895,864 + -1.1 5,895,865 - +0.5 5,895,865 - -1.9 5,895,865 - -0.0 5,896,174 + QEN71_RS26440 0.24 -0.6 5,896,350 + QEN71_RS26440 0.42 -0.3 5,896,465 - QEN71_RS26440 0.54 -0.3 5,896,535 - QEN71_RS26440 0.61 -0.3 5,896,900 + -0.6
Or see this region's nucleotide sequence