Experiment: succinate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS44565 and QEN71_RS44570 are separated by 309 nucleotides QEN71_RS44570 and QEN71_RS44575 are separated by 61 nucleotides QEN71_RS44575 and QEN71_RS44580 overlap by 17 nucleotides QEN71_RS44580 and QEN71_RS44585 overlap by 4 nucleotides
QEN71_RS44565: QEN71_RS44565 - IS91 family transposase, at 381,290 to 382,495
_RS44565
QEN71_RS44570: QEN71_RS44570 - hypothetical protein, at 382,805 to 383,287
_RS44570
QEN71_RS44575: QEN71_RS44575 - hypothetical protein, at 383,349 to 383,699
_RS44575
QEN71_RS44580: QEN71_RS44580 - ATP-binding protein, at 383,683 to 384,436
_RS44580
QEN71_RS44585: QEN71_RS44585 - hypothetical protein, at 384,433 to 384,654
_RS44585
Position (kb) 383
384 Strain fitness (log2 ratio) -2
-1
0
1 at 382.854 kb on + strand, within QEN71_RS44570 at 383.034 kb on + strand, within QEN71_RS44570 at 383.035 kb on - strand, within QEN71_RS44570 at 383.136 kb on - strand, within QEN71_RS44570 at 383.159 kb on + strand, within QEN71_RS44570 at 383.188 kb on + strand, within QEN71_RS44570 at 383.189 kb on - strand, within QEN71_RS44570 at 383.199 kb on + strand, within QEN71_RS44570 at 383.199 kb on + strand, within QEN71_RS44570 at 383.258 kb on + strand at 383.258 kb on + strand at 383.258 kb on + strand at 383.258 kb on + strand at 383.258 kb on + strand at 383.258 kb on + strand at 383.258 kb on + strand at 383.258 kb on + strand at 383.259 kb on - strand at 383.259 kb on - strand at 383.259 kb on - strand at 383.259 kb on - strand at 383.259 kb on - strand at 383.266 kb on + strand at 383.266 kb on + strand at 383.267 kb on - strand at 383.285 kb on + strand at 383.285 kb on + strand at 383.285 kb on + strand at 383.285 kb on + strand at 383.286 kb on - strand at 383.392 kb on + strand, within QEN71_RS44575 at 383.393 kb on - strand, within QEN71_RS44575 at 383.655 kb on + strand, within QEN71_RS44575 at 383.655 kb on + strand, within QEN71_RS44575 at 383.655 kb on + strand, within QEN71_RS44575 at 383.656 kb on - strand, within QEN71_RS44575 at 383.656 kb on - strand, within QEN71_RS44575 at 383.735 kb on - strand at 384.056 kb on + strand, within QEN71_RS44580 at 384.133 kb on - strand, within QEN71_RS44580 at 384.166 kb on + strand, within QEN71_RS44580 at 384.166 kb on + strand, within QEN71_RS44580 at 384.166 kb on + strand, within QEN71_RS44580 at 384.167 kb on - strand, within QEN71_RS44580 at 384.167 kb on - strand, within QEN71_RS44580 at 384.171 kb on + strand, within QEN71_RS44580 at 384.172 kb on - strand, within QEN71_RS44580 at 384.228 kb on + strand, within QEN71_RS44580 at 384.228 kb on + strand, within QEN71_RS44580 at 384.251 kb on + strand, within QEN71_RS44580 at 384.357 kb on - strand, within QEN71_RS44580 at 384.357 kb on - strand, within QEN71_RS44580 at 384.407 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction succinate (C) remove 382,854 + QEN71_RS44570 0.10 -1.2 383,034 + QEN71_RS44570 0.47 -0.8 383,035 - QEN71_RS44570 0.48 -0.7 383,136 - QEN71_RS44570 0.69 +0.2 383,159 + QEN71_RS44570 0.73 -0.1 383,188 + QEN71_RS44570 0.79 +1.2 383,189 - QEN71_RS44570 0.80 -0.7 383,199 + QEN71_RS44570 0.82 +0.6 383,199 + QEN71_RS44570 0.82 +0.0 383,258 + -1.2 383,258 + -0.7 383,258 + -0.5 383,258 + -0.3 383,258 + +0.6 383,258 + -0.0 383,258 + -0.1 383,258 + -0.1 383,259 - -0.6 383,259 - +0.8 383,259 - -0.2 383,259 - +0.7 383,259 - -0.9 383,266 + -0.3 383,266 + +0.6 383,267 - -0.6 383,285 + +0.9 383,285 + +0.6 383,285 + +0.2 383,285 + +0.4 383,286 - -0.6 383,392 + QEN71_RS44575 0.12 +1.0 383,393 - QEN71_RS44575 0.13 +0.6 383,655 + QEN71_RS44575 0.87 +0.7 383,655 + QEN71_RS44575 0.87 +0.2 383,655 + QEN71_RS44575 0.87 -1.1 383,656 - QEN71_RS44575 0.87 -0.1 383,656 - QEN71_RS44575 0.87 -0.7 383,735 - -0.7 384,056 + QEN71_RS44580 0.49 +1.6 384,133 - QEN71_RS44580 0.60 +1.0 384,166 + QEN71_RS44580 0.64 -0.1 384,166 + QEN71_RS44580 0.64 -1.8 384,166 + QEN71_RS44580 0.64 +1.1 384,167 - QEN71_RS44580 0.64 +0.8 384,167 - QEN71_RS44580 0.64 -0.2 384,171 + QEN71_RS44580 0.65 -0.4 384,172 - QEN71_RS44580 0.65 +0.3 384,228 + QEN71_RS44580 0.72 +0.0 384,228 + QEN71_RS44580 0.72 +1.3 384,251 + QEN71_RS44580 0.75 +1.4 384,357 - QEN71_RS44580 0.89 +0.5 384,357 - QEN71_RS44580 0.89 -1.0 384,407 - -1.3
Or see this region's nucleotide sequence