Experiment: succinate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS37700 and QEN71_RS37705 are separated by 67 nucleotides QEN71_RS37705 and QEN71_RS37710 are separated by 104 nucleotides
QEN71_RS37700: QEN71_RS37700 - MFS transporter, at 1,825,243 to 1,826,532
_RS37700
QEN71_RS37705: QEN71_RS37705 - LacI family DNA-binding transcriptional regulator, at 1,826,600 to 1,827,643
_RS37705
QEN71_RS37710: QEN71_RS37710 - NAD(P)-dependent oxidoreductase, at 1,827,748 to 1,828,581
_RS37710
Position (kb)
1826
1827
1828 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1825.747 kb on + strand, within QEN71_RS37700 at 1825.747 kb on + strand, within QEN71_RS37700 at 1825.747 kb on + strand, within QEN71_RS37700 at 1825.747 kb on + strand, within QEN71_RS37700 at 1825.748 kb on - strand, within QEN71_RS37700 at 1825.748 kb on - strand, within QEN71_RS37700 at 1825.819 kb on + strand, within QEN71_RS37700 at 1825.819 kb on + strand, within QEN71_RS37700 at 1825.999 kb on + strand, within QEN71_RS37700 at 1826.000 kb on - strand, within QEN71_RS37700 at 1826.000 kb on - strand, within QEN71_RS37700 at 1826.000 kb on - strand, within QEN71_RS37700 at 1826.000 kb on - strand, within QEN71_RS37700 at 1826.080 kb on + strand, within QEN71_RS37700 at 1826.081 kb on - strand, within QEN71_RS37700 at 1826.081 kb on - strand, within QEN71_RS37700 at 1826.465 kb on - strand at 1826.574 kb on + strand at 1826.574 kb on + strand at 1826.760 kb on + strand, within QEN71_RS37705 at 1826.868 kb on + strand, within QEN71_RS37705 at 1826.869 kb on - strand, within QEN71_RS37705 at 1827.048 kb on + strand, within QEN71_RS37705 at 1827.049 kb on - strand, within QEN71_RS37705 at 1827.096 kb on + strand, within QEN71_RS37705 at 1827.096 kb on + strand, within QEN71_RS37705 at 1827.097 kb on - strand, within QEN71_RS37705 at 1827.097 kb on - strand, within QEN71_RS37705 at 1827.097 kb on - strand, within QEN71_RS37705 at 1827.097 kb on - strand, within QEN71_RS37705 at 1827.097 kb on - strand, within QEN71_RS37705 at 1827.097 kb on - strand, within QEN71_RS37705 at 1827.097 kb on - strand, within QEN71_RS37705 at 1827.312 kb on + strand, within QEN71_RS37705 at 1827.313 kb on - strand, within QEN71_RS37705 at 1827.519 kb on + strand, within QEN71_RS37705 at 1827.519 kb on + strand, within QEN71_RS37705 at 1827.519 kb on + strand, within QEN71_RS37705 at 1827.519 kb on + strand, within QEN71_RS37705 at 1827.519 kb on + strand, within QEN71_RS37705 at 1827.520 kb on - strand, within QEN71_RS37705 at 1827.520 kb on - strand, within QEN71_RS37705 at 1827.520 kb on - strand, within QEN71_RS37705 at 1827.708 kb on + strand at 1828.048 kb on + strand, within QEN71_RS37710 at 1828.048 kb on + strand, within QEN71_RS37710 at 1828.048 kb on + strand, within QEN71_RS37710 at 1828.048 kb on + strand, within QEN71_RS37710 at 1828.048 kb on + strand, within QEN71_RS37710 at 1828.049 kb on - strand, within QEN71_RS37710 at 1828.049 kb on - strand, within QEN71_RS37710 at 1828.049 kb on - strand, within QEN71_RS37710 at 1828.049 kb on - strand, within QEN71_RS37710 at 1828.049 kb on - strand, within QEN71_RS37710 at 1828.049 kb on - strand, within QEN71_RS37710 at 1828.049 kb on - strand, within QEN71_RS37710 at 1828.049 kb on - strand, within QEN71_RS37710 at 1828.049 kb on - strand, within QEN71_RS37710 at 1828.049 kb on - strand, within QEN71_RS37710 at 1828.057 kb on + strand, within QEN71_RS37710 at 1828.057 kb on + strand, within QEN71_RS37710 at 1828.058 kb on - strand, within QEN71_RS37710 at 1828.058 kb on - strand, within QEN71_RS37710 at 1828.180 kb on + strand, within QEN71_RS37710 at 1828.181 kb on - strand, within QEN71_RS37710 at 1828.181 kb on - strand, within QEN71_RS37710 at 1828.181 kb on - strand, within QEN71_RS37710 at 1828.181 kb on - strand, within QEN71_RS37710 at 1828.219 kb on + strand, within QEN71_RS37710 at 1828.222 kb on + strand, within QEN71_RS37710 at 1828.222 kb on + strand, within QEN71_RS37710 at 1828.222 kb on + strand, within QEN71_RS37710 at 1828.223 kb on - strand, within QEN71_RS37710 at 1828.223 kb on - strand, within QEN71_RS37710 at 1828.223 kb on - strand, within QEN71_RS37710 at 1828.309 kb on + strand, within QEN71_RS37710 at 1828.309 kb on + strand, within QEN71_RS37710 at 1828.309 kb on + strand, within QEN71_RS37710 at 1828.309 kb on + strand, within QEN71_RS37710 at 1828.310 kb on - strand, within QEN71_RS37710 at 1828.310 kb on - strand, within QEN71_RS37710 at 1828.318 kb on + strand, within QEN71_RS37710 at 1828.384 kb on + strand, within QEN71_RS37710 at 1828.385 kb on - strand, within QEN71_RS37710 at 1828.385 kb on - strand, within QEN71_RS37710 at 1828.511 kb on - strand at 1828.511 kb on - strand at 1828.592 kb on + strand at 1828.592 kb on + strand at 1828.592 kb on + strand at 1828.593 kb on - strand at 1828.593 kb on - strand at 1828.600 kb on + strand at 1828.600 kb on + strand at 1828.600 kb on + strand at 1828.600 kb on + strand at 1828.601 kb on - strand at 1828.632 kb on + strand at 1828.632 kb on + strand at 1828.632 kb on + strand at 1828.632 kb on + strand at 1828.632 kb on + strand at 1828.633 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction succinate (C) remove 1,825,747 + QEN71_RS37700 0.39 -1.6 1,825,747 + QEN71_RS37700 0.39 +0.1 1,825,747 + QEN71_RS37700 0.39 -0.7 1,825,747 + QEN71_RS37700 0.39 -0.2 1,825,748 - QEN71_RS37700 0.39 -0.8 1,825,748 - QEN71_RS37700 0.39 -1.5 1,825,819 + QEN71_RS37700 0.45 -0.3 1,825,819 + QEN71_RS37700 0.45 -0.5 1,825,999 + QEN71_RS37700 0.59 -2.3 1,826,000 - QEN71_RS37700 0.59 +1.9 1,826,000 - QEN71_RS37700 0.59 -0.3 1,826,000 - QEN71_RS37700 0.59 +0.1 1,826,000 - QEN71_RS37700 0.59 +1.3 1,826,080 + QEN71_RS37700 0.65 -1.2 1,826,081 - QEN71_RS37700 0.65 +0.1 1,826,081 - QEN71_RS37700 0.65 -0.5 1,826,465 - -0.7 1,826,574 + +0.4 1,826,574 + -0.5 1,826,760 + QEN71_RS37705 0.15 -0.1 1,826,868 + QEN71_RS37705 0.26 +0.0 1,826,869 - QEN71_RS37705 0.26 -0.1 1,827,048 + QEN71_RS37705 0.43 +1.2 1,827,049 - QEN71_RS37705 0.43 +0.4 1,827,096 + QEN71_RS37705 0.48 -0.9 1,827,096 + QEN71_RS37705 0.48 -0.5 1,827,097 - QEN71_RS37705 0.48 -0.7 1,827,097 - QEN71_RS37705 0.48 -1.6 1,827,097 - QEN71_RS37705 0.48 -0.1 1,827,097 - QEN71_RS37705 0.48 +0.6 1,827,097 - QEN71_RS37705 0.48 -0.7 1,827,097 - QEN71_RS37705 0.48 +0.3 1,827,097 - QEN71_RS37705 0.48 -0.4 1,827,312 + QEN71_RS37705 0.68 -1.4 1,827,313 - QEN71_RS37705 0.68 -0.5 1,827,519 + QEN71_RS37705 0.88 -0.7 1,827,519 + QEN71_RS37705 0.88 +1.9 1,827,519 + QEN71_RS37705 0.88 -0.4 1,827,519 + QEN71_RS37705 0.88 -1.1 1,827,519 + QEN71_RS37705 0.88 -1.0 1,827,520 - QEN71_RS37705 0.88 -0.5 1,827,520 - QEN71_RS37705 0.88 +0.5 1,827,520 - QEN71_RS37705 0.88 +1.5 1,827,708 + -0.5 1,828,048 + QEN71_RS37710 0.36 -0.6 1,828,048 + QEN71_RS37710 0.36 -0.4 1,828,048 + QEN71_RS37710 0.36 +0.6 1,828,048 + QEN71_RS37710 0.36 -0.7 1,828,048 + QEN71_RS37710 0.36 -1.2 1,828,049 - QEN71_RS37710 0.36 -0.1 1,828,049 - QEN71_RS37710 0.36 -0.8 1,828,049 - QEN71_RS37710 0.36 +0.1 1,828,049 - QEN71_RS37710 0.36 -2.2 1,828,049 - QEN71_RS37710 0.36 -1.3 1,828,049 - QEN71_RS37710 0.36 -0.7 1,828,049 - QEN71_RS37710 0.36 -2.0 1,828,049 - QEN71_RS37710 0.36 +0.4 1,828,049 - QEN71_RS37710 0.36 -0.3 1,828,049 - QEN71_RS37710 0.36 -0.3 1,828,057 + QEN71_RS37710 0.37 -0.9 1,828,057 + QEN71_RS37710 0.37 +0.4 1,828,058 - QEN71_RS37710 0.37 +0.6 1,828,058 - QEN71_RS37710 0.37 +1.5 1,828,180 + QEN71_RS37710 0.52 -0.7 1,828,181 - QEN71_RS37710 0.52 -0.2 1,828,181 - QEN71_RS37710 0.52 -1.5 1,828,181 - QEN71_RS37710 0.52 -0.0 1,828,181 - QEN71_RS37710 0.52 +0.2 1,828,219 + QEN71_RS37710 0.56 -0.3 1,828,222 + QEN71_RS37710 0.57 -0.1 1,828,222 + QEN71_RS37710 0.57 +0.4 1,828,222 + QEN71_RS37710 0.57 +0.5 1,828,223 - QEN71_RS37710 0.57 +0.2 1,828,223 - QEN71_RS37710 0.57 -1.4 1,828,223 - QEN71_RS37710 0.57 -1.3 1,828,309 + QEN71_RS37710 0.67 -0.2 1,828,309 + QEN71_RS37710 0.67 -0.6 1,828,309 + QEN71_RS37710 0.67 -0.6 1,828,309 + QEN71_RS37710 0.67 +0.8 1,828,310 - QEN71_RS37710 0.67 -0.2 1,828,310 - QEN71_RS37710 0.67 -0.9 1,828,318 + QEN71_RS37710 0.68 +0.4 1,828,384 + QEN71_RS37710 0.76 +1.1 1,828,385 - QEN71_RS37710 0.76 -0.4 1,828,385 - QEN71_RS37710 0.76 -0.9 1,828,511 - -0.3 1,828,511 - +0.3 1,828,592 + +0.4 1,828,592 + -0.4 1,828,592 + -0.8 1,828,593 - -0.1 1,828,593 - -0.2 1,828,600 + -0.1 1,828,600 + +1.5 1,828,600 + +0.4 1,828,600 + -0.9 1,828,601 - +0.1 1,828,632 + -1.5 1,828,632 + -0.6 1,828,632 + -0.4 1,828,632 + +0.3 1,828,632 + -0.2 1,828,633 - -0.4
Or see this region's nucleotide sequence