Strain Fitness in Paraburkholderia sabiae LMG 24235 around QEN71_RS29045

Experiment: succinate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	succinate (C)
6,437,864	+		QEN71_RS29040	0.44	-0.4
6,437,865	-		QEN71_RS29040	0.44	-0.3
6,437,918	+		QEN71_RS29040	0.49	+0.3
6,437,918	+		QEN71_RS29040	0.49	+1.0
6,437,918	+		QEN71_RS29040	0.49	+1.6
6,437,918	+		QEN71_RS29040	0.49	-1.4
6,437,918	+		QEN71_RS29040	0.49	+0.2
6,437,919	-		QEN71_RS29040	0.49	-0.1
6,437,919	-		QEN71_RS29040	0.49	-0.4
6,437,919	-		QEN71_RS29040	0.49	-0.1
6,437,919	-		QEN71_RS29040	0.49	+0.0
6,437,919	-		QEN71_RS29040	0.49	+0.5
6,437,919	-		QEN71_RS29040	0.49	-0.7
6,437,919	-		QEN71_RS29040	0.49	+0.7
6,437,938	+		QEN71_RS29040	0.51	-0.3
6,437,938	+		QEN71_RS29040	0.51	+0.6
6,437,938	+		QEN71_RS29040	0.51	-0.0
6,437,939	-		QEN71_RS29040	0.51	-0.4
6,437,939	-		QEN71_RS29040	0.51	+0.4
6,437,939	-		QEN71_RS29040	0.51	+0.6
6,437,963	-		QEN71_RS29040	0.53	+0.0
6,438,038	+		QEN71_RS29040	0.60	+0.0
6,438,038	+		QEN71_RS29040	0.60	-0.4
6,438,038	+		QEN71_RS29040	0.60	-0.0
6,438,038	+		QEN71_RS29040	0.60	+0.8
6,438,038	+		QEN71_RS29040	0.60	+0.6
6,438,038	+		QEN71_RS29040	0.60	-0.3
6,438,039	-		QEN71_RS29040	0.60	-0.2
6,438,039	-		QEN71_RS29040	0.60	-0.1
6,438,039	-		QEN71_RS29040	0.60	+0.3
6,438,039	-		QEN71_RS29040	0.60	-2.4
6,438,039	-		QEN71_RS29040	0.60	-1.1
6,438,039	-		QEN71_RS29040	0.60	-0.1
6,438,272	+		QEN71_RS29040	0.82	+0.5
6,438,272	+		QEN71_RS29040	0.82	-0.7
6,438,272	+		QEN71_RS29040	0.82	-1.0
6,438,272	+		QEN71_RS29040	0.82	+0.6
6,438,272	+		QEN71_RS29040	0.82	-0.2
6,438,272	+		QEN71_RS29040	0.82	-1.0
6,438,272	+		QEN71_RS29040	0.82	-0.1
6,438,272	+		QEN71_RS29040	0.82	-0.7
6,438,272	+		QEN71_RS29040	0.82	+0.2
6,438,272	+		QEN71_RS29040	0.82	-0.4
6,438,273	-		QEN71_RS29040	0.82	-0.9
6,438,273	-		QEN71_RS29040	0.82	-0.1
6,438,273	-		QEN71_RS29040	0.82	+0.3
6,438,273	-		QEN71_RS29040	0.82	+0.9
6,438,273	-		QEN71_RS29040	0.82	+1.5
6,438,273	-		QEN71_RS29040	0.82	+0.9
6,438,316	+		QEN71_RS29040	0.86	+1.5
6,438,392	+				+0.4
6,438,392	+				-0.1
6,438,392	+				-0.4
6,438,393	-				+1.9
6,438,393	-				-0.7
6,438,393	-				-0.3
6,438,393	-				-1.4
6,438,393	-				+1.3
6,438,393	-				-0.7
6,438,393	-				+1.1
6,438,393	-				-0.0
6,438,404	+				-1.0
6,438,404	+				+0.4
6,438,404	+				+0.0
6,438,404	+				-1.3
6,438,404	+				-0.6
6,438,405	-				+0.7
6,438,405	-				+0.8
6,438,405	-				-1.0
6,438,405	-				+0.4
6,438,405	-				-0.0
6,438,405	-				-0.8
6,438,499	+				+2.2
6,438,499	+				+0.3
6,438,499	+				-0.5
6,438,499	+				-0.1
6,438,500	-				-0.6
6,438,500	-				-0.6
6,438,500	-				-0.1
6,438,500	-				+0.7
6,438,500	-				-0.8
6,438,512	+				-1.2
6,438,512	+				+0.1
6,438,512	+				-0.5
6,438,512	+				-0.3
6,438,513	-				-1.1
6,438,513	-				+0.1
6,438,513	-				-1.2
6,438,561	-				-0.6
6,438,656	-				-0.3
6,438,656	-				-0.4
6,438,669	-				+1.1
6,438,669	-				+1.9
6,438,669	-				-1.0
6,438,763	+				-2.3
6,438,763	+				-1.0
6,438,763	+				-0.4
6,438,764	-				-0.9
6,438,764	-				-0.6
6,438,767	+				-0.1
6,438,767	+				-0.6
6,438,767	+				+0.5
6,438,767	+				+0.2
6,438,767	+				-2.4
6,438,767	+				-0.7
6,438,768	-				+0.7
6,438,768	-				-1.8
6,438,768	-				-0.8
6,438,816	+		QEN71_RS29045	0.17	+0.7
6,438,816	+		QEN71_RS29045	0.17	-1.5
6,438,816	+		QEN71_RS29045	0.17	-0.7
6,438,816	+		QEN71_RS29045	0.17	-0.1
6,438,816	+		QEN71_RS29045	0.17	-1.1
6,438,817	-		QEN71_RS29045	0.17	-2.4
6,438,817	-		QEN71_RS29045	0.17	-0.3
6,438,866	+		QEN71_RS29045	0.33	-0.1
6,438,866	+		QEN71_RS29045	0.33	-1.1
6,438,866	+		QEN71_RS29045	0.33	-0.0
6,438,866	+		QEN71_RS29045	0.33	+0.6
6,438,866	+		QEN71_RS29045	0.33	-0.7
6,438,867	-		QEN71_RS29045	0.33	-1.0
6,438,867	-		QEN71_RS29045	0.33	-0.4
6,438,951	-		QEN71_RS29045	0.61	-0.5
6,438,951	-		QEN71_RS29045	0.61	-0.3
6,438,951	-		QEN71_RS29045	0.61	-0.9
6,439,058	+				-1.0
6,439,058	+				-0.2
6,439,058	+				-0.3
6,439,059	-				-1.7
6,439,059	-				+0.9
6,439,059	-				-0.5
6,439,059	-				-1.9
6,439,059	-				-0.4
6,439,059	-				-0.2
6,439,059	-				-0.1
6,439,145	+				+0.7
6,439,146	-				-0.9
6,439,174	+				-0.3
6,439,178	+				-0.2
6,439,181	-				-1.3
6,439,217	-				+1.0
6,439,226	+				+1.4
6,439,227	-				+0.8
6,439,265	+				-1.0
6,439,265	+				-0.3
6,439,265	+				+0.1
6,439,265	+				-1.1
6,439,266	-				-0.4
6,439,266	-				+0.4
6,439,280	+				+0.9
6,439,345	-				+0.5
6,439,410	+				-1.1
6,439,410	+				+0.4
6,439,413	+				-1.8
6,439,413	+				-0.9
6,439,413	+				-0.4
6,439,413	+				+0.5
6,439,413	+				+0.2
6,439,413	+				+0.1
6,439,413	+				+0.5
6,439,413	+				-0.2
6,439,413	+				-1.7
6,439,413	+				-0.6
6,439,414	-				+0.4
6,439,414	-				+1.2
6,439,414	-				+0.5
6,439,414	-				-0.7
6,439,529	+		QEN71_RS29050	0.23	-1.9
6,439,530	-		QEN71_RS29050	0.23	+0.9
6,439,530	-		QEN71_RS29050	0.23	+1.4
6,439,530	-		QEN71_RS29050	0.23	-0.9
6,439,530	-		QEN71_RS29050	0.23	-0.7
6,439,543	+		QEN71_RS29050	0.25	+0.0
6,439,544	-		QEN71_RS29050	0.25	+1.9
6,439,625	+		QEN71_RS29050	0.36	-0.4
6,439,625	+		QEN71_RS29050	0.36	+0.2
6,439,625	+		QEN71_RS29050	0.36	+0.4
6,439,625	+		QEN71_RS29050	0.36	-0.4
6,439,625	+		QEN71_RS29050	0.36	+0.1
6,439,625	+		QEN71_RS29050	0.36	+1.2
6,439,625	+		QEN71_RS29050	0.36	-0.7
6,439,625	+		QEN71_RS29050	0.36	-3.4
6,439,625	+		QEN71_RS29050	0.36	+0.1
6,439,625	+		QEN71_RS29050	0.36	+1.2
6,439,625	+		QEN71_RS29050	0.36	-0.1
6,439,625	+		QEN71_RS29050	0.36	-0.1
6,439,625	+		QEN71_RS29050	0.36	-0.9
6,439,626	-		QEN71_RS29050	0.36	+0.3
6,439,626	-		QEN71_RS29050	0.36	-0.8
6,439,626	-		QEN71_RS29050	0.36	+1.9
6,439,626	-		QEN71_RS29050	0.36	-0.6
6,439,626	-		QEN71_RS29050	0.36	-0.3
6,439,626	-		QEN71_RS29050	0.36	-0.2
6,439,626	-		QEN71_RS29050	0.36	-0.2
6,439,630	-		QEN71_RS29050	0.36	-0.6
6,439,664	+		QEN71_RS29050	0.41	+0.5
6,439,664	+		QEN71_RS29050	0.41	+1.9
6,439,664	+		QEN71_RS29050	0.41	-1.4
6,439,664	+		QEN71_RS29050	0.41	-0.3
6,439,664	+		QEN71_RS29050	0.41	-0.1
6,439,664	+		QEN71_RS29050	0.41	-1.7
6,439,665	-		QEN71_RS29050	0.41	+1.1
6,439,665	-		QEN71_RS29050	0.41	+0.6
6,439,665	-		QEN71_RS29050	0.41	-0.1
6,439,665	-		QEN71_RS29050	0.41	+0.2
6,439,665	-		QEN71_RS29050	0.41	-0.5
6,439,665	-		QEN71_RS29050	0.41	+0.7
6,439,760	+		QEN71_RS29050	0.54	+0.3
6,439,760	+		QEN71_RS29050	0.54	+0.5
6,439,760	+		QEN71_RS29050	0.54	+0.7
6,439,760	+		QEN71_RS29050	0.54	-0.2
6,439,760	+		QEN71_RS29050	0.54	-0.3
6,439,761	-		QEN71_RS29050	0.54	-0.4
6,439,761	-		QEN71_RS29050	0.54	-0.2
6,439,761	-		QEN71_RS29050	0.54	-0.3
6,439,761	-		QEN71_RS29050	0.54	+0.3
6,439,761	-		QEN71_RS29050	0.54	-0.3
6,439,761	-		QEN71_RS29050	0.54	-0.0
6,439,761	-		QEN71_RS29050	0.54	-0.4
6,439,864	+		QEN71_RS29050	0.67	+0.3
6,439,864	+		QEN71_RS29050	0.67	-0.4
6,439,864	+		QEN71_RS29050	0.67	-1.1
6,439,864	+		QEN71_RS29050	0.67	-1.2
6,439,864	+		QEN71_RS29050	0.67	-0.6
6,439,864	+		QEN71_RS29050	0.67	+0.5
6,439,865	-		QEN71_RS29050	0.68	-0.1
6,439,865	-		QEN71_RS29050	0.68	-0.9
6,439,865	-		QEN71_RS29050	0.68	-1.5
6,439,921	+		QEN71_RS29050	0.75	+0.1
6,439,921	+		QEN71_RS29050	0.75	+1.6
6,439,921	+		QEN71_RS29050	0.75	-0.7
6,439,921	+		QEN71_RS29050	0.75	-0.7
6,439,922	-		QEN71_RS29050	0.75	-0.4
6,439,922	-		QEN71_RS29050	0.75	+0.1
6,439,922	-		QEN71_RS29050	0.75	-0.5
6,439,922	-		QEN71_RS29050	0.75	+1.0
6,439,922	-		QEN71_RS29050	0.75	+0.1
6,439,922	-		QEN71_RS29050	0.75	-1.0
6,439,922	-		QEN71_RS29050	0.75	+0.9
6,439,922	-		QEN71_RS29050	0.75	+0.3
6,440,043	-				-0.1
6,440,043	-				+1.6
6,440,043	-				-1.1