Strain Fitness in Paraburkholderia sabiae LMG 24235 around QEN71_RS28460

Experiment: succinate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	succinate (C)
6,313,615	+		QEN71_RS28455	0.70	+0.3
6,313,615	+		QEN71_RS28455	0.70	-1.2
6,313,615	+		QEN71_RS28455	0.70	-0.9
6,313,615	+		QEN71_RS28455	0.70	+0.6
6,313,616	-		QEN71_RS28455	0.70	-0.4
6,313,616	-		QEN71_RS28455	0.70	-1.0
6,313,616	-		QEN71_RS28455	0.70	-0.2
6,313,616	-		QEN71_RS28455	0.70	-0.6
6,313,616	-		QEN71_RS28455	0.70	-0.5
6,313,646	+		QEN71_RS28455	0.72	+1.4
6,313,646	+		QEN71_RS28455	0.72	+1.6
6,313,646	+		QEN71_RS28455	0.72	-1.3
6,313,646	+		QEN71_RS28455	0.72	-0.1
6,313,646	+		QEN71_RS28455	0.72	-0.8
6,313,647	-		QEN71_RS28455	0.72	-0.9
6,313,647	-		QEN71_RS28455	0.72	-0.5
6,313,766	+		QEN71_RS28455	0.77	-0.3
6,313,766	+		QEN71_RS28455	0.77	-0.5
6,313,766	+		QEN71_RS28455	0.77	-0.7
6,313,767	-		QEN71_RS28455	0.77	-1.1
6,313,767	-		QEN71_RS28455	0.77	-0.3
6,313,767	-		QEN71_RS28455	0.77	+0.9
6,313,767	-		QEN71_RS28455	0.77	+0.1
6,313,858	+		QEN71_RS28455	0.81	+0.1
6,313,858	+		QEN71_RS28455	0.81	-0.3
6,313,858	+		QEN71_RS28455	0.81	-0.3
6,313,858	+		QEN71_RS28455	0.81	+1.6
6,313,858	+		QEN71_RS28455	0.81	-0.7
6,313,858	+		QEN71_RS28455	0.81	+0.0
6,313,858	+		QEN71_RS28455	0.81	-1.7
6,313,858	+		QEN71_RS28455	0.81	-0.7
6,313,859	-		QEN71_RS28455	0.81	+0.1
6,313,859	-		QEN71_RS28455	0.81	-0.1
6,313,859	-		QEN71_RS28455	0.81	-0.8
6,313,859	-		QEN71_RS28455	0.81	-0.5
6,314,113	+				-0.7
6,314,113	+				+0.8
6,314,113	+				-1.0
6,314,113	+				+1.9
6,314,114	-				+0.2
6,314,140	+				-1.8
6,314,140	+				-1.1
6,314,140	+				-0.6
6,314,140	+				-0.5
6,314,141	-				-0.3
6,314,176	+				-1.8
6,314,177	-				-1.5
6,314,177	-				-0.1
6,314,315	-				+0.7
6,314,315	-				+0.4
6,314,315	-				+1.0
6,314,315	-				-0.1
6,314,315	-				+1.5
6,314,315	-				-0.1
6,314,315	-				-0.2
6,314,461	+				+1.9
6,314,461	+				-0.7
6,314,461	+				-0.6
6,314,461	+				+0.3
6,314,461	+				-0.7
6,314,461	+				-0.3
6,314,461	+				+0.4
6,314,461	+				-0.5
6,314,462	-				+0.2
6,314,462	-				-0.4
6,314,462	-				-0.3
6,314,462	-				-1.4
6,314,462	-				-0.2
6,314,488	+				-0.3
6,314,489	-				-1.2
6,314,489	-				+1.0
6,314,498	-				-0.2
6,314,546	+				-0.1
6,314,547	-				-1.0
6,314,547	-				+0.7
6,314,547	-				-0.3
6,314,589	+				+0.2
6,314,652	+				-0.3
6,314,652	+				-0.2
6,314,652	+				-0.5
6,314,652	+				+1.2
6,314,652	+				+0.7
6,314,653	-				-1.6
6,314,653	-				-0.9
6,314,653	-				-1.0
6,314,653	-				+0.2
6,314,653	-				+0.3
6,314,653	-				-1.2
6,314,653	-				-0.0
6,314,653	-				-1.4
6,314,653	-				+0.3
6,314,653	-				-0.0
6,314,793	+		QEN71_RS28460	0.17	+0.5
6,314,794	-		QEN71_RS28460	0.17	+0.1
6,314,818	-		QEN71_RS28460	0.19	-1.2
6,314,884	+		QEN71_RS28460	0.24	-1.3
6,314,884	+		QEN71_RS28460	0.24	-0.9
6,314,898	+		QEN71_RS28460	0.25	+0.5
6,314,931	+		QEN71_RS28460	0.28	+0.6
6,314,931	+		QEN71_RS28460	0.28	+1.1
6,314,932	-		QEN71_RS28460	0.28	-2.0
6,314,932	-		QEN71_RS28460	0.28	-1.0
6,314,990	-		QEN71_RS28460	0.33	-0.2
6,314,990	-		QEN71_RS28460	0.33	+0.9
6,314,990	-		QEN71_RS28460	0.33	-0.2
6,315,048	+		QEN71_RS28460	0.37	-0.8
6,315,049	-		QEN71_RS28460	0.37	+0.1
6,315,049	-		QEN71_RS28460	0.37	-0.5
6,315,069	+		QEN71_RS28460	0.39	+0.7
6,315,069	+		QEN71_RS28460	0.39	-0.4
6,315,069	+		QEN71_RS28460	0.39	-1.1
6,315,069	+		QEN71_RS28460	0.39	-1.9
6,315,069	+		QEN71_RS28460	0.39	-2.2
6,315,069	+		QEN71_RS28460	0.39	+0.6
6,315,069	+		QEN71_RS28460	0.39	+0.3
6,315,069	+		QEN71_RS28460	0.39	+0.3
6,315,069	+		QEN71_RS28460	0.39	-0.4
6,315,069	+		QEN71_RS28460	0.39	+1.0
6,315,069	+		QEN71_RS28460	0.39	+0.9
6,315,070	-		QEN71_RS28460	0.39	+0.7
6,315,070	-		QEN71_RS28460	0.39	-1.1
6,315,070	-		QEN71_RS28460	0.39	-0.8
6,315,070	-		QEN71_RS28460	0.39	-0.5
6,315,070	-		QEN71_RS28460	0.39	+0.9
6,315,070	-		QEN71_RS28460	0.39	+0.6
6,315,070	-		QEN71_RS28460	0.39	+0.8
6,315,070	-		QEN71_RS28460	0.39	-0.9
6,315,070	-		QEN71_RS28460	0.39	+0.0
6,315,070	-		QEN71_RS28460	0.39	+0.0
6,315,096	+		QEN71_RS28460	0.41	-0.5
6,315,097	-		QEN71_RS28460	0.41	-0.2
6,315,099	+		QEN71_RS28460	0.41	+0.4
6,315,099	+		QEN71_RS28460	0.41	+0.5
6,315,100	-		QEN71_RS28460	0.42	+0.4
6,315,328	+		QEN71_RS28460	0.60	-0.0
6,315,328	+		QEN71_RS28460	0.60	+0.5
6,315,328	+		QEN71_RS28460	0.60	+0.8
6,315,329	-		QEN71_RS28460	0.60	-0.3
6,315,329	-		QEN71_RS28460	0.60	-0.1
6,315,329	-		QEN71_RS28460	0.60	-1.6
6,315,329	-		QEN71_RS28460	0.60	+0.8
6,315,375	+		QEN71_RS28460	0.64	+0.1
6,315,375	+		QEN71_RS28460	0.64	+0.6
6,315,375	+		QEN71_RS28460	0.64	+0.1
6,315,376	-		QEN71_RS28460	0.64	+0.4
6,315,376	-		QEN71_RS28460	0.64	-0.8
6,315,478	-		QEN71_RS28460	0.72	+0.0
6,315,495	+		QEN71_RS28460	0.74	-0.1
6,315,495	+		QEN71_RS28460	0.74	-0.8
6,315,495	+		QEN71_RS28460	0.74	-0.1
6,315,496	-		QEN71_RS28460	0.74	-2.3
6,315,496	-		QEN71_RS28460	0.74	-1.7
6,315,496	-		QEN71_RS28460	0.74	-0.3
6,315,496	-		QEN71_RS28460	0.74	-0.6
6,315,576	+		QEN71_RS28460	0.80	-0.4
6,315,577	-		QEN71_RS28460	0.80	+1.5
6,315,732	+				-1.4
6,315,732	+				+0.3
6,315,733	-				+0.3
6,315,894	-				-0.4
6,315,894	-				+0.7
6,315,931	+				+0.3
6,315,931	+				-0.2
6,315,933	+				+1.9
6,315,933	+				-0.1
6,315,934	-				-0.9
6,315,934	-				-1.0
6,315,934	-				-1.0
6,316,021	-				-0.1
6,316,033	+				+0.2
6,316,102	+				+0.1
6,316,259	+		QEN71_RS28465	0.13	-0.7
6,316,260	-		QEN71_RS28465	0.14	-0.7
6,316,291	-		QEN71_RS28465	0.18	-1.1
6,316,755	+		QEN71_RS28465	0.86	-0.1