Experiment: NL-CCM; spin-x control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_04019 and MPMX19_04020 are separated by 1 nucleotides MPMX19_04020 and MPMX19_04021 are separated by 14 nucleotides
MPMX19_04019: MPMX19_04019 - N-acyl-D-glutamate deacylase, at 314,316 to 315,920
_04019
MPMX19_04020: MPMX19_04020 - putative D,D-dipeptide transport system permease protein DdpC, at 315,922 to 316,830
_04020
MPMX19_04021: MPMX19_04021 - Dipeptide transport system permease protein DppB, at 316,845 to 317,786
_04021
Position (kb) 315
316
317 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 315.070 kb on + strand, within MPMX19_04019 at 315.070 kb on + strand, within MPMX19_04019 at 315.070 kb on + strand, within MPMX19_04019 at 315.070 kb on + strand, within MPMX19_04019 at 315.070 kb on + strand, within MPMX19_04019 at 315.070 kb on + strand, within MPMX19_04019 at 315.070 kb on + strand, within MPMX19_04019 at 315.070 kb on + strand, within MPMX19_04019 at 315.070 kb on + strand, within MPMX19_04019 at 315.070 kb on + strand, within MPMX19_04019 at 315.070 kb on + strand, within MPMX19_04019 at 315.070 kb on + strand, within MPMX19_04019 at 315.070 kb on + strand, within MPMX19_04019 at 315.070 kb on + strand, within MPMX19_04019 at 315.070 kb on + strand, within MPMX19_04019 at 315.070 kb on + strand, within MPMX19_04019 at 315.070 kb on + strand, within MPMX19_04019 at 315.070 kb on + strand, within MPMX19_04019 at 315.070 kb on + strand, within MPMX19_04019 at 315.070 kb on + strand, within MPMX19_04019 at 315.070 kb on + strand, within MPMX19_04019 at 315.070 kb on + strand, within MPMX19_04019 at 315.070 kb on + strand, within MPMX19_04019 at 315.070 kb on + strand, within MPMX19_04019 at 315.070 kb on + strand, within MPMX19_04019 at 315.070 kb on + strand, within MPMX19_04019 at 315.070 kb on + strand, within MPMX19_04019 at 315.070 kb on + strand, within MPMX19_04019 at 315.070 kb on + strand, within MPMX19_04019 at 315.070 kb on + strand, within MPMX19_04019 at 315.070 kb on + strand, within MPMX19_04019 at 315.070 kb on + strand, within MPMX19_04019 at 315.070 kb on + strand, within MPMX19_04019 at 315.070 kb on + strand, within MPMX19_04019 at 315.070 kb on + strand, within MPMX19_04019 at 315.071 kb on - strand, within MPMX19_04019 at 315.071 kb on - strand, within MPMX19_04019 at 315.071 kb on - strand, within MPMX19_04019 at 315.071 kb on - strand, within MPMX19_04019 at 315.071 kb on - strand, within MPMX19_04019 at 315.071 kb on - strand, within MPMX19_04019 at 315.071 kb on - strand, within MPMX19_04019 at 315.071 kb on - strand, within MPMX19_04019 at 315.071 kb on - strand, within MPMX19_04019 at 315.071 kb on - strand, within MPMX19_04019 at 315.071 kb on - strand, within MPMX19_04019 at 315.071 kb on - strand, within MPMX19_04019 at 315.071 kb on - strand, within MPMX19_04019 at 315.071 kb on - strand, within MPMX19_04019 at 315.071 kb on - strand, within MPMX19_04019 at 315.071 kb on - strand, within MPMX19_04019 at 315.071 kb on - strand, within MPMX19_04019 at 315.071 kb on - strand, within MPMX19_04019 at 315.071 kb on - strand, within MPMX19_04019 at 315.071 kb on - strand, within MPMX19_04019 at 315.071 kb on - strand, within MPMX19_04019 at 315.071 kb on - strand, within MPMX19_04019 at 315.071 kb on - strand, within MPMX19_04019 at 315.071 kb on - strand, within MPMX19_04019 at 315.071 kb on - strand, within MPMX19_04019 at 315.071 kb on - strand, within MPMX19_04019 at 315.071 kb on - strand, within MPMX19_04019 at 315.148 kb on + strand, within MPMX19_04019 at 315.148 kb on + strand, within MPMX19_04019 at 315.250 kb on + strand, within MPMX19_04019 at 315.250 kb on + strand, within MPMX19_04019 at 315.250 kb on + strand, within MPMX19_04019 at 315.250 kb on + strand, within MPMX19_04019 at 315.250 kb on + strand, within MPMX19_04019 at 315.250 kb on + strand, within MPMX19_04019 at 315.250 kb on + strand, within MPMX19_04019 at 315.250 kb on + strand, within MPMX19_04019 at 315.250 kb on + strand, within MPMX19_04019 at 315.251 kb on - strand, within MPMX19_04019 at 315.251 kb on - strand, within MPMX19_04019 at 315.251 kb on - strand, within MPMX19_04019 at 315.251 kb on - strand, within MPMX19_04019 at 315.251 kb on - strand, within MPMX19_04019 at 315.634 kb on + strand, within MPMX19_04019 at 315.634 kb on + strand, within MPMX19_04019 at 315.635 kb on - strand, within MPMX19_04019 at 315.635 kb on - strand, within MPMX19_04019 at 315.635 kb on - strand, within MPMX19_04019 at 315.923 kb on + strand at 315.923 kb on + strand at 315.923 kb on + strand at 315.923 kb on + strand at 315.923 kb on + strand at 315.923 kb on + strand at 315.923 kb on + strand at 315.923 kb on + strand at 315.923 kb on + strand at 315.923 kb on + strand at 315.924 kb on - strand at 315.924 kb on - strand at 315.924 kb on - strand at 315.924 kb on - strand at 315.924 kb on - strand at 315.924 kb on - strand at 315.924 kb on - strand at 315.924 kb on - strand at 315.924 kb on - strand at 315.924 kb on - strand at 315.924 kb on - strand at 316.049 kb on + strand, within MPMX19_04020 at 316.049 kb on + strand, within MPMX19_04020 at 316.050 kb on - strand, within MPMX19_04020 at 316.050 kb on - strand, within MPMX19_04020 at 316.050 kb on - strand, within MPMX19_04020 at 316.146 kb on - strand, within MPMX19_04020 at 316.146 kb on - strand, within MPMX19_04020 at 316.316 kb on + strand, within MPMX19_04020 at 316.316 kb on + strand, within MPMX19_04020 at 316.316 kb on + strand, within MPMX19_04020 at 316.316 kb on + strand, within MPMX19_04020 at 316.317 kb on - strand, within MPMX19_04020 at 316.317 kb on - strand, within MPMX19_04020 at 316.317 kb on - strand, within MPMX19_04020 at 316.317 kb on - strand, within MPMX19_04020 at 316.346 kb on + strand, within MPMX19_04020 at 316.346 kb on + strand, within MPMX19_04020 at 316.346 kb on + strand, within MPMX19_04020 at 316.346 kb on + strand, within MPMX19_04020 at 316.346 kb on + strand, within MPMX19_04020 at 316.346 kb on + strand, within MPMX19_04020 at 316.347 kb on - strand, within MPMX19_04020 at 316.347 kb on - strand, within MPMX19_04020 at 316.347 kb on - strand, within MPMX19_04020 at 316.347 kb on - strand, within MPMX19_04020 at 316.347 kb on - strand, within MPMX19_04020 at 316.347 kb on - strand, within MPMX19_04020 at 316.347 kb on - strand, within MPMX19_04020 at 316.347 kb on - strand, within MPMX19_04020 at 316.452 kb on + strand, within MPMX19_04020 at 316.452 kb on + strand, within MPMX19_04020 at 316.452 kb on + strand, within MPMX19_04020 at 316.453 kb on - strand, within MPMX19_04020 at 316.453 kb on - strand, within MPMX19_04020 at 316.454 kb on + strand, within MPMX19_04020 at 316.454 kb on + strand, within MPMX19_04020 at 316.454 kb on + strand, within MPMX19_04020 at 316.454 kb on + strand, within MPMX19_04020 at 316.454 kb on + strand, within MPMX19_04020 at 316.571 kb on + strand, within MPMX19_04020 at 316.571 kb on + strand, within MPMX19_04020 at 316.571 kb on + strand, within MPMX19_04020 at 316.572 kb on - strand, within MPMX19_04020 at 316.869 kb on + strand at 316.876 kb on + strand at 316.876 kb on + strand at 316.876 kb on + strand at 316.877 kb on - strand at 316.877 kb on - strand at 316.909 kb on + strand at 316.909 kb on + strand at 316.909 kb on + strand at 316.909 kb on + strand at 316.909 kb on + strand at 316.909 kb on + strand at 316.909 kb on + strand at 316.909 kb on + strand at 316.909 kb on + strand at 316.909 kb on + strand at 316.909 kb on + strand at 316.909 kb on + strand at 316.909 kb on + strand at 316.909 kb on + strand at 316.909 kb on + strand at 316.909 kb on + strand at 316.909 kb on + strand at 316.909 kb on + strand at 316.909 kb on + strand at 316.909 kb on + strand at 316.909 kb on + strand at 316.909 kb on + strand at 316.910 kb on - strand at 316.910 kb on - strand at 316.910 kb on - strand at 316.910 kb on - strand at 316.910 kb on - strand at 316.910 kb on - strand at 316.910 kb on - strand at 316.910 kb on - strand at 316.910 kb on - strand at 316.910 kb on - strand at 316.910 kb on - strand at 316.910 kb on - strand at 316.910 kb on - strand at 316.910 kb on - strand at 316.910 kb on - strand at 316.910 kb on - strand at 316.910 kb on - strand at 316.910 kb on - strand at 316.910 kb on - strand at 316.910 kb on - strand at 316.910 kb on - strand at 316.910 kb on - strand at 316.910 kb on - strand at 316.910 kb on - strand at 316.910 kb on - strand at 316.910 kb on - strand at 316.910 kb on - strand at 316.910 kb on - strand at 317.152 kb on + strand, within MPMX19_04021 at 317.152 kb on + strand, within MPMX19_04021 at 317.152 kb on + strand, within MPMX19_04021 at 317.152 kb on + strand, within MPMX19_04021 at 317.152 kb on + strand, within MPMX19_04021 at 317.152 kb on + strand, within MPMX19_04021 at 317.152 kb on + strand, within MPMX19_04021 at 317.153 kb on - strand, within MPMX19_04021 at 317.153 kb on - strand, within MPMX19_04021 at 317.153 kb on - strand, within MPMX19_04021 at 317.153 kb on - strand, within MPMX19_04021 at 317.153 kb on - strand, within MPMX19_04021 at 317.153 kb on - strand, within MPMX19_04021 at 317.326 kb on + strand, within MPMX19_04021 at 317.326 kb on + strand, within MPMX19_04021 at 317.326 kb on + strand, within MPMX19_04021 at 317.326 kb on + strand, within MPMX19_04021 at 317.326 kb on + strand, within MPMX19_04021 at 317.326 kb on + strand, within MPMX19_04021 at 317.326 kb on + strand, within MPMX19_04021 at 317.326 kb on + strand, within MPMX19_04021 at 317.326 kb on + strand, within MPMX19_04021 at 317.326 kb on + strand, within MPMX19_04021 at 317.326 kb on + strand, within MPMX19_04021 at 317.327 kb on - strand, within MPMX19_04021 at 317.327 kb on - strand, within MPMX19_04021 at 317.327 kb on - strand, within MPMX19_04021 at 317.327 kb on - strand, within MPMX19_04021 at 317.584 kb on + strand, within MPMX19_04021 at 317.584 kb on + strand, within MPMX19_04021 at 317.584 kb on + strand, within MPMX19_04021 at 317.584 kb on + strand, within MPMX19_04021 at 317.584 kb on + strand, within MPMX19_04021 at 317.585 kb on - strand, within MPMX19_04021 at 317.585 kb on - strand, within MPMX19_04021 at 317.585 kb on - strand, within MPMX19_04021 at 317.585 kb on - strand, within MPMX19_04021 at 317.776 kb on + strand at 317.776 kb on + strand at 317.776 kb on + strand at 317.776 kb on + strand at 317.776 kb on + strand at 317.777 kb on - strand at 317.777 kb on - strand at 317.777 kb on - strand at 317.777 kb on - strand at 317.777 kb on - strand at 317.777 kb on - strand at 317.777 kb on - strand at 317.777 kb on - strand at 317.777 kb on - strand at 317.777 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM; spin-x control remove 315,070 + MPMX19_04019 0.47 -1.8 315,070 + MPMX19_04019 0.47 +0.3 315,070 + MPMX19_04019 0.47 +0.2 315,070 + MPMX19_04019 0.47 -0.4 315,070 + MPMX19_04019 0.47 +0.1 315,070 + MPMX19_04019 0.47 +0.2 315,070 + MPMX19_04019 0.47 +0.4 315,070 + MPMX19_04019 0.47 -1.7 315,070 + MPMX19_04019 0.47 -1.6 315,070 + MPMX19_04019 0.47 -1.2 315,070 + MPMX19_04019 0.47 -0.8 315,070 + MPMX19_04019 0.47 +0.6 315,070 + MPMX19_04019 0.47 -0.7 315,070 + MPMX19_04019 0.47 -1.0 315,070 + MPMX19_04019 0.47 -0.5 315,070 + MPMX19_04019 0.47 -0.1 315,070 + MPMX19_04019 0.47 -0.1 315,070 + MPMX19_04019 0.47 -1.0 315,070 + MPMX19_04019 0.47 -1.0 315,070 + MPMX19_04019 0.47 -0.1 315,070 + MPMX19_04019 0.47 -0.3 315,070 + MPMX19_04019 0.47 -0.4 315,070 + MPMX19_04019 0.47 -1.4 315,070 + MPMX19_04019 0.47 -0.4 315,070 + MPMX19_04019 0.47 -0.9 315,070 + MPMX19_04019 0.47 -0.2 315,070 + MPMX19_04019 0.47 -2.3 315,070 + MPMX19_04019 0.47 -2.6 315,070 + MPMX19_04019 0.47 -0.2 315,070 + MPMX19_04019 0.47 +0.0 315,070 + MPMX19_04019 0.47 +0.1 315,070 + MPMX19_04019 0.47 +0.9 315,070 + MPMX19_04019 0.47 +0.6 315,070 + MPMX19_04019 0.47 -0.5 315,070 + MPMX19_04019 0.47 -0.2 315,071 - MPMX19_04019 0.47 -1.4 315,071 - MPMX19_04019 0.47 -1.4 315,071 - MPMX19_04019 0.47 +1.0 315,071 - MPMX19_04019 0.47 -0.6 315,071 - MPMX19_04019 0.47 +0.6 315,071 - MPMX19_04019 0.47 -1.2 315,071 - MPMX19_04019 0.47 -0.2 315,071 - MPMX19_04019 0.47 +0.2 315,071 - MPMX19_04019 0.47 -1.2 315,071 - MPMX19_04019 0.47 +0.5 315,071 - MPMX19_04019 0.47 -1.3 315,071 - MPMX19_04019 0.47 +0.2 315,071 - MPMX19_04019 0.47 +1.4 315,071 - MPMX19_04019 0.47 -0.7 315,071 - MPMX19_04019 0.47 -0.3 315,071 - MPMX19_04019 0.47 +1.3 315,071 - MPMX19_04019 0.47 -0.6 315,071 - MPMX19_04019 0.47 +0.6 315,071 - MPMX19_04019 0.47 +0.6 315,071 - MPMX19_04019 0.47 -2.2 315,071 - MPMX19_04019 0.47 -2.6 315,071 - MPMX19_04019 0.47 -0.2 315,071 - MPMX19_04019 0.47 +0.4 315,071 - MPMX19_04019 0.47 -0.1 315,071 - MPMX19_04019 0.47 -1.2 315,071 - MPMX19_04019 0.47 -1.6 315,071 - MPMX19_04019 0.47 -0.6 315,148 + MPMX19_04019 0.52 -0.6 315,148 + MPMX19_04019 0.52 -1.7 315,250 + MPMX19_04019 0.58 -0.5 315,250 + MPMX19_04019 0.58 +0.7 315,250 + MPMX19_04019 0.58 -0.1 315,250 + MPMX19_04019 0.58 -0.7 315,250 + MPMX19_04019 0.58 -0.4 315,250 + MPMX19_04019 0.58 +1.5 315,250 + MPMX19_04019 0.58 -1.4 315,250 + MPMX19_04019 0.58 +1.3 315,250 + MPMX19_04019 0.58 -2.0 315,251 - MPMX19_04019 0.58 -0.2 315,251 - MPMX19_04019 0.58 +0.8 315,251 - MPMX19_04019 0.58 +0.3 315,251 - MPMX19_04019 0.58 -0.1 315,251 - MPMX19_04019 0.58 -1.4 315,634 + MPMX19_04019 0.82 +0.7 315,634 + MPMX19_04019 0.82 +0.7 315,635 - MPMX19_04019 0.82 -0.6 315,635 - MPMX19_04019 0.82 -0.4 315,635 - MPMX19_04019 0.82 +1.5 315,923 + +1.9 315,923 + -0.2 315,923 + -1.2 315,923 + +0.2 315,923 + -0.1 315,923 + +0.0 315,923 + +0.0 315,923 + +0.4 315,923 + +0.5 315,923 + -0.2 315,924 - +0.5 315,924 - -1.1 315,924 - -0.0 315,924 - +0.0 315,924 - -2.1 315,924 - +1.5 315,924 - +0.5 315,924 - +0.0 315,924 - +0.6 315,924 - +1.4 315,924 - -0.3 316,049 + MPMX19_04020 0.14 -0.6 316,049 + MPMX19_04020 0.14 +0.0 316,050 - MPMX19_04020 0.14 +0.6 316,050 - MPMX19_04020 0.14 -1.6 316,050 - MPMX19_04020 0.14 -0.6 316,146 - MPMX19_04020 0.25 -0.8 316,146 - MPMX19_04020 0.25 -1.2 316,316 + MPMX19_04020 0.43 +0.4 316,316 + MPMX19_04020 0.43 -0.7 316,316 + MPMX19_04020 0.43 +0.6 316,316 + MPMX19_04020 0.43 +2.6 316,317 - MPMX19_04020 0.43 +0.9 316,317 - MPMX19_04020 0.43 +1.9 316,317 - MPMX19_04020 0.43 -1.0 316,317 - MPMX19_04020 0.43 +0.8 316,346 + MPMX19_04020 0.47 -1.0 316,346 + MPMX19_04020 0.47 -0.0 316,346 + MPMX19_04020 0.47 -0.4 316,346 + MPMX19_04020 0.47 +1.0 316,346 + MPMX19_04020 0.47 -2.2 316,346 + MPMX19_04020 0.47 +0.7 316,347 - MPMX19_04020 0.47 +0.4 316,347 - MPMX19_04020 0.47 -2.2 316,347 - MPMX19_04020 0.47 -0.1 316,347 - MPMX19_04020 0.47 -1.8 316,347 - MPMX19_04020 0.47 +0.1 316,347 - MPMX19_04020 0.47 -0.7 316,347 - MPMX19_04020 0.47 +1.6 316,347 - MPMX19_04020 0.47 -0.7 316,452 + MPMX19_04020 0.58 -0.1 316,452 + MPMX19_04020 0.58 -2.6 316,452 + MPMX19_04020 0.58 -0.7 316,453 - MPMX19_04020 0.58 +0.0 316,453 - MPMX19_04020 0.58 -0.6 316,454 + MPMX19_04020 0.59 +1.9 316,454 + MPMX19_04020 0.59 -0.1 316,454 + MPMX19_04020 0.59 -0.1 316,454 + MPMX19_04020 0.59 -0.2 316,454 + MPMX19_04020 0.59 -0.1 316,571 + MPMX19_04020 0.71 -1.8 316,571 + MPMX19_04020 0.71 -0.2 316,571 + MPMX19_04020 0.71 -1.9 316,572 - MPMX19_04020 0.72 -1.1 316,869 + +0.0 316,876 + +0.4 316,876 + +0.8 316,876 + +1.3 316,877 - -0.6 316,877 - -1.9 316,909 + +0.0 316,909 + -1.0 316,909 + +0.8 316,909 + +0.1 316,909 + +0.9 316,909 + -1.6 316,909 + +0.6 316,909 + +0.4 316,909 + +0.3 316,909 + +0.0 316,909 + -0.2 316,909 + -0.8 316,909 + +0.1 316,909 + -0.3 316,909 + +0.2 316,909 + -0.2 316,909 + +0.5 316,909 + +0.2 316,909 + -0.8 316,909 + +0.5 316,909 + +0.4 316,909 + +0.2 316,910 - +1.1 316,910 - -0.4 316,910 - +1.0 316,910 - -0.7 316,910 - -1.3 316,910 - +1.6 316,910 - +0.2 316,910 - -1.1 316,910 - +1.2 316,910 - +0.1 316,910 - -0.7 316,910 - +0.1 316,910 - -0.5 316,910 - +0.4 316,910 - -0.2 316,910 - -1.0 316,910 - -0.2 316,910 - -0.6 316,910 - +0.5 316,910 - -1.1 316,910 - -0.1 316,910 - +0.0 316,910 - +0.0 316,910 - -1.4 316,910 - +0.3 316,910 - +0.4 316,910 - +0.0 316,910 - -2.4 317,152 + MPMX19_04021 0.33 -2.2 317,152 + MPMX19_04021 0.33 -0.5 317,152 + MPMX19_04021 0.33 +0.3 317,152 + MPMX19_04021 0.33 -0.3 317,152 + MPMX19_04021 0.33 -1.2 317,152 + MPMX19_04021 0.33 -0.8 317,152 + MPMX19_04021 0.33 -1.0 317,153 - MPMX19_04021 0.33 -1.2 317,153 - MPMX19_04021 0.33 -0.1 317,153 - MPMX19_04021 0.33 +0.8 317,153 - MPMX19_04021 0.33 -2.9 317,153 - MPMX19_04021 0.33 -0.1 317,153 - MPMX19_04021 0.33 +1.0 317,326 + MPMX19_04021 0.51 +0.3 317,326 + MPMX19_04021 0.51 +0.7 317,326 + MPMX19_04021 0.51 +1.2 317,326 + MPMX19_04021 0.51 -0.5 317,326 + MPMX19_04021 0.51 -0.4 317,326 + MPMX19_04021 0.51 +0.2 317,326 + MPMX19_04021 0.51 +0.9 317,326 + MPMX19_04021 0.51 +0.3 317,326 + MPMX19_04021 0.51 -3.0 317,326 + MPMX19_04021 0.51 -0.4 317,326 + MPMX19_04021 0.51 -0.6 317,327 - MPMX19_04021 0.51 +0.0 317,327 - MPMX19_04021 0.51 +0.2 317,327 - MPMX19_04021 0.51 -0.5 317,327 - MPMX19_04021 0.51 -0.5 317,584 + MPMX19_04021 0.78 +1.1 317,584 + MPMX19_04021 0.78 -1.1 317,584 + MPMX19_04021 0.78 -1.0 317,584 + MPMX19_04021 0.78 +0.0 317,584 + MPMX19_04021 0.78 +0.1 317,585 - MPMX19_04021 0.79 -1.2 317,585 - MPMX19_04021 0.79 -1.3 317,585 - MPMX19_04021 0.79 -1.4 317,585 - MPMX19_04021 0.79 -0.6 317,776 + -0.1 317,776 + -0.6 317,776 + -0.3 317,776 + +0.9 317,776 + -0.4 317,777 - +0.3 317,777 - +0.1 317,777 - -0.0 317,777 - +0.6 317,777 - -2.1 317,777 - -0.9 317,777 - -1.7 317,777 - -0.7 317,777 - -0.0 317,777 - -0.2
Or see this region's nucleotide sequence