Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01868

Experiment: NL-CCM; spin-x control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; spin-x control
1,947,878	+		MPMX19_01867	0.51	+1.0
1,947,878	+		MPMX19_01867	0.51	+0.2
1,947,879	-		MPMX19_01867	0.51	+1.3
1,947,893	+		MPMX19_01867	0.52	+0.5
1,947,893	+		MPMX19_01867	0.52	-0.2
1,947,894	-		MPMX19_01867	0.52	+1.1
1,947,894	-		MPMX19_01867	0.52	-0.1
1,947,894	-		MPMX19_01867	0.52	+1.8
1,947,894	-		MPMX19_01867	0.52	-0.9
1,947,958	+		MPMX19_01867	0.56	-0.8
1,947,958	+		MPMX19_01867	0.56	+0.5
1,947,958	+		MPMX19_01867	0.56	-0.0
1,947,958	+		MPMX19_01867	0.56	+0.5
1,947,958	+		MPMX19_01867	0.56	-1.2
1,947,958	+		MPMX19_01867	0.56	-1.2
1,947,959	-		MPMX19_01867	0.56	-0.7
1,947,959	-		MPMX19_01867	0.56	+1.1
1,947,959	-		MPMX19_01867	0.56	-0.4
1,948,088	+		MPMX19_01867	0.65	-1.2
1,948,088	+		MPMX19_01867	0.65	-0.4
1,948,088	+		MPMX19_01867	0.65	-1.3
1,948,088	+		MPMX19_01867	0.65	-0.7
1,948,088	+		MPMX19_01867	0.65	+0.8
1,948,088	+		MPMX19_01867	0.65	-0.5
1,948,088	+		MPMX19_01867	0.65	-1.7
1,948,088	+		MPMX19_01867	0.65	+0.1
1,948,088	+		MPMX19_01867	0.65	-1.8
1,948,088	+		MPMX19_01867	0.65	-1.5
1,948,088	+		MPMX19_01867	0.65	-0.0
1,948,088	+		MPMX19_01867	0.65	-1.0
1,948,088	+		MPMX19_01867	0.65	-0.7
1,948,088	+		MPMX19_01867	0.65	+1.6
1,948,089	-		MPMX19_01867	0.66	+0.5
1,948,089	-		MPMX19_01867	0.66	+0.8
1,948,089	-		MPMX19_01867	0.66	+1.0
1,948,089	-		MPMX19_01867	0.66	-1.6
1,948,089	-		MPMX19_01867	0.66	+0.8
1,948,089	-		MPMX19_01867	0.66	-1.0
1,948,089	-		MPMX19_01867	0.66	+1.5
1,948,089	-		MPMX19_01867	0.66	-1.0
1,948,089	-		MPMX19_01867	0.66	+1.2
1,948,089	-		MPMX19_01867	0.66	+0.8
1,948,089	-		MPMX19_01867	0.66	+0.2
1,948,089	-		MPMX19_01867	0.66	-0.2
1,948,089	-		MPMX19_01867	0.66	+1.1
1,948,089	-		MPMX19_01867	0.66	-0.4
1,948,089	-		MPMX19_01867	0.66	-1.1
1,948,089	-		MPMX19_01867	0.66	-1.5
1,948,089	-		MPMX19_01867	0.66	-1.7
1,948,089	-		MPMX19_01867	0.66	-1.5
1,948,271	+		MPMX19_01867	0.78	-0.8
1,948,271	+		MPMX19_01867	0.78	-0.3
1,948,271	+		MPMX19_01867	0.78	-0.1
1,948,271	+		MPMX19_01867	0.78	-2.2
1,948,272	-		MPMX19_01867	0.78	+0.6
1,948,272	-		MPMX19_01867	0.78	-0.8
1,948,272	-		MPMX19_01867	0.78	-1.1
1,948,272	-		MPMX19_01867	0.78	-0.1
1,948,272	-		MPMX19_01867	0.78	-1.4
1,948,355	+		MPMX19_01867	0.84	+1.5
1,948,355	+		MPMX19_01867	0.84	+0.2
1,948,355	+		MPMX19_01867	0.84	-1.1
1,948,355	+		MPMX19_01867	0.84	-0.2
1,948,355	+		MPMX19_01867	0.84	-0.5
1,948,355	+		MPMX19_01867	0.84	+1.3
1,948,355	+		MPMX19_01867	0.84	-0.1
1,948,355	+		MPMX19_01867	0.84	-0.5
1,948,355	+		MPMX19_01867	0.84	-0.8
1,948,356	-		MPMX19_01867	0.84	-0.5
1,948,356	-		MPMX19_01867	0.84	-1.3
1,948,356	-		MPMX19_01867	0.84	-0.3
1,948,356	-		MPMX19_01867	0.84	+1.1
1,948,356	-		MPMX19_01867	0.84	-0.8
1,948,356	-		MPMX19_01867	0.84	+2.0
1,948,356	-		MPMX19_01867	0.84	+0.9
1,948,356	-		MPMX19_01867	0.84	+0.5
1,948,356	-		MPMX19_01867	0.84	-0.5
1,948,356	-		MPMX19_01867	0.84	+0.1
1,948,356	-		MPMX19_01867	0.84	-0.7
1,948,356	-		MPMX19_01867	0.84	-0.8
1,948,356	-		MPMX19_01867	0.84	-1.5
1,948,382	+		MPMX19_01867	0.86	-0.7
1,948,382	+		MPMX19_01867	0.86	-0.6
1,948,382	+		MPMX19_01867	0.86	-1.4
1,948,382	+		MPMX19_01867	0.86	-0.1
1,948,382	+		MPMX19_01867	0.86	+0.8
1,948,382	+		MPMX19_01867	0.86	-0.5
1,948,382	+		MPMX19_01867	0.86	-1.3
1,948,382	+		MPMX19_01867	0.86	-0.4
1,948,382	+		MPMX19_01867	0.86	-1.5
1,948,382	+		MPMX19_01867	0.86	+0.9
1,948,382	+		MPMX19_01867	0.86	+1.1
1,948,383	-		MPMX19_01867	0.86	-1.5
1,948,383	-		MPMX19_01867	0.86	-0.6
1,948,383	-		MPMX19_01867	0.86	-0.2
1,948,383	-		MPMX19_01867	0.86	+0.1
1,948,383	-		MPMX19_01867	0.86	-0.7
1,948,383	-		MPMX19_01867	0.86	-2.2
1,948,383	-		MPMX19_01867	0.86	+0.5
1,948,383	-		MPMX19_01867	0.86	-0.5
1,948,383	-		MPMX19_01867	0.86	-2.1
1,948,669	+				-0.5
1,948,669	+				+0.0
1,948,669	+				-0.5
1,948,669	+				-0.3
1,948,669	+				-0.6
1,948,669	+				-1.3
1,948,669	+				-2.1
1,948,669	+				+0.3
1,948,669	+				-0.7
1,948,669	+				+0.5
1,948,669	+				+0.3
1,948,669	+				-0.2
1,948,669	+				+1.3
1,948,669	+				-0.9
1,948,669	+				-0.7
1,948,669	+				+0.2
1,948,670	-				+0.7
1,948,670	-				-2.1
1,948,670	-				-1.5
1,948,670	-				+1.9
1,948,670	-				+0.5
1,948,670	-				-0.5
1,948,670	-				+0.2
1,948,670	-				-1.1
1,948,670	-				+1.3
1,948,670	-				-0.6
1,948,670	-				-0.9
1,948,670	-				-0.2
1,948,670	-				-0.8
1,948,670	-				+0.9
1,948,684	+				+0.5
1,948,685	-				-1.1
1,948,685	-				+2.2
1,948,685	-				-0.2
1,948,685	-				+0.3
1,948,685	-				+0.3
1,948,685	-				+0.1
1,949,032	+		MPMX19_01868	0.34	-0.2
1,949,032	+		MPMX19_01868	0.34	-1.8
1,949,033	-		MPMX19_01868	0.34	-2.0
1,949,033	-		MPMX19_01868	0.34	-0.4
1,949,071	+		MPMX19_01868	0.37	-1.4
1,949,071	+		MPMX19_01868	0.37	+0.8
1,949,071	+		MPMX19_01868	0.37	+0.3
1,949,071	+		MPMX19_01868	0.37	+0.2
1,949,071	+		MPMX19_01868	0.37	-0.0
1,949,071	+		MPMX19_01868	0.37	+1.5
1,949,071	+		MPMX19_01868	0.37	-2.0
1,949,071	+		MPMX19_01868	0.37	-1.0
1,949,071	+		MPMX19_01868	0.37	-1.1
1,949,072	-		MPMX19_01868	0.37	+0.7
1,949,072	-		MPMX19_01868	0.37	-1.0
1,949,072	-		MPMX19_01868	0.37	-1.2
1,949,072	-		MPMX19_01868	0.37	+1.3
1,949,072	-		MPMX19_01868	0.37	-0.4
1,949,072	-		MPMX19_01868	0.37	-0.8
1,949,086	+		MPMX19_01868	0.38	+0.6
1,949,086	+		MPMX19_01868	0.38	+0.7
1,949,086	+		MPMX19_01868	0.38	-0.4
1,949,086	+		MPMX19_01868	0.38	-0.1
1,949,086	+		MPMX19_01868	0.38	-1.2
1,949,086	+		MPMX19_01868	0.38	-0.7
1,949,086	+		MPMX19_01868	0.38	+0.6
1,949,086	+		MPMX19_01868	0.38	+0.4
1,949,086	+		MPMX19_01868	0.38	+0.4
1,949,086	+		MPMX19_01868	0.38	-0.7
1,949,086	+		MPMX19_01868	0.38	-0.7
1,949,086	+		MPMX19_01868	0.38	-1.6
1,949,086	+		MPMX19_01868	0.38	-1.7
1,949,086	+		MPMX19_01868	0.38	-0.3
1,949,086	+		MPMX19_01868	0.38	-0.2
1,949,086	+		MPMX19_01868	0.38	-2.6
1,949,086	+		MPMX19_01868	0.38	+0.5
1,949,086	+		MPMX19_01868	0.38	-0.3
1,949,086	+		MPMX19_01868	0.38	-1.3
1,949,086	+		MPMX19_01868	0.38	+0.0
1,949,086	+		MPMX19_01868	0.38	-0.4
1,949,086	+		MPMX19_01868	0.38	-0.8
1,949,086	+		MPMX19_01868	0.38	+0.3
1,949,086	+		MPMX19_01868	0.38	+0.5
1,949,086	+		MPMX19_01868	0.38	+0.1
1,949,086	+		MPMX19_01868	0.38	-0.8
1,949,086	+		MPMX19_01868	0.38	-1.3
1,949,086	+		MPMX19_01868	0.38	-0.0
1,949,086	+		MPMX19_01868	0.38	-0.0
1,949,086	+		MPMX19_01868	0.38	-1.7
1,949,087	-		MPMX19_01868	0.39	-0.0
1,949,087	-		MPMX19_01868	0.39	-0.1
1,949,087	-		MPMX19_01868	0.39	+0.9
1,949,087	-		MPMX19_01868	0.39	-1.5
1,949,087	-		MPMX19_01868	0.39	+0.8
1,949,087	-		MPMX19_01868	0.39	-0.1
1,949,087	-		MPMX19_01868	0.39	+0.1
1,949,087	-		MPMX19_01868	0.39	-0.5
1,949,087	-		MPMX19_01868	0.39	+1.5
1,949,087	-		MPMX19_01868	0.39	-0.2
1,949,087	-		MPMX19_01868	0.39	-1.6
1,949,087	-		MPMX19_01868	0.39	-0.1
1,949,087	-		MPMX19_01868	0.39	-0.7
1,949,087	-		MPMX19_01868	0.39	+1.7
1,949,087	-		MPMX19_01868	0.39	-2.2
1,949,087	-		MPMX19_01868	0.39	+0.3
1,949,087	-		MPMX19_01868	0.39	-1.3
1,949,087	-		MPMX19_01868	0.39	+0.4
1,949,087	-		MPMX19_01868	0.39	-1.3
1,949,087	-		MPMX19_01868	0.39	+1.5
1,949,236	+		MPMX19_01868	0.50	-2.0
1,949,236	+		MPMX19_01868	0.50	-1.3
1,949,237	-		MPMX19_01868	0.50	-0.4
1,949,237	-		MPMX19_01868	0.50	+0.4
1,949,237	-		MPMX19_01868	0.50	+0.5
1,949,275	+		MPMX19_01868	0.53	+0.4
1,949,275	+		MPMX19_01868	0.53	-0.8
1,949,275	+		MPMX19_01868	0.53	-1.6
1,949,275	+		MPMX19_01868	0.53	-1.5
1,949,275	+		MPMX19_01868	0.53	+0.1
1,949,275	+		MPMX19_01868	0.53	+1.5
1,949,275	+		MPMX19_01868	0.53	+0.3
1,949,275	+		MPMX19_01868	0.53	+0.3
1,949,275	+		MPMX19_01868	0.53	-1.2
1,949,275	+		MPMX19_01868	0.53	-0.4
1,949,275	+		MPMX19_01868	0.53	-1.0
1,949,276	-		MPMX19_01868	0.53	+0.1
1,949,276	-		MPMX19_01868	0.53	-0.7
1,949,276	-		MPMX19_01868	0.53	-1.5
1,949,276	-		MPMX19_01868	0.53	-0.1
1,949,276	-		MPMX19_01868	0.53	-1.1
1,949,341	+		MPMX19_01868	0.58	-0.4
1,949,341	+		MPMX19_01868	0.58	-0.7
1,949,341	+		MPMX19_01868	0.58	-0.4
1,949,341	+		MPMX19_01868	0.58	+0.2
1,949,341	+		MPMX19_01868	0.58	+0.3
1,949,341	+		MPMX19_01868	0.58	-0.6
1,949,341	+		MPMX19_01868	0.58	+0.8
1,949,341	+		MPMX19_01868	0.58	-1.0
1,949,341	+		MPMX19_01868	0.58	-1.5
1,949,342	-		MPMX19_01868	0.58	+0.2
1,949,342	-		MPMX19_01868	0.58	-0.7
1,949,342	-		MPMX19_01868	0.58	-0.1
1,949,342	-		MPMX19_01868	0.58	-1.5
1,949,342	-		MPMX19_01868	0.58	-1.5
1,949,342	-		MPMX19_01868	0.58	-1.4
1,949,342	-		MPMX19_01868	0.58	-1.8
1,949,342	-		MPMX19_01868	0.58	+0.0
1,949,342	-		MPMX19_01868	0.58	-0.5
1,949,342	-		MPMX19_01868	0.58	+0.8
1,949,342	-		MPMX19_01868	0.58	-1.0
1,949,872	+				+1.1
1,949,872	+				+0.5
1,949,873	-				+2.0
1,949,978	+				+0.1
1,949,978	+				-1.5
1,949,978	+				+0.2
1,949,978	+				-1.1
1,949,978	+				+1.5
1,949,978	+				+0.0
1,949,978	+				-1.4
1,949,979	-				-1.3
1,949,979	-				-0.7
1,949,979	-				-0.9
1,949,979	-				+0.5
1,949,979	-				+0.8
1,949,979	-				-0.8
1,949,979	-				+0.8
1,949,979	-				+0.2
1,949,979	-				+0.0
1,949,979	-				-2.0
1,949,979	-				-0.7
1,949,979	-				+0.8
1,949,979	-				-1.4
1,949,979	-				-0.3
1,949,979	-				-0.2
1,950,014	+				-2.4
1,950,014	+				-0.3
1,950,014	+				-1.3
1,950,014	+				+0.9
1,950,015	-				+1.0
1,950,015	-				+1.6
1,950,015	-				+1.1
1,950,034	+				-1.9
1,950,034	+				-0.2
1,950,034	+				-1.3
1,950,034	+				+0.1
1,950,034	+				+0.1
1,950,035	-				+0.4
1,950,035	-				-2.0
1,950,035	-				-0.1
1,950,035	-				+0.2
1,950,035	-				-0.2
1,950,035	-				+1.7