Experiment: 2-Deoxy-D-Ribose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS38970 and QEN71_RS38975 are separated by 99 nucleotides QEN71_RS38975 and QEN71_RS38980 are separated by 104 nucleotides QEN71_RS38980 and QEN71_RS38985 are separated by 1 nucleotides
QEN71_RS38970: QEN71_RS38970 - PLP-dependent aminotransferase family protein, at 2,120,252 to 2,121,586
_RS38970
QEN71_RS38975: QEN71_RS38975 - DJ-1/PfpI family protein, at 2,121,686 to 2,122,303
_RS38975
QEN71_RS38980: QEN71_RS38980 - hypothetical protein, at 2,122,408 to 2,122,533
_RS38980
QEN71_RS38985: QEN71_RS38985 - methyl-accepting chemotaxis protein, at 2,122,535 to 2,124,427
_RS38985
Position (kb)
2122
2123 Strain fitness (log2 ratio)
-1
0
1
2
3 at 2121.441 kb on + strand, within QEN71_RS38970 at 2121.550 kb on - strand at 2121.560 kb on + strand at 2121.561 kb on - strand at 2121.570 kb on + strand at 2121.606 kb on + strand at 2121.606 kb on + strand at 2121.606 kb on + strand at 2121.607 kb on - strand at 2121.607 kb on - strand at 2121.629 kb on + strand at 2121.629 kb on + strand at 2121.629 kb on + strand at 2121.645 kb on + strand at 2121.645 kb on + strand at 2121.692 kb on - strand at 2121.845 kb on - strand, within QEN71_RS38975 at 2121.845 kb on - strand, within QEN71_RS38975 at 2121.845 kb on - strand, within QEN71_RS38975 at 2121.966 kb on + strand, within QEN71_RS38975 at 2121.966 kb on + strand, within QEN71_RS38975 at 2121.967 kb on - strand, within QEN71_RS38975 at 2121.967 kb on - strand, within QEN71_RS38975 at 2122.211 kb on + strand, within QEN71_RS38975 at 2122.212 kb on - strand, within QEN71_RS38975 at 2122.212 kb on - strand, within QEN71_RS38975 at 2122.241 kb on + strand, within QEN71_RS38975 at 2122.242 kb on - strand at 2122.345 kb on + strand at 2122.397 kb on + strand at 2122.455 kb on - strand, within QEN71_RS38980 at 2122.543 kb on + strand at 2122.742 kb on + strand, within QEN71_RS38985 at 2122.742 kb on + strand, within QEN71_RS38985 at 2122.742 kb on + strand, within QEN71_RS38985 at 2122.742 kb on + strand, within QEN71_RS38985 at 2122.967 kb on + strand, within QEN71_RS38985 at 2122.968 kb on - strand, within QEN71_RS38985 at 2122.992 kb on - strand, within QEN71_RS38985 at 2123.039 kb on + strand, within QEN71_RS38985 at 2123.071 kb on + strand, within QEN71_RS38985 at 2123.192 kb on + strand, within QEN71_RS38985 at 2123.360 kb on + strand, within QEN71_RS38985 at 2123.363 kb on - strand, within QEN71_RS38985 at 2123.387 kb on + strand, within QEN71_RS38985 at 2123.388 kb on - strand, within QEN71_RS38985
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose (C) remove 2,121,441 + QEN71_RS38970 0.89 -0.5 2,121,550 - +0.0 2,121,560 + -0.0 2,121,561 - +0.4 2,121,570 + -1.1 2,121,606 + +0.3 2,121,606 + +0.4 2,121,606 + -0.8 2,121,607 - -0.4 2,121,607 - +0.2 2,121,629 + +0.2 2,121,629 + +0.4 2,121,629 + +0.6 2,121,645 + +0.4 2,121,645 + -0.3 2,121,692 - +2.2 2,121,845 - QEN71_RS38975 0.26 +0.2 2,121,845 - QEN71_RS38975 0.26 -0.1 2,121,845 - QEN71_RS38975 0.26 -0.2 2,121,966 + QEN71_RS38975 0.45 +0.4 2,121,966 + QEN71_RS38975 0.45 -0.5 2,121,967 - QEN71_RS38975 0.45 +0.3 2,121,967 - QEN71_RS38975 0.45 -0.3 2,122,211 + QEN71_RS38975 0.85 +0.4 2,122,212 - QEN71_RS38975 0.85 +0.2 2,122,212 - QEN71_RS38975 0.85 -0.2 2,122,241 + QEN71_RS38975 0.90 +0.2 2,122,242 - -0.0 2,122,345 + +1.9 2,122,397 + -1.0 2,122,455 - QEN71_RS38980 0.37 -1.7 2,122,543 + -0.0 2,122,742 + QEN71_RS38985 0.11 +0.2 2,122,742 + QEN71_RS38985 0.11 -1.5 2,122,742 + QEN71_RS38985 0.11 -1.2 2,122,742 + QEN71_RS38985 0.11 -0.2 2,122,967 + QEN71_RS38985 0.23 +0.5 2,122,968 - QEN71_RS38985 0.23 -0.3 2,122,992 - QEN71_RS38985 0.24 -0.7 2,123,039 + QEN71_RS38985 0.27 -0.8 2,123,071 + QEN71_RS38985 0.28 +0.1 2,123,192 + QEN71_RS38985 0.35 -0.1 2,123,360 + QEN71_RS38985 0.44 +3.1 2,123,363 - QEN71_RS38985 0.44 -0.5 2,123,387 + QEN71_RS38985 0.45 -0.3 2,123,388 - QEN71_RS38985 0.45 +0.2
Or see this region's nucleotide sequence