Experiment: 2-Deoxy-D-Ribose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS23100 and QEN71_RS23105 are separated by 96 nucleotides QEN71_RS23105 and QEN71_RS23110 overlap by 4 nucleotides QEN71_RS23110 and QEN71_RS23115 are separated by 419 nucleotides
QEN71_RS23100: QEN71_RS23100 - translation initiation factor IF-2, at 5,134,604 to 5,137,504
_RS23100
QEN71_RS23105: QEN71_RS23105 - transcription termination factor NusA, at 5,137,601 to 5,139,076
_RS23105
QEN71_RS23110: QEN71_RS23110 - ribosome maturation factor RimP, at 5,139,073 to 5,139,531
_RS23110
QEN71_RS23115: QEN71_RS23115 - pseudouridine synthase, at 5,139,951 to 5,141,780
_RS23115
Position (kb)
5137
5138
5139
5140 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 5137.516 kb on - strand at 5137.563 kb on - strand at 5137.631 kb on - strand at 5137.631 kb on - strand at 5137.631 kb on - strand at 5137.631 kb on - strand at 5137.631 kb on - strand at 5137.631 kb on - strand at 5137.631 kb on - strand at 5137.631 kb on - strand at 5137.659 kb on - strand at 5139.332 kb on - strand, within QEN71_RS23110 at 5139.332 kb on - strand, within QEN71_RS23110 at 5139.332 kb on - strand, within QEN71_RS23110 at 5139.332 kb on - strand, within QEN71_RS23110 at 5139.355 kb on - strand, within QEN71_RS23110 at 5139.371 kb on - strand, within QEN71_RS23110 at 5139.371 kb on - strand, within QEN71_RS23110 at 5139.371 kb on - strand, within QEN71_RS23110 at 5139.371 kb on - strand, within QEN71_RS23110 at 5139.371 kb on - strand, within QEN71_RS23110 at 5139.436 kb on - strand, within QEN71_RS23110 at 5139.436 kb on - strand, within QEN71_RS23110 at 5139.438 kb on - strand, within QEN71_RS23110 at 5139.438 kb on - strand, within QEN71_RS23110 at 5139.442 kb on - strand, within QEN71_RS23110 at 5139.442 kb on - strand, within QEN71_RS23110 at 5139.442 kb on - strand, within QEN71_RS23110 at 5139.442 kb on - strand, within QEN71_RS23110 at 5139.442 kb on - strand, within QEN71_RS23110 at 5139.442 kb on - strand, within QEN71_RS23110 at 5139.442 kb on - strand, within QEN71_RS23110 at 5139.442 kb on - strand, within QEN71_RS23110 at 5139.442 kb on - strand, within QEN71_RS23110 at 5139.442 kb on - strand, within QEN71_RS23110 at 5139.486 kb on - strand at 5139.486 kb on - strand at 5139.542 kb on - strand at 5139.542 kb on - strand at 5139.542 kb on - strand at 5139.542 kb on - strand at 5139.542 kb on - strand at 5139.542 kb on - strand at 5139.542 kb on - strand at 5139.542 kb on - strand at 5139.542 kb on - strand at 5139.542 kb on - strand at 5139.542 kb on - strand at 5139.542 kb on - strand at 5139.542 kb on - strand at 5139.542 kb on - strand at 5139.542 kb on - strand at 5139.542 kb on - strand at 5139.571 kb on - strand at 5139.571 kb on - strand at 5139.633 kb on - strand at 5139.633 kb on - strand at 5139.633 kb on - strand at 5139.633 kb on - strand at 5139.633 kb on - strand at 5139.633 kb on - strand at 5139.633 kb on - strand at 5139.678 kb on - strand at 5139.678 kb on - strand at 5139.678 kb on - strand at 5139.678 kb on - strand at 5139.678 kb on - strand at 5139.678 kb on - strand at 5139.678 kb on - strand at 5139.708 kb on - strand at 5139.708 kb on - strand at 5139.708 kb on - strand at 5139.708 kb on - strand at 5139.739 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose (C) remove 5,137,516 - +1.8 5,137,563 - +0.2 5,137,631 - -1.0 5,137,631 - -0.6 5,137,631 - -1.6 5,137,631 - -1.3 5,137,631 - -0.3 5,137,631 - -3.4 5,137,631 - -1.4 5,137,631 - +0.3 5,137,659 - +0.9 5,139,332 - QEN71_RS23110 0.56 +0.2 5,139,332 - QEN71_RS23110 0.56 -0.5 5,139,332 - QEN71_RS23110 0.56 +0.5 5,139,332 - QEN71_RS23110 0.56 -0.0 5,139,355 - QEN71_RS23110 0.61 -0.9 5,139,371 - QEN71_RS23110 0.65 -0.6 5,139,371 - QEN71_RS23110 0.65 +0.1 5,139,371 - QEN71_RS23110 0.65 +1.1 5,139,371 - QEN71_RS23110 0.65 +1.1 5,139,371 - QEN71_RS23110 0.65 +0.8 5,139,436 - QEN71_RS23110 0.79 -0.2 5,139,436 - QEN71_RS23110 0.79 +1.0 5,139,438 - QEN71_RS23110 0.80 -0.0 5,139,438 - QEN71_RS23110 0.80 -1.8 5,139,442 - QEN71_RS23110 0.80 +0.5 5,139,442 - QEN71_RS23110 0.80 -1.3 5,139,442 - QEN71_RS23110 0.80 +1.1 5,139,442 - QEN71_RS23110 0.80 +1.0 5,139,442 - QEN71_RS23110 0.80 +1.2 5,139,442 - QEN71_RS23110 0.80 +0.1 5,139,442 - QEN71_RS23110 0.80 +1.5 5,139,442 - QEN71_RS23110 0.80 +1.2 5,139,442 - QEN71_RS23110 0.80 -1.5 5,139,442 - QEN71_RS23110 0.80 +0.5 5,139,486 - -0.6 5,139,486 - -0.2 5,139,542 - -0.3 5,139,542 - -0.8 5,139,542 - +0.5 5,139,542 - -0.0 5,139,542 - +0.4 5,139,542 - -0.2 5,139,542 - +0.7 5,139,542 - +0.8 5,139,542 - +0.7 5,139,542 - -0.2 5,139,542 - -0.0 5,139,542 - -0.3 5,139,542 - -0.1 5,139,542 - -0.9 5,139,542 - -0.0 5,139,542 - -0.1 5,139,571 - +1.4 5,139,571 - -0.4 5,139,633 - +0.7 5,139,633 - +0.5 5,139,633 - -1.8 5,139,633 - -0.6 5,139,633 - +2.1 5,139,633 - +0.4 5,139,633 - -0.4 5,139,678 - -1.5 5,139,678 - +0.5 5,139,678 - -1.2 5,139,678 - -1.3 5,139,678 - +0.5 5,139,678 - -0.3 5,139,678 - -0.8 5,139,708 - -0.4 5,139,708 - -0.3 5,139,708 - -1.5 5,139,708 - +0.2 5,139,739 - -0.1
Or see this region's nucleotide sequence