Experiment: 2-Deoxy-D-Ribose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS21020 and QEN71_RS21025 are separated by 305 nucleotides QEN71_RS21025 and QEN71_RS21030 are separated by 141 nucleotides
QEN71_RS21020: QEN71_RS21020 - FAD-dependent oxidoreductase, at 4,659,032 to 4,660,687
_RS21020
QEN71_RS21025: QEN71_RS21025 - epoxide hydrolase, at 4,660,993 to 4,662,264
_RS21025
QEN71_RS21030: QEN71_RS21030 - trifunctional serine/threonine-protein kinase/ATP-binding protein/sensor histidine kinase, at 4,662,406 to 4,667,502
_RS21030
Position (kb)
4660
4661
4662
4663 Strain fitness (log2 ratio)
-2
-1
0
1 at 4659.999 kb on + strand, within QEN71_RS21020 at 4659.999 kb on + strand, within QEN71_RS21020 at 4660.000 kb on - strand, within QEN71_RS21020 at 4660.000 kb on - strand, within QEN71_RS21020 at 4660.179 kb on + strand, within QEN71_RS21020 at 4660.180 kb on - strand, within QEN71_RS21020 at 4660.180 kb on - strand, within QEN71_RS21020 at 4660.350 kb on - strand, within QEN71_RS21020 at 4660.756 kb on + strand at 4660.756 kb on + strand at 4660.756 kb on + strand at 4660.756 kb on + strand at 4660.757 kb on - strand at 4660.757 kb on - strand at 4660.762 kb on - strand at 4660.780 kb on - strand at 4660.801 kb on + strand at 4660.801 kb on + strand at 4660.802 kb on - strand at 4660.840 kb on - strand at 4660.840 kb on - strand at 4660.843 kb on + strand at 4660.866 kb on - strand at 4660.866 kb on - strand at 4660.866 kb on - strand at 4660.866 kb on - strand at 4660.881 kb on - strand at 4660.911 kb on - strand at 4661.066 kb on + strand at 4661.066 kb on + strand at 4661.083 kb on + strand at 4661.118 kb on + strand at 4661.127 kb on + strand, within QEN71_RS21025 at 4661.153 kb on + strand, within QEN71_RS21025 at 4661.173 kb on - strand, within QEN71_RS21025 at 4661.266 kb on + strand, within QEN71_RS21025 at 4661.312 kb on - strand, within QEN71_RS21025 at 4661.312 kb on - strand, within QEN71_RS21025 at 4661.792 kb on - strand, within QEN71_RS21025 at 4661.911 kb on + strand, within QEN71_RS21025 at 4661.911 kb on + strand, within QEN71_RS21025 at 4661.911 kb on + strand, within QEN71_RS21025 at 4661.935 kb on + strand, within QEN71_RS21025 at 4661.935 kb on + strand, within QEN71_RS21025 at 4661.936 kb on - strand, within QEN71_RS21025 at 4661.998 kb on + strand, within QEN71_RS21025 at 4662.038 kb on - strand, within QEN71_RS21025 at 4662.075 kb on + strand, within QEN71_RS21025 at 4662.166 kb on + strand at 4662.329 kb on - strand at 4662.330 kb on - strand at 4662.340 kb on + strand at 4662.341 kb on - strand at 4662.344 kb on + strand at 4662.345 kb on - strand at 4662.345 kb on - strand at 4662.356 kb on + strand at 4662.373 kb on + strand at 4662.373 kb on + strand at 4662.374 kb on - strand at 4662.374 kb on - strand at 4662.379 kb on + strand at 4662.379 kb on + strand at 4662.380 kb on - strand at 4662.380 kb on - strand at 4662.380 kb on - strand at 4662.380 kb on - strand at 4662.706 kb on - strand at 4662.814 kb on + strand at 4662.814 kb on + strand at 4662.815 kb on - strand at 4662.907 kb on + strand at 4662.907 kb on + strand at 4662.907 kb on + strand at 4662.907 kb on + strand at 4662.907 kb on + strand at 4662.907 kb on + strand at 4662.908 kb on - strand at 4662.908 kb on - strand at 4662.908 kb on - strand at 4662.908 kb on - strand at 4662.988 kb on + strand, within QEN71_RS21030
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose (C) remove 4,659,999 + QEN71_RS21020 0.58 -0.6 4,659,999 + QEN71_RS21020 0.58 -0.5 4,660,000 - QEN71_RS21020 0.58 -0.9 4,660,000 - QEN71_RS21020 0.58 +0.1 4,660,179 + QEN71_RS21020 0.69 -0.6 4,660,180 - QEN71_RS21020 0.69 +0.2 4,660,180 - QEN71_RS21020 0.69 -0.8 4,660,350 - QEN71_RS21020 0.80 -0.9 4,660,756 + -0.2 4,660,756 + +0.3 4,660,756 + -2.4 4,660,756 + -0.5 4,660,757 - -1.0 4,660,757 - +0.5 4,660,762 - -1.5 4,660,780 - +0.0 4,660,801 + -0.5 4,660,801 + +0.6 4,660,802 - +0.8 4,660,840 - -0.1 4,660,840 - +0.3 4,660,843 + -1.3 4,660,866 - +0.6 4,660,866 - +0.4 4,660,866 - +0.7 4,660,866 - +0.2 4,660,881 - -1.2 4,660,911 - +0.1 4,661,066 + +0.3 4,661,066 + +0.9 4,661,083 + -2.2 4,661,118 + -1.4 4,661,127 + QEN71_RS21025 0.11 +0.5 4,661,153 + QEN71_RS21025 0.13 -0.5 4,661,173 - QEN71_RS21025 0.14 -0.5 4,661,266 + QEN71_RS21025 0.21 -0.7 4,661,312 - QEN71_RS21025 0.25 -0.2 4,661,312 - QEN71_RS21025 0.25 +0.1 4,661,792 - QEN71_RS21025 0.63 +0.1 4,661,911 + QEN71_RS21025 0.72 -1.3 4,661,911 + QEN71_RS21025 0.72 -0.7 4,661,911 + QEN71_RS21025 0.72 -2.2 4,661,935 + QEN71_RS21025 0.74 +0.4 4,661,935 + QEN71_RS21025 0.74 +0.3 4,661,936 - QEN71_RS21025 0.74 -0.4 4,661,998 + QEN71_RS21025 0.79 -0.4 4,662,038 - QEN71_RS21025 0.82 +1.3 4,662,075 + QEN71_RS21025 0.85 +0.3 4,662,166 + +0.2 4,662,329 - +0.8 4,662,330 - -0.9 4,662,340 + +0.2 4,662,341 - -0.3 4,662,344 + +0.2 4,662,345 - -1.0 4,662,345 - +0.3 4,662,356 + -0.7 4,662,373 + +0.1 4,662,373 + +0.5 4,662,374 - -0.1 4,662,374 - -0.3 4,662,379 + -0.5 4,662,379 + -0.0 4,662,380 - +0.4 4,662,380 - -1.2 4,662,380 - -1.2 4,662,380 - +0.4 4,662,706 - +0.4 4,662,814 + +0.2 4,662,814 + +0.4 4,662,815 - -0.7 4,662,907 + -0.0 4,662,907 + -0.2 4,662,907 + -0.6 4,662,907 + +0.5 4,662,907 + -1.1 4,662,907 + -0.8 4,662,908 - +0.2 4,662,908 - +0.8 4,662,908 - +0.0 4,662,908 - +0.8 4,662,988 + QEN71_RS21030 0.11 -1.3
Or see this region's nucleotide sequence