Experiment: 2-Deoxy-D-Ribose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS15780 and QEN71_RS15785 are separated by 49 nucleotides QEN71_RS15785 and QEN71_RS15790 are separated by 64 nucleotides
QEN71_RS15780: QEN71_RS15780 - TonB-dependent siderophore receptor, at 3,506,461 to 3,508,683
_RS15780
QEN71_RS15785: QEN71_RS15785 - lysine N(6)-hydroxylase/L-ornithine N(5)-oxygenase family protein, at 3,508,733 to 3,510,133
_RS15785
QEN71_RS15790: QEN71_RS15790 - GNAT family N-acetyltransferase, at 3,510,198 to 3,511,223
_RS15790
Position (kb)
3508
3509
3510
3511 Strain fitness (log2 ratio)
-1
0
1 at 3507.764 kb on + strand, within QEN71_RS15780 at 3507.846 kb on + strand, within QEN71_RS15780 at 3507.858 kb on - strand, within QEN71_RS15780 at 3508.144 kb on + strand, within QEN71_RS15780 at 3508.144 kb on + strand, within QEN71_RS15780 at 3508.332 kb on - strand, within QEN71_RS15780 at 3508.604 kb on + strand at 3508.686 kb on - strand at 3509.218 kb on - strand, within QEN71_RS15785 at 3509.266 kb on - strand, within QEN71_RS15785 at 3509.322 kb on + strand, within QEN71_RS15785 at 3509.454 kb on - strand, within QEN71_RS15785 at 3509.553 kb on + strand, within QEN71_RS15785 at 3509.553 kb on + strand, within QEN71_RS15785 at 3509.829 kb on + strand, within QEN71_RS15785 at 3509.829 kb on + strand, within QEN71_RS15785 at 3509.880 kb on + strand, within QEN71_RS15785 at 3509.880 kb on + strand, within QEN71_RS15785 at 3509.881 kb on - strand, within QEN71_RS15785 at 3510.164 kb on - strand at 3510.382 kb on + strand, within QEN71_RS15790 at 3510.382 kb on + strand, within QEN71_RS15790 at 3510.383 kb on - strand, within QEN71_RS15790 at 3510.517 kb on + strand, within QEN71_RS15790 at 3510.518 kb on - strand, within QEN71_RS15790 at 3510.573 kb on - strand, within QEN71_RS15790 at 3510.573 kb on - strand, within QEN71_RS15790 at 3510.769 kb on + strand, within QEN71_RS15790
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose (C) remove 3,507,764 + QEN71_RS15780 0.59 +0.3 3,507,846 + QEN71_RS15780 0.62 +0.3 3,507,858 - QEN71_RS15780 0.63 -0.2 3,508,144 + QEN71_RS15780 0.76 -0.7 3,508,144 + QEN71_RS15780 0.76 +0.9 3,508,332 - QEN71_RS15780 0.84 -0.9 3,508,604 + -0.2 3,508,686 - -0.5 3,509,218 - QEN71_RS15785 0.35 +0.7 3,509,266 - QEN71_RS15785 0.38 +0.3 3,509,322 + QEN71_RS15785 0.42 +0.2 3,509,454 - QEN71_RS15785 0.51 +1.5 3,509,553 + QEN71_RS15785 0.59 -1.3 3,509,553 + QEN71_RS15785 0.59 -0.4 3,509,829 + QEN71_RS15785 0.78 +1.4 3,509,829 + QEN71_RS15785 0.78 +0.2 3,509,880 + QEN71_RS15785 0.82 -0.1 3,509,880 + QEN71_RS15785 0.82 +0.3 3,509,881 - QEN71_RS15785 0.82 +0.6 3,510,164 - +0.2 3,510,382 + QEN71_RS15790 0.18 -0.1 3,510,382 + QEN71_RS15790 0.18 -0.0 3,510,383 - QEN71_RS15790 0.18 -0.6 3,510,517 + QEN71_RS15790 0.31 +0.5 3,510,518 - QEN71_RS15790 0.31 -1.0 3,510,573 - QEN71_RS15790 0.37 -0.3 3,510,573 - QEN71_RS15790 0.37 -0.1 3,510,769 + QEN71_RS15790 0.56 +0.9
Or see this region's nucleotide sequence