Experiment: 2-Deoxy-D-Ribose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS08210 and QEN71_RS08215 are separated by 40 nucleotides QEN71_RS08215 and QEN71_RS08220 are separated by 19 nucleotides
QEN71_RS08210: QEN71_RS08210 - SDR family oxidoreductase, at 1,819,331 to 1,820,116
_RS08210
QEN71_RS08215: QEN71_RS08215 - DUF1254 domain-containing protein, at 1,820,157 to 1,821,626
_RS08215
QEN71_RS08220: QEN71_RS08220 - LuxR C-terminal-related transcriptional regulator, at 1,821,646 to 1,824,348
_RS08220
Position (kb)
1820
1821
1822 Strain fitness (log2 ratio)
-1
0
1 at 1819.175 kb on - strand at 1819.206 kb on - strand at 1819.240 kb on - strand at 1819.334 kb on + strand at 1819.351 kb on - strand at 1819.599 kb on + strand, within QEN71_RS08210 at 1819.599 kb on + strand, within QEN71_RS08210 at 1819.600 kb on - strand, within QEN71_RS08210 at 1819.600 kb on - strand, within QEN71_RS08210 at 1819.974 kb on - strand, within QEN71_RS08210 at 1819.974 kb on - strand, within QEN71_RS08210 at 1819.974 kb on - strand, within QEN71_RS08210 at 1819.974 kb on - strand, within QEN71_RS08210 at 1820.304 kb on + strand, within QEN71_RS08215 at 1820.304 kb on + strand, within QEN71_RS08215 at 1820.305 kb on - strand, within QEN71_RS08215 at 1820.460 kb on + strand, within QEN71_RS08215 at 1820.460 kb on + strand, within QEN71_RS08215 at 1820.461 kb on - strand, within QEN71_RS08215 at 1820.463 kb on - strand, within QEN71_RS08215 at 1820.640 kb on + strand, within QEN71_RS08215 at 1820.640 kb on + strand, within QEN71_RS08215 at 1820.641 kb on - strand, within QEN71_RS08215 at 1820.661 kb on + strand, within QEN71_RS08215 at 1820.661 kb on + strand, within QEN71_RS08215 at 1820.661 kb on + strand, within QEN71_RS08215 at 1820.662 kb on - strand, within QEN71_RS08215 at 1820.729 kb on + strand, within QEN71_RS08215 at 1820.729 kb on + strand, within QEN71_RS08215 at 1820.730 kb on - strand, within QEN71_RS08215 at 1821.189 kb on + strand, within QEN71_RS08215 at 1821.252 kb on + strand, within QEN71_RS08215 at 1821.252 kb on + strand, within QEN71_RS08215 at 1821.255 kb on + strand, within QEN71_RS08215 at 1821.255 kb on + strand, within QEN71_RS08215 at 1821.429 kb on - strand, within QEN71_RS08215 at 1821.444 kb on + strand, within QEN71_RS08215 at 1821.444 kb on + strand, within QEN71_RS08215 at 1821.445 kb on - strand, within QEN71_RS08215 at 1821.445 kb on - strand, within QEN71_RS08215 at 1821.471 kb on + strand, within QEN71_RS08215 at 1821.472 kb on - strand, within QEN71_RS08215 at 1821.610 kb on + strand at 1821.647 kb on + strand at 1821.647 kb on + strand at 1821.647 kb on + strand at 1821.721 kb on - strand at 1821.932 kb on + strand, within QEN71_RS08220 at 1822.018 kb on - strand, within QEN71_RS08220 at 1822.589 kb on + strand, within QEN71_RS08220
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose (C) remove 1,819,175 - +0.8 1,819,206 - -0.2 1,819,240 - -0.6 1,819,334 + -0.3 1,819,351 - -0.2 1,819,599 + QEN71_RS08210 0.34 -0.5 1,819,599 + QEN71_RS08210 0.34 -0.1 1,819,600 - QEN71_RS08210 0.34 -0.7 1,819,600 - QEN71_RS08210 0.34 -0.7 1,819,974 - QEN71_RS08210 0.82 +0.6 1,819,974 - QEN71_RS08210 0.82 -0.7 1,819,974 - QEN71_RS08210 0.82 -0.5 1,819,974 - QEN71_RS08210 0.82 -0.5 1,820,304 + QEN71_RS08215 0.10 -0.1 1,820,304 + QEN71_RS08215 0.10 -1.2 1,820,305 - QEN71_RS08215 0.10 -0.2 1,820,460 + QEN71_RS08215 0.21 +0.4 1,820,460 + QEN71_RS08215 0.21 -1.1 1,820,461 - QEN71_RS08215 0.21 +0.1 1,820,463 - QEN71_RS08215 0.21 +1.0 1,820,640 + QEN71_RS08215 0.33 +0.2 1,820,640 + QEN71_RS08215 0.33 -0.3 1,820,641 - QEN71_RS08215 0.33 +0.1 1,820,661 + QEN71_RS08215 0.34 -0.7 1,820,661 + QEN71_RS08215 0.34 -0.2 1,820,661 + QEN71_RS08215 0.34 -0.3 1,820,662 - QEN71_RS08215 0.34 +0.4 1,820,729 + QEN71_RS08215 0.39 +0.0 1,820,729 + QEN71_RS08215 0.39 -0.6 1,820,730 - QEN71_RS08215 0.39 +0.1 1,821,189 + QEN71_RS08215 0.70 -0.6 1,821,252 + QEN71_RS08215 0.74 +1.5 1,821,252 + QEN71_RS08215 0.74 -0.3 1,821,255 + QEN71_RS08215 0.75 +0.0 1,821,255 + QEN71_RS08215 0.75 +0.5 1,821,429 - QEN71_RS08215 0.87 -0.8 1,821,444 + QEN71_RS08215 0.88 +0.4 1,821,444 + QEN71_RS08215 0.88 -0.2 1,821,445 - QEN71_RS08215 0.88 +0.7 1,821,445 - QEN71_RS08215 0.88 +0.7 1,821,471 + QEN71_RS08215 0.89 +0.4 1,821,472 - QEN71_RS08215 0.89 +0.3 1,821,610 + +0.1 1,821,647 + -1.7 1,821,647 + -0.9 1,821,647 + +0.7 1,821,721 - +1.3 1,821,932 + QEN71_RS08220 0.11 -1.1 1,822,018 - QEN71_RS08220 0.14 -1.1 1,822,589 + QEN71_RS08220 0.35 -0.2
Or see this region's nucleotide sequence