Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS15315

Experiment: planktonic; Day2; NLDM; Aluminum chloride 1mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	planktonic; Day2; NLDM; Aluminum chloride 1mM
3,342,001	-		LRK53_RS15310	0.69	-0.1
3,342,001	-		LRK53_RS15310	0.69	-2.9
3,342,001	-		LRK53_RS15310	0.69	+1.1
3,342,001	-		LRK53_RS15310	0.69	+0.7
3,342,001	-		LRK53_RS15310	0.69	-1.2
3,342,001	-		LRK53_RS15310	0.69	-2.2
3,342,228	+		LRK53_RS15310	0.77	-1.0
3,342,228	+		LRK53_RS15310	0.77	+0.1
3,342,228	+		LRK53_RS15310	0.77	-2.1
3,342,228	+		LRK53_RS15310	0.77	-0.7
3,342,228	+		LRK53_RS15310	0.77	-0.6
3,342,228	+		LRK53_RS15310	0.77	+0.1
3,342,228	+		LRK53_RS15310	0.77	+0.1
3,342,228	+		LRK53_RS15310	0.77	-1.0
3,342,228	+		LRK53_RS15310	0.77	-0.3
3,342,228	+		LRK53_RS15310	0.77	+0.9
3,342,229	-		LRK53_RS15310	0.77	-0.8
3,342,229	-		LRK53_RS15310	0.77	-1.4
3,342,229	-		LRK53_RS15310	0.77	+0.2
3,342,229	-		LRK53_RS15310	0.77	-1.5
3,342,229	-		LRK53_RS15310	0.77	+0.1
3,342,229	-		LRK53_RS15310	0.77	-0.4
3,342,229	-		LRK53_RS15310	0.77	-0.1
3,342,229	-		LRK53_RS15310	0.77	-0.6
3,342,229	-		LRK53_RS15310	0.77	+1.0
3,342,229	-		LRK53_RS15310	0.77	+0.8
3,342,229	-		LRK53_RS15310	0.77	+0.1
3,342,229	-		LRK53_RS15310	0.77	+0.2
3,342,229	-		LRK53_RS15310	0.77	+0.4
3,342,229	-		LRK53_RS15310	0.77	-0.9
3,342,246	+		LRK53_RS15310	0.78	-0.9
3,342,246	+		LRK53_RS15310	0.78	-1.7
3,342,246	+		LRK53_RS15310	0.78	-1.9
3,342,246	+		LRK53_RS15310	0.78	-1.1
3,342,247	-		LRK53_RS15310	0.78	+0.2
3,342,247	-		LRK53_RS15310	0.78	+0.7
3,342,247	-		LRK53_RS15310	0.78	-0.3
3,342,267	+		LRK53_RS15310	0.78	+0.3
3,342,268	-		LRK53_RS15310	0.79	-1.8
3,342,268	-		LRK53_RS15310	0.79	-1.1
3,342,361	+		LRK53_RS15310	0.82	-0.3
3,342,361	+		LRK53_RS15310	0.82	+0.4
3,342,361	+		LRK53_RS15310	0.82	+0.7
3,342,362	-		LRK53_RS15310	0.82	-2.1
3,342,362	-		LRK53_RS15310	0.82	-0.5
3,342,419	+		LRK53_RS15310	0.84	-1.6
3,342,420	-		LRK53_RS15310	0.84	-1.5
3,342,420	-		LRK53_RS15310	0.84	-1.7
3,342,420	-		LRK53_RS15310	0.84	-0.5
3,342,420	-		LRK53_RS15310	0.84	+0.2
3,342,420	-		LRK53_RS15310	0.84	-0.6
3,342,423	+		LRK53_RS15310	0.84	-0.8
3,342,423	+		LRK53_RS15310	0.84	-0.8
3,342,423	+		LRK53_RS15310	0.84	+0.1
3,342,423	+		LRK53_RS15310	0.84	+0.2
3,342,423	+		LRK53_RS15310	0.84	+1.3
3,342,423	+		LRK53_RS15310	0.84	+0.1
3,342,423	+		LRK53_RS15310	0.84	-0.4
3,342,423	+		LRK53_RS15310	0.84	-0.5
3,342,423	+		LRK53_RS15310	0.84	+0.4
3,342,423	+		LRK53_RS15310	0.84	-0.1
3,342,424	-		LRK53_RS15310	0.84	-0.1
3,342,424	-		LRK53_RS15310	0.84	+0.0
3,342,424	-		LRK53_RS15310	0.84	+1.1
3,342,424	-		LRK53_RS15310	0.84	-0.4
3,342,424	-		LRK53_RS15310	0.84	-1.4
3,342,424	-		LRK53_RS15310	0.84	-0.6
3,342,424	-		LRK53_RS15310	0.84	+2.1
3,342,424	-		LRK53_RS15310	0.84	-0.8
3,342,424	-		LRK53_RS15310	0.84	-0.1
3,342,424	-		LRK53_RS15310	0.84	-0.1
3,342,424	-		LRK53_RS15310	0.84	-0.1
3,342,424	-		LRK53_RS15310	0.84	-0.7
3,342,424	-		LRK53_RS15310	0.84	-0.1
3,342,424	-		LRK53_RS15310	0.84	+0.2
3,342,424	-		LRK53_RS15310	0.84	+0.2
3,342,424	-		LRK53_RS15310	0.84	+0.7
3,342,424	-		LRK53_RS15310	0.84	-0.6
3,342,424	-		LRK53_RS15310	0.84	-1.8
3,342,424	-		LRK53_RS15310	0.84	+0.3
3,342,424	-		LRK53_RS15310	0.84	-0.6
3,342,424	-		LRK53_RS15310	0.84	-1.7
3,342,426	+		LRK53_RS15310	0.84	-0.4
3,342,426	+		LRK53_RS15310	0.84	-0.8
3,342,426	+		LRK53_RS15310	0.84	+0.2
3,342,426	+		LRK53_RS15310	0.84	-1.1
3,342,426	+		LRK53_RS15310	0.84	-0.8
3,342,426	+		LRK53_RS15310	0.84	+0.1
3,342,426	+		LRK53_RS15310	0.84	+0.0
3,342,427	-		LRK53_RS15310	0.84	-1.6
3,342,427	-		LRK53_RS15310	0.84	-1.1
3,342,465	+		LRK53_RS15310	0.86	+0.8
3,342,465	+		LRK53_RS15310	0.86	-1.4
3,342,466	-		LRK53_RS15310	0.86	-0.3
3,342,475	+		LRK53_RS15310	0.86	-3.4
3,342,475	+		LRK53_RS15310	0.86	+0.9
3,342,475	+		LRK53_RS15310	0.86	-0.7
3,342,475	+		LRK53_RS15310	0.86	-0.7
3,342,475	+		LRK53_RS15310	0.86	-1.4
3,342,476	-		LRK53_RS15310	0.86	-1.0
3,342,476	-		LRK53_RS15310	0.86	-1.4
3,342,476	-		LRK53_RS15310	0.86	-1.3
3,342,486	+		LRK53_RS15310	0.86	-1.5
3,342,486	+		LRK53_RS15310	0.86	-1.1
3,342,486	+		LRK53_RS15310	0.86	-0.3
3,342,486	+		LRK53_RS15310	0.86	-1.0
3,342,486	+		LRK53_RS15310	0.86	-0.5
3,342,486	+		LRK53_RS15310	0.86	-0.3
3,342,487	-		LRK53_RS15310	0.86	-1.4
3,342,487	-		LRK53_RS15310	0.86	+0.4
3,342,487	-		LRK53_RS15310	0.86	+1.1
3,342,487	-		LRK53_RS15310	0.86	-1.2
3,342,499	+		LRK53_RS15310	0.87	+0.9
3,342,499	+		LRK53_RS15310	0.87	-0.9
3,342,499	+		LRK53_RS15310	0.87	-0.5
3,342,500	-		LRK53_RS15310	0.87	-1.5
3,342,500	-		LRK53_RS15310	0.87	+0.4
3,342,500	-		LRK53_RS15310	0.87	+0.9
3,342,500	-		LRK53_RS15310	0.87	-0.7
3,342,500	-		LRK53_RS15310	0.87	-0.0
3,342,500	-		LRK53_RS15310	0.87	+1.3
3,342,500	-		LRK53_RS15310	0.87	-0.5
3,342,528	+		LRK53_RS15310	0.88	+0.2
3,342,528	+		LRK53_RS15310	0.88	+1.9
3,342,528	+		LRK53_RS15310	0.88	-0.7
3,342,528	+		LRK53_RS15310	0.88	-0.3
3,342,529	-		LRK53_RS15310	0.88	-3.0
3,342,576	+		LRK53_RS15310	0.90	+0.9
3,342,576	+		LRK53_RS15310	0.90	-0.7
3,342,577	-		LRK53_RS15310	0.90	-0.1
3,342,577	-		LRK53_RS15310	0.90	-0.3
3,342,615	+				-0.8
3,342,615	+				+0.7
3,342,615	+				-1.0
3,342,615	+				-0.1
3,342,615	+				-1.9
3,342,615	+				-0.9
3,342,615	+				+1.7
3,342,615	+				-0.0
3,342,615	+				-0.9
3,342,615	+				+0.0
3,342,615	+				-0.4
3,342,615	+				-0.8
3,342,615	+				+0.1
3,342,615	+				-1.8
3,342,616	-				-0.4
3,342,616	-				-1.6
3,342,616	-				-0.3
3,342,616	-				-0.6
3,342,616	-				-0.4
3,342,616	-				-0.6
3,342,616	-				-1.6
3,342,616	-				-0.8
3,342,616	-				+0.5
3,342,616	-				+0.5
3,342,616	-				-0.1
3,342,711	+				-0.6
3,342,711	+				-0.2
3,342,711	+				+0.8
3,342,712	-				-0.1
3,342,712	-				-1.2
3,342,712	-				-0.2
3,342,712	-				+0.5
3,342,828	+				-0.9
3,342,828	+				-1.4
3,342,828	+				+0.1
3,342,828	+				-1.6
3,342,829	-				+0.8
3,342,829	-				+1.3
3,342,858	+				-0.8
3,342,858	+				-2.2
3,342,858	+				+1.0
3,342,858	+				-0.2
3,342,858	+				-0.5
3,342,859	-				-0.2
3,342,859	-				-2.3
3,342,859	-				-0.1
3,342,859	-				-1.3
3,342,859	-				-2.0
3,342,891	+				-0.4
3,342,959	-		LRK53_RS15315	0.34	-1.0
3,342,999	+		LRK53_RS15315	0.53	-0.4
3,342,999	+		LRK53_RS15315	0.53	-1.2
3,342,999	+		LRK53_RS15315	0.53	-1.2
3,342,999	+		LRK53_RS15315	0.53	-0.5
3,342,999	+		LRK53_RS15315	0.53	-1.5
3,342,999	+		LRK53_RS15315	0.53	-2.1
3,342,999	+		LRK53_RS15315	0.53	-1.1
3,342,999	+		LRK53_RS15315	0.53	-2.3
3,343,000	-		LRK53_RS15315	0.54	-1.7
3,343,000	-		LRK53_RS15315	0.54	-0.1
3,343,000	-		LRK53_RS15315	0.54	+0.3
3,343,000	-		LRK53_RS15315	0.54	-1.0
3,343,000	-		LRK53_RS15315	0.54	-2.2
3,343,000	-		LRK53_RS15315	0.54	-0.8
3,343,000	-		LRK53_RS15315	0.54	-0.9
3,343,000	-		LRK53_RS15315	0.54	-2.3
3,343,000	-		LRK53_RS15315	0.54	-0.2
3,343,317	+		LRK53_RS15320	0.34	-0.9
3,343,317	+		LRK53_RS15320	0.34	-1.0
3,343,317	+		LRK53_RS15320	0.34	-0.4
3,343,317	+		LRK53_RS15320	0.34	-0.8
3,343,318	-		LRK53_RS15320	0.34	+0.9
3,343,318	-		LRK53_RS15320	0.34	-1.3
3,343,318	-		LRK53_RS15320	0.34	-0.5
3,343,341	+		LRK53_RS15320	0.37	-1.6
3,343,341	+		LRK53_RS15320	0.37	-0.7
3,343,489	+		LRK53_RS15320	0.59	-0.8
3,343,489	+		LRK53_RS15320	0.59	+2.0
3,343,489	+		LRK53_RS15320	0.59	-1.2
3,343,489	+		LRK53_RS15320	0.59	-0.5
3,343,489	+		LRK53_RS15320	0.59	+0.6
3,343,489	+		LRK53_RS15320	0.59	+0.0
3,343,489	+		LRK53_RS15320	0.59	-0.5
3,343,490	-		LRK53_RS15320	0.59	-0.8
3,343,547	+		LRK53_RS15320	0.67	-0.5
3,343,547	+		LRK53_RS15320	0.67	-0.3
3,343,547	+		LRK53_RS15320	0.67	+0.5
3,343,547	+		LRK53_RS15320	0.67	-0.3
3,343,547	+		LRK53_RS15320	0.67	-0.5
3,343,547	+		LRK53_RS15320	0.67	+2.7
3,343,547	+		LRK53_RS15320	0.67	-0.5
3,343,547	+		LRK53_RS15320	0.67	-0.7
3,343,547	+		LRK53_RS15320	0.67	+0.4
3,343,547	+		LRK53_RS15320	0.67	-2.0
3,343,547	+		LRK53_RS15320	0.67	-0.8
3,343,547	+		LRK53_RS15320	0.67	-1.0
3,343,547	+		LRK53_RS15320	0.67	-0.9
3,343,547	+		LRK53_RS15320	0.67	-1.3
3,343,547	+		LRK53_RS15320	0.67	-1.5
3,343,547	+		LRK53_RS15320	0.67	-1.0
3,343,547	+		LRK53_RS15320	0.67	+0.9
3,343,547	+		LRK53_RS15320	0.67	-2.6
3,343,547	+		LRK53_RS15320	0.67	+0.9
3,343,547	+		LRK53_RS15320	0.67	+0.1
3,343,548	-		LRK53_RS15320	0.67	-2.4
3,343,548	-		LRK53_RS15320	0.67	+0.0
3,343,548	-		LRK53_RS15320	0.67	+1.5
3,343,548	-		LRK53_RS15320	0.67	-0.0
3,343,548	-		LRK53_RS15320	0.67	-0.3
3,343,548	-		LRK53_RS15320	0.67	-0.9
3,343,548	-		LRK53_RS15320	0.67	+0.6
3,343,548	-		LRK53_RS15320	0.67	-0.1
3,343,548	-		LRK53_RS15320	0.67	-0.3
3,343,548	-		LRK53_RS15320	0.67	-0.6
3,343,548	-		LRK53_RS15320	0.67	-2.8
3,343,548	-		LRK53_RS15320	0.67	+0.8
3,343,548	-		LRK53_RS15320	0.67	+0.1
3,343,548	-		LRK53_RS15320	0.67	+0.8
3,343,548	-		LRK53_RS15320	0.67	+1.1
3,343,548	-		LRK53_RS15320	0.67	-0.8
3,343,548	-		LRK53_RS15320	0.67	-0.6
3,343,548	-		LRK53_RS15320	0.67	+0.6
3,343,548	-		LRK53_RS15320	0.67	+0.1
3,343,548	-		LRK53_RS15320	0.67	+0.2
3,343,548	-		LRK53_RS15320	0.67	-1.1
3,343,548	-		LRK53_RS15320	0.67	+1.7
3,343,548	-		LRK53_RS15320	0.67	+0.5
3,343,548	-		LRK53_RS15320	0.67	-0.1
3,343,548	-		LRK53_RS15320	0.67	+0.1
3,343,548	-		LRK53_RS15320	0.67	-0.6
3,343,548	-		LRK53_RS15320	0.67	-0.3
3,343,548	-		LRK53_RS15320	0.67	-1.1
3,343,548	-		LRK53_RS15320	0.67	+0.2
3,343,548	-		LRK53_RS15320	0.67	+1.4
3,343,548	-		LRK53_RS15320	0.67	-1.0
3,343,548	-		LRK53_RS15320	0.67	-1.0
3,343,548	-		LRK53_RS15320	0.67	-0.7
3,343,548	-		LRK53_RS15320	0.67	-0.8
3,343,548	-		LRK53_RS15320	0.67	-0.3
3,343,548	-		LRK53_RS15320	0.67	+1.2
3,343,548	-		LRK53_RS15320	0.67	+1.0
3,343,548	-		LRK53_RS15320	0.67	-0.0
3,343,548	-		LRK53_RS15320	0.67	-0.3
3,343,548	-		LRK53_RS15320	0.67	-1.6
3,343,585	+		LRK53_RS15320	0.73	+0.5
3,343,591	+		LRK53_RS15320	0.74	-1.2
3,343,591	+		LRK53_RS15320	0.74	+0.4
3,343,592	-		LRK53_RS15320	0.74	+0.8
3,343,592	-		LRK53_RS15320	0.74	+1.2
3,343,592	-		LRK53_RS15320	0.74	-0.0
3,343,592	-		LRK53_RS15320	0.74	+0.1
3,343,683	+		LRK53_RS15320	0.87	-1.8
3,343,683	+		LRK53_RS15320	0.87	-1.3
3,343,708	+				-1.2
3,343,709	-				-0.1
3,343,882	+				-0.4
3,343,882	+				-1.9
3,343,882	+				-1.1
3,343,883	-				-0.6
3,343,883	-				-1.2
3,343,883	-				-0.5
3,343,997	-				+0.5
3,343,997	-				-0.3
3,344,088	+				+0.5
3,344,088	+				+1.3
3,344,088	+				-1.6
3,344,088	+				+0.0
3,344,088	+				-1.0
3,344,089	-				-0.9
3,344,089	-				-2.3
3,344,089	-				+0.8
3,344,089	-				-0.1
3,344,089	-				-1.1
3,344,089	-				-0.5
3,344,089	-				+0.1
3,344,089	-				-0.1
3,344,089	-				-2.1