Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS04540

Experiment: planktonic; Day2; NLDM; Aluminum chloride 1mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	planktonic; Day2; NLDM; Aluminum chloride 1mM
1,055,252	+		LRK53_RS04535	0.49	+1.0
1,055,252	+		LRK53_RS04535	0.49	-0.2
1,055,252	+		LRK53_RS04535	0.49	-2.0
1,055,252	+		LRK53_RS04535	0.49	+0.2
1,055,252	+		LRK53_RS04535	0.49	-1.2
1,055,252	+		LRK53_RS04535	0.49	-1.6
1,055,252	+		LRK53_RS04535	0.49	-0.7
1,055,252	+		LRK53_RS04535	0.49	-0.5
1,055,252	+		LRK53_RS04535	0.49	-1.1
1,055,252	+		LRK53_RS04535	0.49	-0.8
1,055,252	+		LRK53_RS04535	0.49	+1.3
1,055,252	+		LRK53_RS04535	0.49	-1.1
1,055,253	-		LRK53_RS04535	0.49	+0.6
1,055,253	-		LRK53_RS04535	0.49	-1.7
1,055,253	-		LRK53_RS04535	0.49	-0.6
1,055,253	-		LRK53_RS04535	0.49	-1.4
1,055,253	-		LRK53_RS04535	0.49	+0.2
1,055,253	-		LRK53_RS04535	0.49	+0.3
1,055,253	-		LRK53_RS04535	0.49	-2.8
1,055,253	-		LRK53_RS04535	0.49	-1.5
1,055,253	-		LRK53_RS04535	0.49	-0.2
1,055,253	-		LRK53_RS04535	0.49	+0.5
1,055,300	+		LRK53_RS04535	0.53	-0.6
1,055,301	-		LRK53_RS04535	0.53	-1.6
1,055,301	-		LRK53_RS04535	0.53	+0.2
1,055,318	+		LRK53_RS04535	0.54	-0.2
1,055,318	+		LRK53_RS04535	0.54	-0.2
1,055,318	+		LRK53_RS04535	0.54	-0.2
1,055,319	-		LRK53_RS04535	0.54	+0.5
1,055,319	-		LRK53_RS04535	0.54	-1.5
1,055,319	-		LRK53_RS04535	0.54	+0.1
1,055,319	-		LRK53_RS04535	0.54	+1.4
1,055,363	+		LRK53_RS04535	0.58	-1.5
1,055,363	+		LRK53_RS04535	0.58	-0.0
1,055,363	+		LRK53_RS04535	0.58	-0.6
1,055,363	+		LRK53_RS04535	0.58	+0.1
1,055,363	+		LRK53_RS04535	0.58	-0.9
1,055,363	+		LRK53_RS04535	0.58	-0.4
1,055,364	-		LRK53_RS04535	0.58	-0.6
1,055,364	-		LRK53_RS04535	0.58	+2.4
1,055,364	-		LRK53_RS04535	0.58	-1.7
1,055,364	-		LRK53_RS04535	0.58	-0.9
1,055,364	-		LRK53_RS04535	0.58	-2.4
1,055,541	-		LRK53_RS04535	0.72	+1.0
1,055,624	+		LRK53_RS04535	0.79	-0.0
1,055,624	+		LRK53_RS04535	0.79	-0.0
1,055,624	+		LRK53_RS04535	0.79	-1.8
1,055,624	+		LRK53_RS04535	0.79	-0.5
1,055,625	-		LRK53_RS04535	0.79	-1.1
1,055,625	-		LRK53_RS04535	0.79	+0.3
1,055,625	-		LRK53_RS04535	0.79	+0.4
1,055,625	-		LRK53_RS04535	0.79	-1.5
1,055,625	-		LRK53_RS04535	0.79	-0.7
1,055,651	+		LRK53_RS04535	0.81	-0.9
1,055,651	+		LRK53_RS04535	0.81	-1.3
1,055,652	-		LRK53_RS04535	0.81	-2.1
1,055,652	-		LRK53_RS04535	0.81	+1.4
1,055,652	-		LRK53_RS04535	0.81	-0.4
1,055,652	-		LRK53_RS04535	0.81	-1.5
1,055,652	-		LRK53_RS04535	0.81	-0.5
1,055,652	-		LRK53_RS04535	0.81	-1.2
1,055,652	-		LRK53_RS04535	0.81	-0.6
1,055,652	-		LRK53_RS04535	0.81	-0.9
1,055,863	+				+0.2
1,055,864	-				+0.1
1,055,864	-				+0.8
1,055,949	+				-0.3
1,055,949	+				-0.8
1,055,949	+				-0.6
1,055,949	+				-1.0
1,055,949	+				-1.2
1,055,949	+				-0.1
1,055,949	+				+0.7
1,055,949	+				-0.4
1,055,949	+				-1.5
1,055,949	+				+1.4
1,055,949	+				+0.2
1,055,949	+				-1.8
1,055,949	+				-0.8
1,055,949	+				+0.7
1,055,949	+				-2.4
1,055,949	+				-0.3
1,055,949	+				-2.3
1,055,949	+				-1.9
1,055,949	+				-1.3
1,055,949	+				-1.0
1,055,950	-				-0.3
1,055,950	-				+0.2
1,055,950	-				-2.0
1,055,950	-				-0.6
1,055,950	-				-0.1
1,055,950	-				-0.9
1,055,950	-				+0.3
1,055,950	-				-0.1
1,055,950	-				+0.9
1,055,950	-				-1.7
1,055,950	-				-2.0
1,055,950	-				-2.2
1,055,950	-				-1.6
1,055,950	-				-0.8
1,055,950	-				+0.2
1,055,950	-				+1.4
1,055,950	-				-0.3
1,056,198	+		LRK53_RS04540	0.61	+1.2
1,056,199	-		LRK53_RS04540	0.61	-2.0
1,056,199	-		LRK53_RS04540	0.61	-2.1
1,056,199	-		LRK53_RS04540	0.61	-0.4
1,056,318	+		LRK53_RS04540	0.89	+0.1
1,056,318	+		LRK53_RS04540	0.89	-2.8
1,056,318	+		LRK53_RS04540	0.89	-0.2
1,056,318	+		LRK53_RS04540	0.89	-2.3
1,056,319	-		LRK53_RS04540	0.89	-0.4
1,056,319	-		LRK53_RS04540	0.89	-3.4
1,056,319	-		LRK53_RS04540	0.89	-0.3
1,056,319	-		LRK53_RS04540	0.89	-1.0
1,056,319	-		LRK53_RS04540	0.89	-1.7
1,056,409	+				-0.3
1,056,410	-				-0.4
1,056,410	-				-0.6
1,056,410	-				-1.3
1,056,433	+				-1.5
1,056,433	+				-1.6
1,056,434	-				-1.6
1,056,500	+				-1.6
1,056,500	+				+0.0
1,056,500	+				-1.2
1,056,500	+				-0.9
1,056,500	+				-0.9
1,056,500	+				-0.5
1,056,500	+				-1.1
1,056,500	+				-1.2
1,056,500	+				-0.7
1,056,501	-				-0.9
1,056,501	-				-0.3
1,056,501	-				-0.4
1,056,501	-				+0.3
1,056,501	-				-1.0
1,056,501	-				-0.6
1,056,527	+				-0.2
1,056,527	+				-1.3
1,056,527	+				-1.8
1,056,527	+				-0.0
1,056,527	+				+1.5
1,056,527	+				+0.6
1,056,528	-				+0.5
1,056,528	-				-1.0
1,056,542	+				-2.2
1,056,543	-				+0.1
1,056,543	-				+0.4
1,056,543	-				+2.1
1,056,543	-				-0.4
1,056,543	-				-0.3
1,056,635	+		LRK53_RS04545	0.19	-0.9
1,056,636	-		LRK53_RS04545	0.19	-2.2
1,056,636	-		LRK53_RS04545	0.19	-1.9
1,056,776	+		LRK53_RS04545	0.34	-1.4
1,056,776	+		LRK53_RS04545	0.34	-0.5
1,056,776	+		LRK53_RS04545	0.34	+0.1
1,056,776	+		LRK53_RS04545	0.34	-1.2
1,056,776	+		LRK53_RS04545	0.34	-1.0
1,056,776	+		LRK53_RS04545	0.34	-0.4
1,056,777	-		LRK53_RS04545	0.34	-1.8
1,056,777	-		LRK53_RS04545	0.34	-1.4
1,056,777	-		LRK53_RS04545	0.34	-1.5
1,056,777	-		LRK53_RS04545	0.34	-0.9
1,056,777	-		LRK53_RS04545	0.34	-1.3
1,056,777	-		LRK53_RS04545	0.34	-0.5
1,056,818	+		LRK53_RS04545	0.38	-0.3
1,056,819	-		LRK53_RS04545	0.38	+1.1
1,056,819	-		LRK53_RS04545	0.38	-2.7
1,056,819	-		LRK53_RS04545	0.38	+1.5
1,056,984	-		LRK53_RS04545	0.56	-0.7
1,056,984	-		LRK53_RS04545	0.56	+0.2
1,057,046	+		LRK53_RS04545	0.62	-1.0
1,057,046	+		LRK53_RS04545	0.62	-2.6
1,057,046	+		LRK53_RS04545	0.62	-1.3
1,057,047	-		LRK53_RS04545	0.63	-0.8
1,057,047	-		LRK53_RS04545	0.63	-1.1
1,057,047	-		LRK53_RS04545	0.63	-1.1
1,057,058	+		LRK53_RS04545	0.64	+0.2
1,057,147	+		LRK53_RS04545	0.73	+0.3
1,057,147	+		LRK53_RS04545	0.73	-0.2
1,057,147	+		LRK53_RS04545	0.73	-2.0
1,057,191	+		LRK53_RS04545	0.78	-2.3
1,057,191	+		LRK53_RS04545	0.78	+0.2
1,057,283	+		LRK53_RS04545	0.88	-0.7
1,057,283	+		LRK53_RS04545	0.88	-1.3
1,057,283	+		LRK53_RS04545	0.88	-1.0
1,057,283	+		LRK53_RS04545	0.88	+0.3
1,057,283	+		LRK53_RS04545	0.88	-1.3
1,057,283	+		LRK53_RS04545	0.88	-1.9
1,057,283	+		LRK53_RS04545	0.88	-1.0
1,057,283	+		LRK53_RS04545	0.88	-0.8
1,057,283	+		LRK53_RS04545	0.88	+1.3
1,057,283	+		LRK53_RS04545	0.88	-1.0
1,057,284	-		LRK53_RS04545	0.88	-1.3
1,057,284	-		LRK53_RS04545	0.88	+2.4
1,057,284	-		LRK53_RS04545	0.88	+0.9
1,057,284	-		LRK53_RS04545	0.88	-0.5
1,057,284	-		LRK53_RS04545	0.88	-2.0
1,057,284	-		LRK53_RS04545	0.88	-1.0
1,057,284	-		LRK53_RS04545	0.88	-1.4