Strain Fitness in Paraburkholderia sabiae LMG 24235 around QEN71_RS23005

Experiment: Fumaric (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fumaric (C)
5,112,237	+				-0.5
5,112,238	-				-1.0
5,112,238	-				-0.2
5,112,263	+				-0.3
5,112,264	-				-0.1
5,112,302	-				+1.1
5,112,338	-				+0.2
5,112,338	-				-0.4
5,112,431	-		QEN71_RS23000	0.12	+1.3
5,112,454	+		QEN71_RS23000	0.15	-0.9
5,112,454	+		QEN71_RS23000	0.15	+1.3
5,112,455	-		QEN71_RS23000	0.15	+1.0
5,112,455	-		QEN71_RS23000	0.15	+0.1
5,112,512	+		QEN71_RS23000	0.22	-0.7
5,112,513	-		QEN71_RS23000	0.22	-0.1
5,112,523	+		QEN71_RS23000	0.24	-0.2
5,112,523	+		QEN71_RS23000	0.24	-0.1
5,112,524	-		QEN71_RS23000	0.24	+0.7
5,112,524	-		QEN71_RS23000	0.24	+0.3
5,112,524	-		QEN71_RS23000	0.24	-0.7
5,112,557	-		QEN71_RS23000	0.28	-1.5
5,112,614	+		QEN71_RS23000	0.35	-0.6
5,112,614	+		QEN71_RS23000	0.35	-0.2
5,112,614	+		QEN71_RS23000	0.35	-0.7
5,112,614	+		QEN71_RS23000	0.35	-0.9
5,112,614	+		QEN71_RS23000	0.35	-1.3
5,112,614	+		QEN71_RS23000	0.35	-0.9
5,112,615	-		QEN71_RS23000	0.35	-0.9
5,112,615	-		QEN71_RS23000	0.35	-1.6
5,112,615	-		QEN71_RS23000	0.35	-0.5
5,112,615	-		QEN71_RS23000	0.35	-0.3
5,112,615	-		QEN71_RS23000	0.35	+0.6
5,112,617	-		QEN71_RS23000	0.35	+0.1
5,112,622	+		QEN71_RS23000	0.36	+0.4
5,112,622	+		QEN71_RS23000	0.36	+0.9
5,112,622	+		QEN71_RS23000	0.36	-0.9
5,112,622	+		QEN71_RS23000	0.36	-0.4
5,112,623	-		QEN71_RS23000	0.36	+0.3
5,112,623	-		QEN71_RS23000	0.36	-1.9
5,112,734	+		QEN71_RS23000	0.50	-0.1
5,112,734	+		QEN71_RS23000	0.50	-1.1
5,112,734	+		QEN71_RS23000	0.50	-0.5
5,112,735	-		QEN71_RS23000	0.50	-0.0
5,112,736	+		QEN71_RS23000	0.50	-1.8
5,112,736	+		QEN71_RS23000	0.50	+0.1
5,112,736	+		QEN71_RS23000	0.50	-1.1
5,112,737	-		QEN71_RS23000	0.50	-0.4
5,112,737	-		QEN71_RS23000	0.50	-0.9
5,112,737	-		QEN71_RS23000	0.50	+0.3
5,112,745	+		QEN71_RS23000	0.51	-0.6
5,112,746	-		QEN71_RS23000	0.52	-0.5
5,113,230	+		QEN71_RS23005	0.13	-0.5
5,113,230	+		QEN71_RS23005	0.13	+0.4
5,113,230	+		QEN71_RS23005	0.13	+0.1
5,113,231	-		QEN71_RS23005	0.13	+0.5
5,113,231	-		QEN71_RS23005	0.13	-0.2
5,113,304	+		QEN71_RS23005	0.27	-0.1
5,113,304	+		QEN71_RS23005	0.27	+1.0
5,113,304	+		QEN71_RS23005	0.27	+0.6
5,113,304	+		QEN71_RS23005	0.27	+0.7
5,113,304	+		QEN71_RS23005	0.27	+1.0
5,113,304	+		QEN71_RS23005	0.27	+0.2
5,113,305	-		QEN71_RS23005	0.28	+0.1
5,113,305	-		QEN71_RS23005	0.28	-2.1
5,113,326	+		QEN71_RS23005	0.32	+0.5
5,113,326	+		QEN71_RS23005	0.32	-0.9
5,113,326	+		QEN71_RS23005	0.32	+0.8
5,113,327	-		QEN71_RS23005	0.32	+0.0
5,113,327	-		QEN71_RS23005	0.32	-0.7
5,113,327	-		QEN71_RS23005	0.32	-1.4
5,113,327	-		QEN71_RS23005	0.32	-1.7
5,113,327	-		QEN71_RS23005	0.32	-1.6
5,113,327	-		QEN71_RS23005	0.32	-0.1
5,113,327	-		QEN71_RS23005	0.32	+1.4
5,113,327	-		QEN71_RS23005	0.32	+0.2
5,113,327	-		QEN71_RS23005	0.32	+0.5
5,113,364	+		QEN71_RS23005	0.39	-0.6
5,113,365	-		QEN71_RS23005	0.39	+0.7
5,113,365	-		QEN71_RS23005	0.39	+0.4
5,113,365	-		QEN71_RS23005	0.39	+0.5
5,113,490	+		QEN71_RS23005	0.63	-0.1
5,113,490	+		QEN71_RS23005	0.63	-1.4
5,113,490	+		QEN71_RS23005	0.63	+0.9
5,113,490	+		QEN71_RS23005	0.63	+1.3
5,113,490	+		QEN71_RS23005	0.63	+0.3
5,113,490	+		QEN71_RS23005	0.63	+0.9
5,113,490	+		QEN71_RS23005	0.63	-0.2
5,113,490	+		QEN71_RS23005	0.63	-0.7
5,113,490	+		QEN71_RS23005	0.63	+0.5
5,113,490	+		QEN71_RS23005	0.63	+0.1
5,113,490	+		QEN71_RS23005	0.63	-0.7
5,113,490	+		QEN71_RS23005	0.63	-0.2
5,113,490	+		QEN71_RS23005	0.63	-0.1
5,113,490	+		QEN71_RS23005	0.63	-0.4
5,113,490	+		QEN71_RS23005	0.63	-0.4
5,113,490	+		QEN71_RS23005	0.63	-0.0
5,113,490	+		QEN71_RS23005	0.63	-0.0
5,113,490	+		QEN71_RS23005	0.63	-1.4
5,113,490	+		QEN71_RS23005	0.63	+0.0
5,113,490	+		QEN71_RS23005	0.63	+0.7
5,113,490	+		QEN71_RS23005	0.63	+1.3
5,113,490	+		QEN71_RS23005	0.63	-0.6
5,113,490	+		QEN71_RS23005	0.63	-1.7
5,113,490	+		QEN71_RS23005	0.63	-0.0
5,113,490	+		QEN71_RS23005	0.63	+0.1
5,113,490	+		QEN71_RS23005	0.63	-1.1
5,113,490	+		QEN71_RS23005	0.63	-0.9
5,113,490	+		QEN71_RS23005	0.63	-0.4
5,113,490	+		QEN71_RS23005	0.63	-0.4
5,113,491	-		QEN71_RS23005	0.63	+1.4
5,113,491	-		QEN71_RS23005	0.63	+2.3
5,113,491	-		QEN71_RS23005	0.63	+0.5
5,113,491	-		QEN71_RS23005	0.63	-1.6
5,113,491	-		QEN71_RS23005	0.63	+0.3
5,113,491	-		QEN71_RS23005	0.63	-0.3
5,113,491	-		QEN71_RS23005	0.63	+0.4
5,113,491	-		QEN71_RS23005	0.63	-0.7
5,113,491	-		QEN71_RS23005	0.63	+0.4
5,113,491	-		QEN71_RS23005	0.63	-1.4
5,113,491	-		QEN71_RS23005	0.63	-0.1
5,113,491	-		QEN71_RS23005	0.63	-0.6
5,113,491	-		QEN71_RS23005	0.63	-1.4
5,113,491	-		QEN71_RS23005	0.63	-1.5
5,113,491	-		QEN71_RS23005	0.63	-0.9
5,113,491	-		QEN71_RS23005	0.63	+0.2
5,113,491	-		QEN71_RS23005	0.63	-0.5
5,113,491	-		QEN71_RS23005	0.63	-0.7
5,113,491	-		QEN71_RS23005	0.63	+0.3
5,113,491	-		QEN71_RS23005	0.63	-0.2
5,113,578	+		QEN71_RS23005	0.80	+0.8
5,113,632	-				+1.0
5,113,816	+		QEN71_RS23010	0.68	+0.5
5,113,817	-		QEN71_RS23010	0.69	-1.3
5,113,835	-		QEN71_RS23010	0.81	-1.3
5,113,865	+				-1.8
5,113,865	+				-1.1
5,113,865	+				+0.2
5,113,865	+				-0.8
5,113,865	+				-0.7
5,113,866	-				-0.2
5,113,866	-				-1.3
5,113,866	-				+0.7
5,113,866	-				-1.0
5,113,866	-				-1.3
5,114,013	+				+0.7
5,114,014	-				-0.3
5,114,014	-				+0.9
5,114,014	-				-0.7
5,114,014	-				-0.9
5,114,065	+				+0.3
5,114,065	+				-1.0
5,114,066	-				-0.1
5,114,066	-				-0.1
5,114,066	-				-0.9
5,114,087	+				+0.0
5,114,088	-				+1.5
5,114,088	-				+0.2
5,114,097	+				+0.8
5,114,097	+				-0.1
5,114,097	+				-0.2
5,114,098	-				-1.3
5,114,098	-				+0.6
5,114,098	-				+0.9
5,114,098	-				-0.1
5,114,098	-				+0.5
5,114,128	+				-0.5
5,114,128	+				+0.4
5,114,129	-				-2.0
5,114,129	-				+0.6
5,114,129	-				+0.9
5,114,129	-				+0.7
5,114,129	-				+0.6
5,114,136	-				-2.2
5,114,136	-				+0.4
5,114,192	-				+0.3
5,114,209	+				+0.1
5,114,220	+				-0.2
5,114,220	+				-1.5
5,114,221	-				+1.2
5,114,221	-				+0.2
5,114,221	-				-1.1
5,114,262	+				+0.7
5,114,262	+				+1.3
5,114,262	+				+0.9
5,114,262	+				-0.3
5,114,263	-				+0.1
5,114,263	-				+0.7
5,114,263	-				+0.2
5,114,263	-				-0.4
5,114,263	-				-0.4
5,114,263	-				+0.0
5,114,264	+				-0.2
5,114,264	+				-0.1
5,114,264	+				-0.5
5,114,264	+				+0.0
5,114,264	+				-2.5
5,114,264	+				+0.3
5,114,264	+				-0.9
5,114,264	+				-2.9
5,114,265	-				+0.5
5,114,265	-				-1.1
5,114,265	-				+0.2
5,114,265	-				-0.3
5,114,265	-				-0.6
5,114,265	-				+0.4
5,114,265	-				+0.4
5,114,325	+				-1.0
5,114,354	+				-0.4
5,114,355	-				+0.3
5,114,403	-				-0.3
5,114,403	-				+0.8
5,114,426	+		QEN71_RS23015	0.13	+0.4
5,114,426	+		QEN71_RS23015	0.13	+0.7
5,114,426	+		QEN71_RS23015	0.13	+2.0
5,114,426	+		QEN71_RS23015	0.13	+1.3
5,114,426	+		QEN71_RS23015	0.13	+1.1
5,114,427	-		QEN71_RS23015	0.13	+0.9
5,114,427	-		QEN71_RS23015	0.13	-0.4
5,114,427	-		QEN71_RS23015	0.13	+0.5
5,114,427	-		QEN71_RS23015	0.13	+0.6
5,114,427	-		QEN71_RS23015	0.13	+1.2
5,114,442	+		QEN71_RS23015	0.17	+0.9
5,114,442	+		QEN71_RS23015	0.17	-0.3
5,114,442	+		QEN71_RS23015	0.17	+0.3
5,114,443	-		QEN71_RS23015	0.17	+0.4
5,114,493	+		QEN71_RS23015	0.28	+0.7
5,114,493	+		QEN71_RS23015	0.28	+0.3
5,114,493	+		QEN71_RS23015	0.28	-2.0
5,114,493	+		QEN71_RS23015	0.28	-0.2
5,114,494	-		QEN71_RS23015	0.28	+0.1
5,114,494	-		QEN71_RS23015	0.28	+1.2
5,114,494	-		QEN71_RS23015	0.28	+1.1
5,114,535	+		QEN71_RS23015	0.38	+0.2
5,114,535	+		QEN71_RS23015	0.38	+2.2
5,114,535	+		QEN71_RS23015	0.38	+1.0
5,114,535	+		QEN71_RS23015	0.38	+0.3
5,114,535	+		QEN71_RS23015	0.38	-2.0
5,114,536	-		QEN71_RS23015	0.38	+0.7
5,114,536	-		QEN71_RS23015	0.38	-0.4