Experiment: Fumaric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS21740 and QEN71_RS21745 are separated by 203 nucleotides QEN71_RS21745 and QEN71_RS21750 are separated by 188 nucleotides
QEN71_RS21740: QEN71_RS21740 - undecaprenyl-phosphate glucose phosphotransferase, at 4,823,384 to 4,824,781
_RS21740
QEN71_RS21745: QEN71_RS21745 - hypothetical protein, at 4,824,985 to 4,825,206
_RS21745
QEN71_RS21750: QEN71_RS21750 - mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase, at 4,825,395 to 4,826,942
_RS21750
Position (kb)
4825
4826
4827 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4824.475 kb on - strand, within QEN71_RS21740 at 4824.475 kb on - strand, within QEN71_RS21740 at 4824.585 kb on + strand, within QEN71_RS21740 at 4824.586 kb on - strand, within QEN71_RS21740 at 4824.586 kb on - strand, within QEN71_RS21740 at 4824.612 kb on + strand, within QEN71_RS21740 at 4824.612 kb on + strand, within QEN71_RS21740 at 4824.613 kb on - strand, within QEN71_RS21740 at 4824.613 kb on - strand, within QEN71_RS21740 at 4824.613 kb on - strand, within QEN71_RS21740 at 4824.768 kb on - strand at 4824.950 kb on - strand at 4825.114 kb on + strand, within QEN71_RS21745 at 4825.114 kb on + strand, within QEN71_RS21745 at 4825.115 kb on - strand, within QEN71_RS21745 at 4825.115 kb on - strand, within QEN71_RS21745 at 4825.115 kb on - strand, within QEN71_RS21745 at 4825.115 kb on - strand, within QEN71_RS21745 at 4825.146 kb on + strand, within QEN71_RS21745 at 4825.146 kb on + strand, within QEN71_RS21745 at 4825.147 kb on - strand, within QEN71_RS21745 at 4825.147 kb on - strand, within QEN71_RS21745 at 4825.147 kb on - strand, within QEN71_RS21745 at 4825.147 kb on - strand, within QEN71_RS21745 at 4825.147 kb on - strand, within QEN71_RS21745 at 4825.345 kb on - strand at 4825.388 kb on + strand at 4825.388 kb on + strand at 4825.389 kb on - strand at 4825.883 kb on + strand, within QEN71_RS21750 at 4825.883 kb on + strand, within QEN71_RS21750 at 4825.927 kb on - strand, within QEN71_RS21750 at 4825.932 kb on + strand, within QEN71_RS21750 at 4825.974 kb on - strand, within QEN71_RS21750 at 4826.064 kb on + strand, within QEN71_RS21750 at 4826.064 kb on + strand, within QEN71_RS21750 at 4826.064 kb on + strand, within QEN71_RS21750 at 4826.065 kb on - strand, within QEN71_RS21750 at 4826.065 kb on - strand, within QEN71_RS21750 at 4826.083 kb on - strand, within QEN71_RS21750 at 4826.632 kb on - strand, within QEN71_RS21750 at 4826.808 kb on + strand at 4826.808 kb on + strand at 4826.808 kb on + strand at 4826.808 kb on + strand at 4826.809 kb on - strand at 4826.809 kb on - strand at 4826.809 kb on - strand at 4826.809 kb on - strand at 4826.809 kb on - strand at 4826.811 kb on - strand at 4826.890 kb on - strand at 4826.928 kb on + strand at 4826.928 kb on + strand at 4826.940 kb on + strand at 4826.940 kb on + strand at 4826.940 kb on + strand at 4826.940 kb on + strand at 4826.940 kb on + strand at 4826.941 kb on - strand at 4826.941 kb on - strand at 4826.941 kb on - strand at 4826.941 kb on - strand at 4826.941 kb on - strand at 4827.392 kb on + strand at 4827.565 kb on + strand at 4827.565 kb on + strand at 4827.565 kb on + strand at 4827.565 kb on + strand at 4827.565 kb on + strand at 4827.565 kb on + strand at 4827.565 kb on + strand at 4827.565 kb on + strand at 4827.565 kb on + strand at 4827.565 kb on + strand at 4827.565 kb on + strand at 4827.565 kb on + strand at 4827.566 kb on - strand at 4827.566 kb on - strand at 4827.566 kb on - strand at 4827.566 kb on - strand at 4827.566 kb on - strand at 4827.566 kb on - strand at 4827.566 kb on - strand at 4827.574 kb on + strand at 4827.575 kb on - strand at 4827.780 kb on + strand at 4827.780 kb on + strand at 4827.780 kb on + strand at 4827.781 kb on - strand at 4827.781 kb on - strand at 4827.781 kb on - strand at 4827.781 kb on - strand at 4827.781 kb on - strand at 4827.781 kb on - strand at 4827.781 kb on - strand at 4827.781 kb on - strand at 4827.781 kb on - strand at 4827.781 kb on - strand at 4827.781 kb on - strand at 4827.781 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Fumaric (C) remove 4,824,475 - QEN71_RS21740 0.78 +0.9 4,824,475 - QEN71_RS21740 0.78 +0.2 4,824,585 + QEN71_RS21740 0.86 -0.0 4,824,586 - QEN71_RS21740 0.86 +0.4 4,824,586 - QEN71_RS21740 0.86 -0.7 4,824,612 + QEN71_RS21740 0.88 +1.1 4,824,612 + QEN71_RS21740 0.88 -1.1 4,824,613 - QEN71_RS21740 0.88 +0.5 4,824,613 - QEN71_RS21740 0.88 +0.2 4,824,613 - QEN71_RS21740 0.88 -0.2 4,824,768 - +0.3 4,824,950 - +1.8 4,825,114 + QEN71_RS21745 0.58 -0.1 4,825,114 + QEN71_RS21745 0.58 -1.2 4,825,115 - QEN71_RS21745 0.59 -0.8 4,825,115 - QEN71_RS21745 0.59 -2.5 4,825,115 - QEN71_RS21745 0.59 -0.4 4,825,115 - QEN71_RS21745 0.59 +0.3 4,825,146 + QEN71_RS21745 0.73 +0.5 4,825,146 + QEN71_RS21745 0.73 -0.5 4,825,147 - QEN71_RS21745 0.73 +0.2 4,825,147 - QEN71_RS21745 0.73 +0.6 4,825,147 - QEN71_RS21745 0.73 +0.1 4,825,147 - QEN71_RS21745 0.73 -0.1 4,825,147 - QEN71_RS21745 0.73 -0.2 4,825,345 - -0.1 4,825,388 + +0.1 4,825,388 + +1.2 4,825,389 - +2.1 4,825,883 + QEN71_RS21750 0.32 +0.8 4,825,883 + QEN71_RS21750 0.32 -1.3 4,825,927 - QEN71_RS21750 0.34 +0.1 4,825,932 + QEN71_RS21750 0.35 -0.2 4,825,974 - QEN71_RS21750 0.37 +0.1 4,826,064 + QEN71_RS21750 0.43 +0.2 4,826,064 + QEN71_RS21750 0.43 +0.4 4,826,064 + QEN71_RS21750 0.43 +1.1 4,826,065 - QEN71_RS21750 0.43 +0.6 4,826,065 - QEN71_RS21750 0.43 -0.4 4,826,083 - QEN71_RS21750 0.44 +1.2 4,826,632 - QEN71_RS21750 0.80 -0.4 4,826,808 + +0.5 4,826,808 + +0.9 4,826,808 + +0.7 4,826,808 + +0.6 4,826,809 - +0.3 4,826,809 - -0.8 4,826,809 - -1.8 4,826,809 - -0.6 4,826,809 - -0.1 4,826,811 - +1.6 4,826,890 - +0.1 4,826,928 + +0.1 4,826,928 + +1.4 4,826,940 + -0.2 4,826,940 + -0.7 4,826,940 + +0.3 4,826,940 + +0.1 4,826,940 + +0.3 4,826,941 - +0.6 4,826,941 - -0.3 4,826,941 - -0.6 4,826,941 - -0.1 4,826,941 - -0.5 4,827,392 + +0.6 4,827,565 + +0.7 4,827,565 + -0.4 4,827,565 + +1.2 4,827,565 + -0.2 4,827,565 + -0.2 4,827,565 + +0.2 4,827,565 + -1.0 4,827,565 + -0.3 4,827,565 + +0.3 4,827,565 + -0.6 4,827,565 + -0.4 4,827,565 + +0.2 4,827,566 - +0.9 4,827,566 - -1.6 4,827,566 - -0.3 4,827,566 - -1.0 4,827,566 - -1.0 4,827,566 - -0.1 4,827,566 - +1.4 4,827,574 + -0.5 4,827,575 - +0.4 4,827,780 + +0.5 4,827,780 + +0.3 4,827,780 + -0.1 4,827,781 - +0.1 4,827,781 - -1.1 4,827,781 - +0.2 4,827,781 - -0.9 4,827,781 - -0.3 4,827,781 - -1.2 4,827,781 - -0.5 4,827,781 - -0.4 4,827,781 - -0.8 4,827,781 - -1.2 4,827,781 - +0.6 4,827,781 - +1.6
Or see this region's nucleotide sequence