Experiment: Fumaric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS18695 and QEN71_RS18700 are separated by 296 nucleotides QEN71_RS18700 and QEN71_RS18705 are separated by 28 nucleotides
QEN71_RS18695: QEN71_RS18695 - AraC family transcriptional regulator, at 4,162,276 to 4,163,271
_RS18695
QEN71_RS18700: QEN71_RS18700 - electron transfer flavoprotein subunit beta/FixA family protein, at 4,163,568 to 4,164,317
_RS18700
QEN71_RS18705: QEN71_RS18705 - electron transfer flavoprotein subunit alpha/FixB family protein, at 4,164,346 to 4,165,281
_RS18705
Position (kb) 4163
4164
4165 Strain fitness (log2 ratio) -1
0
1 at 4162.604 kb on - strand, within QEN71_RS18695 at 4162.711 kb on - strand, within QEN71_RS18695 at 4162.711 kb on - strand, within QEN71_RS18695 at 4162.792 kb on + strand, within QEN71_RS18695 at 4162.906 kb on + strand, within QEN71_RS18695 at 4162.971 kb on + strand, within QEN71_RS18695 at 4162.972 kb on - strand, within QEN71_RS18695 at 4162.977 kb on + strand, within QEN71_RS18695 at 4162.977 kb on + strand, within QEN71_RS18695 at 4162.978 kb on - strand, within QEN71_RS18695 at 4162.982 kb on - strand, within QEN71_RS18695 at 4162.982 kb on - strand, within QEN71_RS18695 at 4163.045 kb on + strand, within QEN71_RS18695 at 4163.045 kb on + strand, within QEN71_RS18695 at 4163.046 kb on - strand, within QEN71_RS18695 at 4163.046 kb on - strand, within QEN71_RS18695 at 4163.070 kb on + strand, within QEN71_RS18695 at 4163.126 kb on + strand, within QEN71_RS18695 at 4163.131 kb on + strand, within QEN71_RS18695 at 4163.132 kb on - strand, within QEN71_RS18695 at 4163.132 kb on - strand, within QEN71_RS18695 at 4163.182 kb on + strand at 4163.269 kb on + strand at 4163.371 kb on + strand at 4163.371 kb on + strand at 4163.372 kb on - strand at 4163.372 kb on - strand at 4163.372 kb on - strand at 4163.400 kb on - strand at 4163.481 kb on + strand at 4163.482 kb on - strand at 4163.556 kb on + strand at 4163.587 kb on + strand at 4163.596 kb on + strand at 4163.596 kb on + strand at 4163.597 kb on - strand at 4163.605 kb on - strand at 4164.360 kb on - strand at 4164.727 kb on + strand, within QEN71_RS18705 at 4164.727 kb on + strand, within QEN71_RS18705
Per-strain Table
Position Strand Gene LocusTag Fraction Fumaric (C) remove 4,162,604 - QEN71_RS18695 0.33 +0.7 4,162,711 - QEN71_RS18695 0.44 -0.0 4,162,711 - QEN71_RS18695 0.44 +0.9 4,162,792 + QEN71_RS18695 0.52 +1.1 4,162,906 + QEN71_RS18695 0.63 -1.3 4,162,971 + QEN71_RS18695 0.70 +0.6 4,162,972 - QEN71_RS18695 0.70 +0.2 4,162,977 + QEN71_RS18695 0.70 -0.2 4,162,977 + QEN71_RS18695 0.70 +0.4 4,162,978 - QEN71_RS18695 0.70 -0.2 4,162,982 - QEN71_RS18695 0.71 -0.0 4,162,982 - QEN71_RS18695 0.71 +0.2 4,163,045 + QEN71_RS18695 0.77 -1.4 4,163,045 + QEN71_RS18695 0.77 +0.6 4,163,046 - QEN71_RS18695 0.77 -0.7 4,163,046 - QEN71_RS18695 0.77 +1.7 4,163,070 + QEN71_RS18695 0.80 +1.0 4,163,126 + QEN71_RS18695 0.85 -0.7 4,163,131 + QEN71_RS18695 0.86 -0.3 4,163,132 - QEN71_RS18695 0.86 -0.4 4,163,132 - QEN71_RS18695 0.86 +0.7 4,163,182 + -0.2 4,163,269 + +0.8 4,163,371 + -0.0 4,163,371 + +1.1 4,163,372 - -0.7 4,163,372 - -0.6 4,163,372 - +0.1 4,163,400 - -1.0 4,163,481 + -0.6 4,163,482 - +0.2 4,163,556 + -0.0 4,163,587 + -0.9 4,163,596 + -0.9 4,163,596 + +0.2 4,163,597 - -0.2 4,163,605 - -0.8 4,164,360 - -0.6 4,164,727 + QEN71_RS18705 0.41 +0.1 4,164,727 + QEN71_RS18705 0.41 -1.1
Or see this region's nucleotide sequence