Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS15735

Experiment: biofilm; Day1; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day1; NLDM;
3,441,758	+		LRK53_RS15720	0.86	-1.0
3,441,758	+		LRK53_RS15720	0.86	-3.6
3,441,758	+		LRK53_RS15720	0.86	-0.7
3,441,758	+		LRK53_RS15720	0.86	-0.6
3,441,758	+		LRK53_RS15720	0.86	+1.2
3,441,758	+		LRK53_RS15720	0.86	+0.8
3,441,758	+		LRK53_RS15720	0.86	-1.3
3,441,758	+		LRK53_RS15720	0.86	+0.5
3,441,758	+		LRK53_RS15720	0.86	-0.2
3,441,758	+		LRK53_RS15720	0.86	-0.8
3,441,758	+		LRK53_RS15720	0.86	-1.2
3,441,758	+		LRK53_RS15720	0.86	-1.6
3,441,758	+		LRK53_RS15720	0.86	-0.5
3,441,758	+		LRK53_RS15720	0.86	-1.4
3,441,758	+		LRK53_RS15720	0.86	+0.5
3,441,758	+		LRK53_RS15720	0.86	-0.2
3,441,759	-		LRK53_RS15720	0.86	-1.2
3,441,759	-		LRK53_RS15720	0.86	-0.5
3,441,759	-		LRK53_RS15720	0.86	-0.3
3,441,759	-		LRK53_RS15720	0.86	+0.0
3,441,759	-		LRK53_RS15720	0.86	-0.6
3,441,759	-		LRK53_RS15720	0.86	-0.8
3,441,759	-		LRK53_RS15720	0.86	+0.0
3,441,759	-		LRK53_RS15720	0.86	-0.2
3,441,759	-		LRK53_RS15720	0.86	-1.3
3,441,759	-		LRK53_RS15720	0.86	+0.2
3,441,759	-		LRK53_RS15720	0.86	-0.8
3,441,759	-		LRK53_RS15720	0.86	-2.1
3,441,759	-		LRK53_RS15720	0.86	-0.6
3,441,759	-		LRK53_RS15720	0.86	-1.3
3,441,806	+				-0.6
3,441,806	+				-0.5
3,441,806	+				-1.2
3,441,806	+				-1.2
3,441,806	+				+1.2
3,441,806	+				-1.2
3,441,807	-				-1.0
3,441,807	-				-1.1
3,441,807	-				+0.3
3,441,834	-				+0.2
3,442,134	+		LRK53_RS15725	0.53	-1.7
3,442,134	+		LRK53_RS15725	0.53	-1.2
3,442,134	+		LRK53_RS15725	0.53	-1.0
3,442,134	+		LRK53_RS15725	0.53	+0.0
3,442,134	+		LRK53_RS15725	0.53	-1.6
3,442,135	-		LRK53_RS15725	0.53	-1.7
3,442,135	-		LRK53_RS15725	0.53	-1.4
3,442,135	-		LRK53_RS15725	0.53	-3.0
3,442,135	-		LRK53_RS15725	0.53	-0.3
3,442,135	-		LRK53_RS15725	0.53	-1.2
3,442,135	-		LRK53_RS15725	0.53	-1.6
3,442,135	-		LRK53_RS15725	0.53	-1.5
3,442,135	-		LRK53_RS15725	0.53	+1.7
3,442,183	+		LRK53_RS15725	0.65	-1.6
3,442,183	+		LRK53_RS15725	0.65	-0.5
3,442,183	+		LRK53_RS15725	0.65	-1.7
3,442,183	+		LRK53_RS15725	0.65	-0.8
3,442,183	+		LRK53_RS15725	0.65	-1.5
3,442,183	+		LRK53_RS15725	0.65	-1.0
3,442,183	+		LRK53_RS15725	0.65	-1.3
3,442,183	+		LRK53_RS15725	0.65	-1.0
3,442,183	+		LRK53_RS15725	0.65	-0.2
3,442,183	+		LRK53_RS15725	0.65	-1.6
3,442,183	+		LRK53_RS15725	0.65	-1.2
3,442,183	+		LRK53_RS15725	0.65	-2.0
3,442,183	+		LRK53_RS15725	0.65	-1.1
3,442,183	+		LRK53_RS15725	0.65	-0.7
3,442,183	+		LRK53_RS15725	0.65	-0.5
3,442,183	+		LRK53_RS15725	0.65	-0.4
3,442,183	+		LRK53_RS15725	0.65	-2.1
3,442,183	+		LRK53_RS15725	0.65	-1.5
3,442,183	+		LRK53_RS15725	0.65	-2.0
3,442,183	+		LRK53_RS15725	0.65	-2.0
3,442,183	+		LRK53_RS15725	0.65	+0.5
3,442,183	+		LRK53_RS15725	0.65	-0.3
3,442,183	+		LRK53_RS15725	0.65	-0.9
3,442,183	+		LRK53_RS15725	0.65	-1.3
3,442,183	+		LRK53_RS15725	0.65	+0.5
3,442,183	+		LRK53_RS15725	0.65	-1.5
3,442,183	+		LRK53_RS15725	0.65	-1.0
3,442,183	+		LRK53_RS15725	0.65	-2.2
3,442,183	+		LRK53_RS15725	0.65	-1.0
3,442,184	-		LRK53_RS15725	0.65	+1.5
3,442,184	-		LRK53_RS15725	0.65	-1.0
3,442,184	-		LRK53_RS15725	0.65	-1.0
3,442,184	-		LRK53_RS15725	0.65	-1.1
3,442,184	-		LRK53_RS15725	0.65	-0.1
3,442,184	-		LRK53_RS15725	0.65	-1.4
3,442,184	-		LRK53_RS15725	0.65	+0.1
3,442,184	-		LRK53_RS15725	0.65	-0.6
3,442,184	-		LRK53_RS15725	0.65	-2.3
3,442,184	-		LRK53_RS15725	0.65	-1.3
3,442,184	-		LRK53_RS15725	0.65	-0.7
3,442,184	-		LRK53_RS15725	0.65	-1.5
3,442,184	-		LRK53_RS15725	0.65	-0.6
3,442,184	-		LRK53_RS15725	0.65	-0.3
3,442,184	-		LRK53_RS15725	0.65	-1.9
3,442,184	-		LRK53_RS15725	0.65	-1.6
3,442,184	-		LRK53_RS15725	0.65	-1.8
3,442,184	-		LRK53_RS15725	0.65	-1.4
3,442,184	-		LRK53_RS15725	0.65	-0.2
3,442,184	-		LRK53_RS15725	0.65	-0.3
3,442,184	-		LRK53_RS15725	0.65	-0.6
3,442,184	-		LRK53_RS15725	0.65	-1.0
3,442,184	-		LRK53_RS15725	0.65	-1.0
3,442,184	-		LRK53_RS15725	0.65	-0.5
3,442,184	-		LRK53_RS15725	0.65	-1.0
3,442,184	-		LRK53_RS15725	0.65	-2.2
3,442,184	-		LRK53_RS15725	0.65	-1.5
3,442,231	+		LRK53_RS15725	0.77	-2.1
3,442,231	+		LRK53_RS15725	0.77	-1.8
3,442,231	+		LRK53_RS15725	0.77	-1.1
3,442,231	+		LRK53_RS15725	0.77	-2.4
3,442,231	+		LRK53_RS15725	0.77	-1.1
3,442,232	-		LRK53_RS15725	0.78	-0.5
3,442,239	+		LRK53_RS15725	0.79	+1.6
3,442,239	+		LRK53_RS15725	0.79	-1.2
3,442,239	+		LRK53_RS15725	0.79	-0.7
3,442,239	+		LRK53_RS15725	0.79	-0.9
3,442,239	+		LRK53_RS15725	0.79	-2.9
3,442,239	+		LRK53_RS15725	0.79	-0.5
3,442,239	+		LRK53_RS15725	0.79	-0.4
3,442,239	+		LRK53_RS15725	0.79	-1.5
3,442,239	+		LRK53_RS15725	0.79	-0.9
3,442,239	+		LRK53_RS15725	0.79	-0.8
3,442,239	+		LRK53_RS15725	0.79	-1.3
3,442,239	+		LRK53_RS15725	0.79	-1.2
3,442,239	+		LRK53_RS15725	0.79	-1.1
3,442,239	+		LRK53_RS15725	0.79	-3.1
3,442,239	+		LRK53_RS15725	0.79	-1.4
3,442,239	+		LRK53_RS15725	0.79	-1.9
3,442,239	+		LRK53_RS15725	0.79	-1.9
3,442,239	+		LRK53_RS15725	0.79	-2.3
3,442,239	+		LRK53_RS15725	0.79	-1.2
3,442,239	+		LRK53_RS15725	0.79	-1.5
3,442,239	+		LRK53_RS15725	0.79	-0.7
3,442,239	+		LRK53_RS15725	0.79	-1.0
3,442,239	+		LRK53_RS15725	0.79	-1.4
3,442,239	+		LRK53_RS15725	0.79	-1.8
3,442,239	+		LRK53_RS15725	0.79	+0.0
3,442,239	+		LRK53_RS15725	0.79	-2.1
3,442,239	+		LRK53_RS15725	0.79	-1.0
3,442,239	+		LRK53_RS15725	0.79	-1.4
3,442,239	+		LRK53_RS15725	0.79	-2.5
3,442,239	+		LRK53_RS15725	0.79	-0.9
3,442,239	+		LRK53_RS15725	0.79	-0.4
3,442,239	+		LRK53_RS15725	0.79	+0.5
3,442,240	-		LRK53_RS15725	0.80	-0.8
3,442,240	-		LRK53_RS15725	0.80	-1.3
3,442,240	-		LRK53_RS15725	0.80	-0.5
3,442,240	-		LRK53_RS15725	0.80	-1.9
3,442,240	-		LRK53_RS15725	0.80	-0.3
3,442,240	-		LRK53_RS15725	0.80	+0.1
3,442,240	-		LRK53_RS15725	0.80	-0.3
3,442,240	-		LRK53_RS15725	0.80	-2.6
3,442,240	-		LRK53_RS15725	0.80	+0.1
3,442,240	-		LRK53_RS15725	0.80	-0.7
3,442,240	-		LRK53_RS15725	0.80	-2.2
3,442,240	-		LRK53_RS15725	0.80	-1.0
3,442,240	-		LRK53_RS15725	0.80	-0.6
3,442,240	-		LRK53_RS15725	0.80	-1.8
3,442,240	-		LRK53_RS15725	0.80	-1.6
3,442,240	-		LRK53_RS15725	0.80	-3.0
3,442,240	-		LRK53_RS15725	0.80	-1.2
3,442,240	-		LRK53_RS15725	0.80	-2.5
3,442,240	-		LRK53_RS15725	0.80	-2.1
3,442,240	-		LRK53_RS15725	0.80	-0.6
3,442,240	-		LRK53_RS15725	0.80	-0.4
3,442,240	-		LRK53_RS15725	0.80	+0.1
3,442,240	-		LRK53_RS15725	0.80	+0.8
3,442,240	-		LRK53_RS15725	0.80	-0.5
3,442,240	-		LRK53_RS15725	0.80	-0.3
3,442,240	-		LRK53_RS15725	0.80	-1.0
3,442,240	-		LRK53_RS15725	0.80	-1.0
3,442,240	-		LRK53_RS15725	0.80	-0.4
3,442,240	-		LRK53_RS15725	0.80	-1.8
3,442,240	-		LRK53_RS15725	0.80	-1.7
3,442,379	+		LRK53_RS15730	0.25	+0.6
3,442,380	-		LRK53_RS15730	0.25	-0.7
3,442,380	-		LRK53_RS15730	0.25	+0.2
3,444,191	+		LRK53_RS15735	0.82	+1.2
3,444,192	-		LRK53_RS15735	0.83	-0.8
3,444,192	-		LRK53_RS15735	0.83	-0.6
3,444,369	+				+0.2
3,444,370	-				-0.8
3,444,501	+				+1.1
3,444,502	-				-0.4
3,444,721	+		LRK53_RS15740	0.11	-2.3
3,444,721	+		LRK53_RS15740	0.11	-1.1
3,444,721	+		LRK53_RS15740	0.11	-0.3
3,444,721	+		LRK53_RS15740	0.11	-0.9
3,444,721	+		LRK53_RS15740	0.11	-0.3
3,444,721	+		LRK53_RS15740	0.11	-0.3
3,444,721	+		LRK53_RS15740	0.11	-1.1
3,444,721	+		LRK53_RS15740	0.11	+0.0
3,444,721	+		LRK53_RS15740	0.11	-0.8
3,444,721	+		LRK53_RS15740	0.11	-0.0
3,444,721	+		LRK53_RS15740	0.11	+0.4
3,444,722	-		LRK53_RS15740	0.11	+0.5
3,444,722	-		LRK53_RS15740	0.11	+1.2
3,444,722	-		LRK53_RS15740	0.11	-0.5
3,444,722	-		LRK53_RS15740	0.11	-0.5
3,444,722	-		LRK53_RS15740	0.11	+0.5
3,444,722	-		LRK53_RS15740	0.11	+0.3
3,444,722	-		LRK53_RS15740	0.11	+0.7
3,444,722	-		LRK53_RS15740	0.11	+1.1
3,444,726	+		LRK53_RS15740	0.12	+0.6
3,444,726	+		LRK53_RS15740	0.12	-0.1
3,444,726	+		LRK53_RS15740	0.12	-0.8
3,444,726	+		LRK53_RS15740	0.12	-0.3
3,444,726	+		LRK53_RS15740	0.12	-2.5
3,444,726	+		LRK53_RS15740	0.12	-1.1
3,444,726	+		LRK53_RS15740	0.12	+1.1
3,444,726	+		LRK53_RS15740	0.12	-2.5
3,444,726	+		LRK53_RS15740	0.12	-1.0
3,444,726	+		LRK53_RS15740	0.12	-0.6
3,444,726	+		LRK53_RS15740	0.12	-1.6
3,444,726	+		LRK53_RS15740	0.12	-0.2
3,444,726	+		LRK53_RS15740	0.12	-1.1
3,444,726	+		LRK53_RS15740	0.12	+0.1
3,444,726	+		LRK53_RS15740	0.12	+0.2
3,444,726	+		LRK53_RS15740	0.12	-0.6
3,444,726	+		LRK53_RS15740	0.12	-0.5
3,444,726	+		LRK53_RS15740	0.12	-0.3
3,444,726	+		LRK53_RS15740	0.12	-1.5
3,444,726	+		LRK53_RS15740	0.12	-0.8
3,444,726	+		LRK53_RS15740	0.12	+0.0
3,444,726	+		LRK53_RS15740	0.12	-0.2
3,444,726	+		LRK53_RS15740	0.12	-1.0
3,444,726	+		LRK53_RS15740	0.12	-0.2
3,444,726	+		LRK53_RS15740	0.12	-0.2
3,444,726	+		LRK53_RS15740	0.12	+0.6
3,444,726	+		LRK53_RS15740	0.12	-0.6
3,444,726	+		LRK53_RS15740	0.12	-1.3
3,444,726	+		LRK53_RS15740	0.12	-0.9
3,444,726	+		LRK53_RS15740	0.12	-1.3
3,444,726	+		LRK53_RS15740	0.12	-2.2
3,444,726	+		LRK53_RS15740	0.12	-1.2
3,444,726	+		LRK53_RS15740	0.12	+0.6
3,444,726	+		LRK53_RS15740	0.12	-1.1
3,444,726	+		LRK53_RS15740	0.12	-0.2
3,444,726	+		LRK53_RS15740	0.12	-3.5
3,444,726	+		LRK53_RS15740	0.12	+1.1
3,444,726	+		LRK53_RS15740	0.12	-1.4
3,444,726	+		LRK53_RS15740	0.12	+0.2
3,444,727	-		LRK53_RS15740	0.12	+0.5
3,444,727	-		LRK53_RS15740	0.12	+0.0
3,444,727	-		LRK53_RS15740	0.12	-0.0
3,444,727	-		LRK53_RS15740	0.12	+0.2
3,444,727	-		LRK53_RS15740	0.12	-1.8
3,444,727	-		LRK53_RS15740	0.12	+0.1
3,444,727	-		LRK53_RS15740	0.12	+0.1
3,444,727	-		LRK53_RS15740	0.12	+0.5
3,444,727	-		LRK53_RS15740	0.12	-1.5
3,444,727	-		LRK53_RS15740	0.12	-0.5
3,444,727	-		LRK53_RS15740	0.12	-0.8
3,444,727	-		LRK53_RS15740	0.12	+1.8
3,444,727	-		LRK53_RS15740	0.12	+2.8
3,444,727	-		LRK53_RS15740	0.12	+0.5
3,444,727	-		LRK53_RS15740	0.12	-0.9
3,444,727	-		LRK53_RS15740	0.12	-0.5
3,444,727	-		LRK53_RS15740	0.12	-0.9
3,444,727	-		LRK53_RS15740	0.12	-0.2
3,444,727	-		LRK53_RS15740	0.12	+0.6
3,444,727	-		LRK53_RS15740	0.12	-1.3
3,444,727	-		LRK53_RS15740	0.12	+0.3
3,444,727	-		LRK53_RS15740	0.12	-0.9
3,444,727	-		LRK53_RS15740	0.12	-0.0
3,444,727	-		LRK53_RS15740	0.12	+0.2
3,444,727	-		LRK53_RS15740	0.12	+1.8
3,444,727	-		LRK53_RS15740	0.12	+1.8
3,444,727	-		LRK53_RS15740	0.12	+0.9
3,444,727	-		LRK53_RS15740	0.12	-2.0
3,444,727	-		LRK53_RS15740	0.12	-3.1
3,444,727	-		LRK53_RS15740	0.12	-1.6
3,444,727	-		LRK53_RS15740	0.12	-0.3
3,444,727	-		LRK53_RS15740	0.12	-0.9
3,444,727	-		LRK53_RS15740	0.12	-1.6
3,444,727	-		LRK53_RS15740	0.12	-0.2
3,444,727	-		LRK53_RS15740	0.12	-0.6
3,444,727	-		LRK53_RS15740	0.12	-1.8
3,444,727	-		LRK53_RS15740	0.12	+0.4
3,444,727	-		LRK53_RS15740	0.12	-1.6
3,444,727	-		LRK53_RS15740	0.12	-2.1
3,444,727	-		LRK53_RS15740	0.12	-1.3
3,444,727	-		LRK53_RS15740	0.12	-0.2
3,444,727	-		LRK53_RS15740	0.12	+1.1
3,444,727	-		LRK53_RS15740	0.12	+0.1
3,444,727	-		LRK53_RS15740	0.12	+1.1
3,444,727	-		LRK53_RS15740	0.12	-2.0
3,444,727	-		LRK53_RS15740	0.12	-1.6
3,444,727	-		LRK53_RS15740	0.12	+0.7
3,444,727	-		LRK53_RS15740	0.12	-0.9
3,444,727	-		LRK53_RS15740	0.12	+2.0
3,444,727	-		LRK53_RS15740	0.12	+2.2
3,444,727	-		LRK53_RS15740	0.12	+0.0
3,444,964	+		LRK53_RS15740	0.80	-1.1
3,444,965	-		LRK53_RS15740	0.80	+1.2
3,444,965	-		LRK53_RS15740	0.80	-0.4
3,444,965	-		LRK53_RS15740	0.80	-1.0
3,444,965	-		LRK53_RS15740	0.80	-1.2
3,444,965	-		LRK53_RS15740	0.80	+0.1
3,444,965	-		LRK53_RS15740	0.80	-1.7
3,444,965	-		LRK53_RS15740	0.80	+2.2
3,444,965	-		LRK53_RS15740	0.80	+0.5
3,444,965	-		LRK53_RS15740	0.80	+0.2
3,445,222	+				-0.9
3,445,222	+				+0.2
3,445,222	+				+0.2
3,445,222	+				+0.2
3,445,223	-				+0.8
3,445,223	-				-1.0
3,445,223	-				+1.2
3,445,223	-				-1.6
3,445,223	-				+0.0
3,445,241	+				-1.2
3,445,241	+				-0.2
3,445,241	+				-0.5
3,445,241	+				-1.5
3,445,241	+				-0.4
3,445,241	+				-2.6
3,445,241	+				+1.0
3,445,241	+				-1.0
3,445,241	+				-0.0
3,445,241	+				+0.3
3,445,241	+				+0.6
3,445,241	+				-1.3
3,445,242	-				-2.7
3,445,242	-				-1.2
3,445,242	-				-1.1
3,445,242	-				-1.5
3,445,242	-				+0.5
3,445,242	-				-2.5
3,445,242	-				-0.8
3,445,242	-				-1.9
3,445,242	-				+0.2
3,445,242	-				+0.4
3,445,242	-				-0.7
3,445,248	+				+0.1
3,445,248	+				-2.9
3,445,248	+				-1.0
3,445,248	+				+0.2
3,445,248	+				-1.1
3,445,248	+				-1.7
3,445,249	-				+0.2
3,445,249	-				-0.4
3,445,249	-				-1.8
3,445,249	-				+1.0
3,445,249	-				-0.7
3,445,262	-				+1.5
3,445,273	+				-1.3
3,445,273	+				-0.8
3,445,273	+				+0.1
3,445,434	+		LRK53_RS15750	0.13	-1.0
3,445,435	-		LRK53_RS15750	0.13	-2.2
3,445,435	-		LRK53_RS15750	0.13	-0.3