Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS00235

Experiment: biofilm; Day1; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day1; NLDM;
58,578	+		LRK53_RS00230	0.74	-0.7
58,578	+		LRK53_RS00230	0.74	-0.4
58,578	+		LRK53_RS00230	0.74	+0.6
58,578	+		LRK53_RS00230	0.74	+1.5
58,578	+		LRK53_RS00230	0.74	+0.1
58,578	+		LRK53_RS00230	0.74	+0.1
58,578	+		LRK53_RS00230	0.74	-0.2
58,578	+		LRK53_RS00230	0.74	-0.9
58,578	+		LRK53_RS00230	0.74	+1.7
58,578	+		LRK53_RS00230	0.74	-0.9
58,578	+		LRK53_RS00230	0.74	-0.4
58,579	-		LRK53_RS00230	0.74	+0.6
58,579	-		LRK53_RS00230	0.74	+0.1
58,579	-		LRK53_RS00230	0.74	-1.4
58,579	-		LRK53_RS00230	0.74	+0.3
58,579	-		LRK53_RS00230	0.74	+0.5
58,579	-		LRK53_RS00230	0.74	+0.3
58,579	-		LRK53_RS00230	0.74	+0.3
58,579	-		LRK53_RS00230	0.74	+0.0
58,579	-		LRK53_RS00230	0.74	-2.7
58,579	-		LRK53_RS00230	0.74	-0.2
58,579	-		LRK53_RS00230	0.74	-0.9
58,579	-		LRK53_RS00230	0.74	+0.1
58,579	-		LRK53_RS00230	0.74	-0.8
58,584	+		LRK53_RS00230	0.74	+0.3
58,584	+		LRK53_RS00230	0.74	-0.5
58,584	+		LRK53_RS00230	0.74	+0.6
58,584	+		LRK53_RS00230	0.74	-1.2
58,584	+		LRK53_RS00230	0.74	+0.5
58,584	+		LRK53_RS00230	0.74	-0.8
58,584	+		LRK53_RS00230	0.74	-1.0
58,584	+		LRK53_RS00230	0.74	-0.9
58,584	+		LRK53_RS00230	0.74	-0.5
58,584	+		LRK53_RS00230	0.74	+0.3
58,584	+		LRK53_RS00230	0.74	-0.1
58,584	+		LRK53_RS00230	0.74	-0.4
58,584	+		LRK53_RS00230	0.74	-1.2
58,584	+		LRK53_RS00230	0.74	+0.9
58,584	+		LRK53_RS00230	0.74	-0.7
58,584	+		LRK53_RS00230	0.74	-0.3
58,584	+		LRK53_RS00230	0.74	-0.5
58,584	+		LRK53_RS00230	0.74	+0.1
58,584	+		LRK53_RS00230	0.74	+0.1
58,584	+		LRK53_RS00230	0.74	+0.8
58,584	+		LRK53_RS00230	0.74	+0.5
58,585	-		LRK53_RS00230	0.74	+1.7
58,585	-		LRK53_RS00230	0.74	-1.2
58,585	-		LRK53_RS00230	0.74	-0.7
58,585	-		LRK53_RS00230	0.74	-1.8
58,585	-		LRK53_RS00230	0.74	-0.7
58,585	-		LRK53_RS00230	0.74	-1.1
58,585	-		LRK53_RS00230	0.74	+1.8
58,585	-		LRK53_RS00230	0.74	-0.9
58,585	-		LRK53_RS00230	0.74	+0.3
58,585	-		LRK53_RS00230	0.74	-2.1
58,585	-		LRK53_RS00230	0.74	-0.8
58,585	-		LRK53_RS00230	0.74	+0.5
58,585	-		LRK53_RS00230	0.74	-0.2
58,585	-		LRK53_RS00230	0.74	+1.5
58,585	-		LRK53_RS00230	0.74	-0.1
58,585	-		LRK53_RS00230	0.74	-0.5
58,585	-		LRK53_RS00230	0.74	-0.9
58,585	-		LRK53_RS00230	0.74	-0.5
58,585	-		LRK53_RS00230	0.74	+0.7
58,585	-		LRK53_RS00230	0.74	-0.9
58,585	-		LRK53_RS00230	0.74	+0.1
58,585	-		LRK53_RS00230	0.74	+0.2
58,585	-		LRK53_RS00230	0.74	+1.7
58,647	+		LRK53_RS00230	0.76	-0.7
58,647	+		LRK53_RS00230	0.76	-0.2
58,647	+		LRK53_RS00230	0.76	-2.1
58,647	+		LRK53_RS00230	0.76	-2.4
58,648	-		LRK53_RS00230	0.76	-1.0
58,713	+		LRK53_RS00230	0.78	-1.8
58,713	+		LRK53_RS00230	0.78	-1.5
58,713	+		LRK53_RS00230	0.78	+1.1
58,713	+		LRK53_RS00230	0.78	-1.8
58,713	+		LRK53_RS00230	0.78	-0.1
58,714	-		LRK53_RS00230	0.78	-1.2
58,714	-		LRK53_RS00230	0.78	-0.4
58,714	-		LRK53_RS00230	0.78	+0.2
58,714	-		LRK53_RS00230	0.78	-0.8
58,765	-		LRK53_RS00230	0.80	-0.5
58,765	-		LRK53_RS00230	0.80	-0.2
58,765	-		LRK53_RS00230	0.80	+0.7
58,765	-		LRK53_RS00230	0.80	-0.7
58,765	-		LRK53_RS00230	0.80	+1.7
58,765	-		LRK53_RS00230	0.80	-0.8
58,765	-		LRK53_RS00230	0.80	-0.1
58,782	+		LRK53_RS00230	0.80	+0.3
58,782	+		LRK53_RS00230	0.80	-0.5
58,782	+		LRK53_RS00230	0.80	+1.0
58,782	+		LRK53_RS00230	0.80	+0.5
58,782	+		LRK53_RS00230	0.80	-0.0
58,783	-		LRK53_RS00230	0.80	-0.2
58,783	-		LRK53_RS00230	0.80	+0.6
58,783	-		LRK53_RS00230	0.80	-0.8
58,783	-		LRK53_RS00230	0.80	+0.7
58,783	-		LRK53_RS00230	0.80	-0.2
58,783	-		LRK53_RS00230	0.80	+0.3
58,783	-		LRK53_RS00230	0.80	+0.1
58,863	+		LRK53_RS00230	0.83	-2.4
58,864	-		LRK53_RS00230	0.83	-0.7
58,864	-		LRK53_RS00230	0.83	-2.9
58,864	-		LRK53_RS00230	0.83	-0.4
58,864	-		LRK53_RS00230	0.83	+0.9
58,864	-		LRK53_RS00230	0.83	-0.9
58,919	+		LRK53_RS00230	0.84	-0.2
58,919	+		LRK53_RS00230	0.84	-1.7
58,919	+		LRK53_RS00230	0.84	+1.8
58,919	+		LRK53_RS00230	0.84	-1.2
58,919	+		LRK53_RS00230	0.84	+0.6
58,919	+		LRK53_RS00230	0.84	-1.7
58,919	+		LRK53_RS00230	0.84	-0.5
58,919	+		LRK53_RS00230	0.84	-0.4
58,919	+		LRK53_RS00230	0.84	-1.5
58,919	+		LRK53_RS00230	0.84	-0.5
58,920	-		LRK53_RS00230	0.84	-1.4
58,920	-		LRK53_RS00230	0.84	-0.5
58,920	-		LRK53_RS00230	0.84	-1.5
58,920	-		LRK53_RS00230	0.84	+0.1
58,920	-		LRK53_RS00230	0.84	-1.9
58,920	-		LRK53_RS00230	0.84	-1.2
58,920	-		LRK53_RS00230	0.84	+0.9
58,920	-		LRK53_RS00230	0.84	-2.9
58,920	-		LRK53_RS00230	0.84	+0.9
58,920	-		LRK53_RS00230	0.84	-1.1
58,920	-		LRK53_RS00230	0.84	-1.7
58,920	-		LRK53_RS00230	0.84	-1.5
59,150	-				-0.5
59,288	+				+0.1
59,288	+				-0.3
59,288	+				-0.1
59,289	-				-1.0
59,364	+				-1.0
59,364	+				-1.5
59,364	+				-1.6
59,364	+				-0.5
59,364	+				+0.6
59,364	+				-0.7
59,364	+				-0.4
59,365	-				+1.5
59,365	-				+0.8
59,365	-				+0.3
59,365	-				-0.7
59,365	-				-1.1
59,452	-				-1.8
59,452	-				+1.6
59,703	+		LRK53_RS00235	0.26	-2.9
59,703	+		LRK53_RS00235	0.26	+1.9
59,703	+		LRK53_RS00235	0.26	-2.0
59,703	+		LRK53_RS00235	0.26	-0.7
59,703	+		LRK53_RS00235	0.26	-0.8
59,703	+		LRK53_RS00235	0.26	+2.3
59,704	-		LRK53_RS00235	0.26	-1.0
59,704	-		LRK53_RS00235	0.26	-0.8
59,704	-		LRK53_RS00235	0.26	+0.0
59,704	-		LRK53_RS00235	0.26	-0.9
59,704	-		LRK53_RS00235	0.26	-0.7
59,704	-		LRK53_RS00235	0.26	-1.2
59,751	+		LRK53_RS00235	0.33	-0.4
59,752	-		LRK53_RS00235	0.34	-0.0
59,752	-		LRK53_RS00235	0.34	-1.2
59,752	-		LRK53_RS00235	0.34	-1.2
59,752	-		LRK53_RS00235	0.34	-1.3
59,752	-		LRK53_RS00235	0.34	+1.4
59,752	-		LRK53_RS00235	0.34	-0.7
59,752	-		LRK53_RS00235	0.34	+0.1
59,752	-		LRK53_RS00235	0.34	+0.9
59,829	+		LRK53_RS00235	0.46	-0.8
59,829	+		LRK53_RS00235	0.46	-0.8
59,829	+		LRK53_RS00235	0.46	-1.4
59,829	+		LRK53_RS00235	0.46	+0.3
59,829	+		LRK53_RS00235	0.46	-1.8
59,829	+		LRK53_RS00235	0.46	-0.7
59,829	+		LRK53_RS00235	0.46	-0.1
59,829	+		LRK53_RS00235	0.46	-1.9
59,829	+		LRK53_RS00235	0.46	+1.3
59,829	+		LRK53_RS00235	0.46	-0.1
59,829	+		LRK53_RS00235	0.46	-2.5
59,829	+		LRK53_RS00235	0.46	+1.6
59,829	+		LRK53_RS00235	0.46	-0.7
59,829	+		LRK53_RS00235	0.46	+1.1
59,829	+		LRK53_RS00235	0.46	-1.5
59,829	+		LRK53_RS00235	0.46	-1.9
59,829	+		LRK53_RS00235	0.46	-1.5
59,829	+		LRK53_RS00235	0.46	-0.2
59,829	+		LRK53_RS00235	0.46	-1.6
59,829	+		LRK53_RS00235	0.46	+0.1
59,829	+		LRK53_RS00235	0.46	-1.0
59,829	+		LRK53_RS00235	0.46	-0.0
59,829	+		LRK53_RS00235	0.46	+0.1
59,829	+		LRK53_RS00235	0.46	-0.8
59,829	+		LRK53_RS00235	0.46	+0.3
59,829	+		LRK53_RS00235	0.46	+1.1
59,829	+		LRK53_RS00235	0.46	-0.4
59,829	+		LRK53_RS00235	0.46	+0.6
59,829	+		LRK53_RS00235	0.46	+1.3
59,829	+		LRK53_RS00235	0.46	+0.3
59,829	+		LRK53_RS00235	0.46	+0.6
59,829	+		LRK53_RS00235	0.46	-1.1
59,830	-		LRK53_RS00235	0.46	-0.3
59,830	-		LRK53_RS00235	0.46	+0.8
59,830	-		LRK53_RS00235	0.46	-1.0
59,830	-		LRK53_RS00235	0.46	-1.6
59,830	-		LRK53_RS00235	0.46	-2.1
59,830	-		LRK53_RS00235	0.46	-0.2
59,830	-		LRK53_RS00235	0.46	-1.3
59,830	-		LRK53_RS00235	0.46	+1.2
59,830	-		LRK53_RS00235	0.46	+1.3
59,830	-		LRK53_RS00235	0.46	-0.5
59,830	-		LRK53_RS00235	0.46	+0.3
59,830	-		LRK53_RS00235	0.46	-2.2
59,830	-		LRK53_RS00235	0.46	-0.7
59,830	-		LRK53_RS00235	0.46	+1.5
59,830	-		LRK53_RS00235	0.46	+2.6
59,830	-		LRK53_RS00235	0.46	-0.8
59,830	-		LRK53_RS00235	0.46	-0.5
59,830	-		LRK53_RS00235	0.46	-0.4
59,830	-		LRK53_RS00235	0.46	+0.1
59,830	-		LRK53_RS00235	0.46	-2.0
59,830	-		LRK53_RS00235	0.46	-0.1
59,830	-		LRK53_RS00235	0.46	+1.3
59,830	-		LRK53_RS00235	0.46	-1.1
59,838	+		LRK53_RS00235	0.48	-2.2
59,839	-		LRK53_RS00235	0.48	-1.7
60,002	+		LRK53_RS00235	0.75	+1.3
60,003	-		LRK53_RS00235	0.75	+0.3
60,003	-		LRK53_RS00235	0.75	-1.4
60,033	+		LRK53_RS00235	0.80	-2.7
60,033	+		LRK53_RS00235	0.80	-1.2
60,033	+		LRK53_RS00235	0.80	-0.9
60,034	-		LRK53_RS00235	0.80	+1.9
60,034	-		LRK53_RS00235	0.80	-1.2
60,034	-		LRK53_RS00235	0.80	+1.6
60,034	-		LRK53_RS00235	0.80	+0.3
60,034	-		LRK53_RS00235	0.80	-0.7
60,034	-		LRK53_RS00235	0.80	+0.3
60,034	-		LRK53_RS00235	0.80	-0.1
60,043	+		LRK53_RS00235	0.81	-0.5
60,043	+		LRK53_RS00235	0.81	-0.9
60,043	+		LRK53_RS00235	0.81	+0.2
60,043	+		LRK53_RS00235	0.81	-0.3
60,043	+		LRK53_RS00235	0.81	+2.3
60,043	+		LRK53_RS00235	0.81	-0.2
60,043	+		LRK53_RS00235	0.81	-1.3
60,043	+		LRK53_RS00235	0.81	-0.1
60,044	-		LRK53_RS00235	0.81	+1.7
60,044	-		LRK53_RS00235	0.81	+0.3
60,044	-		LRK53_RS00235	0.81	+0.6
60,044	-		LRK53_RS00235	0.81	-1.1
60,168	+				-1.4
60,168	+				+1.3
60,168	+				+0.3
60,169	-				-0.5
60,169	-				+0.2
60,309	+		LRK53_RS00240	0.58	-0.6
60,309	+		LRK53_RS00240	0.58	-1.3
60,309	+		LRK53_RS00240	0.58	+1.2
60,309	+		LRK53_RS00240	0.58	-1.2
60,309	+		LRK53_RS00240	0.58	-1.5
60,310	-		LRK53_RS00240	0.58	-0.4
60,310	-		LRK53_RS00240	0.58	-0.4
60,310	-		LRK53_RS00240	0.58	-0.1
60,310	-		LRK53_RS00240	0.58	-2.1
60,345	+		LRK53_RS00240	0.74	-2.6
60,345	+		LRK53_RS00240	0.74	-1.8
60,345	+		LRK53_RS00240	0.74	-0.7
60,345	+		LRK53_RS00240	0.74	+1.5
60,345	+		LRK53_RS00240	0.74	-0.0
60,345	+		LRK53_RS00240	0.74	+0.9
60,345	+		LRK53_RS00240	0.74	-0.8
60,345	+		LRK53_RS00240	0.74	-0.8
60,345	+		LRK53_RS00240	0.74	-1.2
60,345	+		LRK53_RS00240	0.74	-2.7
60,346	-		LRK53_RS00240	0.75	-0.1
60,346	-		LRK53_RS00240	0.75	-1.1
60,346	-		LRK53_RS00240	0.75	-0.1
60,346	-		LRK53_RS00240	0.75	-0.8
60,346	-		LRK53_RS00240	0.75	-1.8
60,346	-		LRK53_RS00240	0.75	-1.8
60,346	-		LRK53_RS00240	0.75	+0.1
60,346	-		LRK53_RS00240	0.75	-1.1
60,346	-		LRK53_RS00240	0.75	+0.9
60,346	-		LRK53_RS00240	0.75	-0.4
60,408	+				-1.5
60,408	+				-0.3
60,408	+				-0.9
60,408	+				-2.0
60,408	+				+1.2
60,408	+				-1.0
60,408	+				-2.4
60,408	+				-0.2
60,408	+				+0.2
60,408	+				-2.8
60,409	-				-0.9
60,409	-				+0.6
60,409	-				+0.6
60,564	+		LRK53_RS00245	0.17	+0.6
60,565	-		LRK53_RS00245	0.17	-1.2
60,565	-		LRK53_RS00245	0.17	-0.2
60,565	-		LRK53_RS00245	0.17	-0.9
60,620	+		LRK53_RS00245	0.24	-2.5
60,620	+		LRK53_RS00245	0.24	-1.2
60,620	+		LRK53_RS00245	0.24	-1.3
60,620	+		LRK53_RS00245	0.24	-1.5
60,620	+		LRK53_RS00245	0.24	+0.4
60,620	+		LRK53_RS00245	0.24	-0.2
60,620	+		LRK53_RS00245	0.24	+0.6
60,621	-		LRK53_RS00245	0.24	+0.0
60,621	-		LRK53_RS00245	0.24	+0.9
60,621	-		LRK53_RS00245	0.24	-0.9
60,621	-		LRK53_RS00245	0.24	+0.8
60,621	-		LRK53_RS00245	0.24	+0.2
60,621	-		LRK53_RS00245	0.24	+0.9
60,621	-		LRK53_RS00245	0.24	-2.7
60,621	-		LRK53_RS00245	0.24	-0.1
60,881	+		LRK53_RS00245	0.56	-1.9
60,881	+		LRK53_RS00245	0.56	-0.2
60,882	-		LRK53_RS00245	0.56	+0.6
60,882	-		LRK53_RS00245	0.56	-1.3
60,989	+		LRK53_RS00245	0.69	-0.3
60,989	+		LRK53_RS00245	0.69	-1.2
60,989	+		LRK53_RS00245	0.69	-2.7
60,989	+		LRK53_RS00245	0.69	+0.9
60,989	+		LRK53_RS00245	0.69	-2.0
60,989	+		LRK53_RS00245	0.69	+1.3
60,990	-		LRK53_RS00245	0.69	-0.5
60,990	-		LRK53_RS00245	0.69	-0.9
60,990	-		LRK53_RS00245	0.69	+0.5
60,990	-		LRK53_RS00245	0.69	-0.1