Strain Fitness in Paraburkholderia sabiae LMG 24235 around QEN71_RS27995

Experiment: casaminos (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	casaminos (C)
6,221,896	+		QEN71_RS27990	0.50	+0.9
6,222,020	+		QEN71_RS27990	0.59	+0.0
6,222,021	-		QEN71_RS27990	0.59	+1.6
6,222,021	-		QEN71_RS27990	0.59	+0.1
6,222,021	-		QEN71_RS27990	0.59	-0.6
6,222,578	+				-0.3
6,222,578	+				+0.0
6,222,578	+				-1.0
6,222,578	+				-2.2
6,222,578	+				-1.0
6,222,579	-				-0.7
6,222,579	-				+0.1
6,222,581	+				-0.7
6,222,581	+				+0.6
6,222,581	+				-0.1
6,222,582	-				-1.0
6,222,582	-				-0.4
6,222,602	+				-0.4
6,222,602	+				-0.5
6,222,602	+				-0.6
6,222,603	-				-0.2
6,222,603	-				+0.1
6,222,629	-				-0.2
6,222,644	+				-0.6
6,222,644	+				-0.4
6,222,644	+				+0.9
6,222,644	+				-0.5
6,222,644	+				-0.7
6,222,644	+				+0.3
6,222,644	+				+0.9
6,222,644	+				+0.0
6,222,644	+				-1.2
6,222,644	+				+1.9
6,222,644	+				-0.4
6,222,644	+				+0.1
6,222,645	-				-0.5
6,222,645	-				-0.3
6,222,645	-				-0.4
6,222,645	-				-2.5
6,222,645	-				+0.6
6,222,645	-				-1.2
6,222,645	-				-0.0
6,222,645	-				+0.1
6,222,645	-				-0.2
6,222,645	-				-0.8
6,222,645	-				-0.9
6,222,645	-				-1.2
6,222,645	-				-1.8
6,222,645	-				-0.6
6,222,645	-				-1.9
6,222,646	+				-0.8
6,222,646	+				-0.4
6,222,646	+				-0.1
6,222,646	+				+0.3
6,222,646	+				-0.3
6,222,646	+				+0.6
6,222,647	-				+0.1
6,222,647	-				+0.4
6,222,647	-				+0.1
6,222,801	+				+0.9
6,222,819	+				+1.1
6,222,819	+				+0.1
6,222,819	+				-0.7
6,222,820	-				+0.3
6,222,855	+		QEN71_RS27995	0.13	-0.5
6,222,855	+		QEN71_RS27995	0.13	+1.1
6,222,855	+		QEN71_RS27995	0.13	+0.7
6,222,855	+		QEN71_RS27995	0.13	+0.4
6,222,855	+		QEN71_RS27995	0.13	+1.6
6,222,855	+		QEN71_RS27995	0.13	-0.8
6,222,856	-		QEN71_RS27995	0.13	+1.1
6,222,856	-		QEN71_RS27995	0.13	-0.6
6,222,856	-		QEN71_RS27995	0.13	-1.2
6,222,957	+		QEN71_RS27995	0.23	-0.3
6,222,957	+		QEN71_RS27995	0.23	+0.2
6,222,957	+		QEN71_RS27995	0.23	+0.8
6,222,957	+		QEN71_RS27995	0.23	-0.6
6,222,957	+		QEN71_RS27995	0.23	+0.3
6,222,957	+		QEN71_RS27995	0.23	+0.3
6,222,958	-		QEN71_RS27995	0.23	+1.1
6,222,958	-		QEN71_RS27995	0.23	+0.0
6,222,958	-		QEN71_RS27995	0.23	-0.4
6,222,958	-		QEN71_RS27995	0.23	+0.0
6,222,958	-		QEN71_RS27995	0.23	-1.1
6,222,958	-		QEN71_RS27995	0.23	-0.2
6,222,958	-		QEN71_RS27995	0.23	+0.9
6,222,975	+		QEN71_RS27995	0.25	+1.4
6,222,975	+		QEN71_RS27995	0.25	-1.8
6,222,975	+		QEN71_RS27995	0.25	-0.2
6,222,975	+		QEN71_RS27995	0.25	+0.3
6,222,975	+		QEN71_RS27995	0.25	-0.2
6,222,975	+		QEN71_RS27995	0.25	+0.9
6,222,975	+		QEN71_RS27995	0.25	-0.1
6,222,975	+		QEN71_RS27995	0.25	-1.1
6,222,975	+		QEN71_RS27995	0.25	+0.4
6,222,975	+		QEN71_RS27995	0.25	+0.6
6,222,976	-		QEN71_RS27995	0.25	-1.9
6,222,976	-		QEN71_RS27995	0.25	-0.6
6,222,976	-		QEN71_RS27995	0.25	+2.2
6,222,976	-		QEN71_RS27995	0.25	+0.1
6,223,146	+		QEN71_RS27995	0.43	+0.6
6,223,146	+		QEN71_RS27995	0.43	-0.6
6,223,146	+		QEN71_RS27995	0.43	+0.0
6,223,146	+		QEN71_RS27995	0.43	+0.4
6,223,146	+		QEN71_RS27995	0.43	-1.2
6,223,146	+		QEN71_RS27995	0.43	-0.4
6,223,146	+		QEN71_RS27995	0.43	-1.5
6,223,146	+		QEN71_RS27995	0.43	+0.0
6,223,147	-		QEN71_RS27995	0.43	-0.9
6,223,147	-		QEN71_RS27995	0.43	+0.9
6,223,245	+		QEN71_RS27995	0.53	+0.1
6,223,245	+		QEN71_RS27995	0.53	+0.0
6,223,246	-		QEN71_RS27995	0.53	+0.0
6,223,246	-		QEN71_RS27995	0.53	+1.6
6,223,553	+		QEN71_RS27995	0.85	+0.1
6,223,554	-		QEN71_RS27995	0.85	-1.3
6,223,660	+				-0.9
6,223,661	-				+0.3
6,223,710	+				-0.2
6,223,710	+				+0.2
6,223,711	-				+0.2
6,223,711	-				+0.5
6,223,796	+				+0.7
6,223,796	+				-2.8
6,223,796	+				+0.2
6,223,797	-				-0.8
6,223,797	-				-0.4
6,223,797	-				+0.9
6,223,816	+				-0.0
6,223,816	+				-0.3
6,223,816	+				-0.8
6,223,816	+				+0.3
6,223,816	+				-1.0
6,223,816	+				+0.2
6,223,816	+				+0.6
6,223,817	-				+1.0
6,223,817	-				-1.0
6,223,817	-				+0.9
6,223,817	-				+0.5
6,223,848	+				+0.6
6,223,849	-				+0.2
6,223,849	-				+1.3
6,223,849	-				-0.8
6,223,871	+				+0.1
6,223,872	-				+1.2
6,223,872	-				-0.0
6,223,872	-				+0.3
6,223,936	+				-1.8
6,223,936	+				+2.1
6,223,936	+				-1.4
6,223,936	+				+1.1
6,223,936	+				-0.8
6,223,936	+				+0.2
6,223,936	+				+1.6
6,223,936	+				-0.5
6,223,936	+				-1.1
6,223,937	-				-0.6
6,223,937	-				-0.5
6,223,937	-				+1.6
6,223,977	-				-0.9
6,224,007	-				-1.7
6,224,007	-				+0.2
6,224,039	+		QEN71_RS28000	0.11	-1.0
6,224,039	+		QEN71_RS28000	0.11	-0.9
6,224,040	-		QEN71_RS28000	0.11	-0.1
6,224,040	-		QEN71_RS28000	0.11	-0.7
6,224,040	-		QEN71_RS28000	0.11	+0.2
6,224,040	-		QEN71_RS28000	0.11	-0.2
6,224,040	-		QEN71_RS28000	0.11	+0.6
6,224,040	-		QEN71_RS28000	0.11	+1.2
6,224,040	-		QEN71_RS28000	0.11	+0.0
6,224,374	-		QEN71_RS28000	0.63	+1.4
6,224,402	+		QEN71_RS28000	0.67	+1.4
6,224,495	+		QEN71_RS28000	0.82	+0.1
6,224,495	+		QEN71_RS28000	0.82	-0.2
6,224,495	+		QEN71_RS28000	0.82	+0.0
6,224,496	-		QEN71_RS28000	0.82	+0.2
6,224,496	-		QEN71_RS28000	0.82	-0.0
6,224,496	-		QEN71_RS28000	0.82	+0.3
6,224,496	-		QEN71_RS28000	0.82	-3.2
6,224,620	+				+0.5
6,224,620	+				-0.5
6,224,621	-				-0.4
6,224,621	-				-0.2
6,224,621	-				-1.2
6,224,621	-				-0.5
6,224,621	-				-0.3
6,224,621	-				-0.8
6,224,658	-				-0.2