Experiment: D-Fructose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS08215 and QEN71_RS08220 are separated by 19 nucleotides QEN71_RS08220 and QEN71_RS08225 are separated by 180 nucleotides QEN71_RS08225 and QEN71_RS08230 are separated by 40 nucleotides
QEN71_RS08215: QEN71_RS08215 - DUF1254 domain-containing protein, at 1,820,157 to 1,821,626
_RS08215
QEN71_RS08220: QEN71_RS08220 - LuxR C-terminal-related transcriptional regulator, at 1,821,646 to 1,824,348
_RS08220
QEN71_RS08225: QEN71_RS08225 - enoyl-CoA hydratase/isomerase family protein, at 1,824,529 to 1,825,299
_RS08225
QEN71_RS08230: QEN71_RS08230 - thiolase family protein, at 1,825,340 to 1,826,581
_RS08230
Position (kb)
1821
1822
1823
1824
1825 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1820.661 kb on + strand, within QEN71_RS08215 at 1820.661 kb on + strand, within QEN71_RS08215 at 1820.661 kb on + strand, within QEN71_RS08215 at 1820.662 kb on - strand, within QEN71_RS08215 at 1820.729 kb on + strand, within QEN71_RS08215 at 1820.729 kb on + strand, within QEN71_RS08215 at 1820.730 kb on - strand, within QEN71_RS08215 at 1821.189 kb on + strand, within QEN71_RS08215 at 1821.252 kb on + strand, within QEN71_RS08215 at 1821.252 kb on + strand, within QEN71_RS08215 at 1821.255 kb on + strand, within QEN71_RS08215 at 1821.255 kb on + strand, within QEN71_RS08215 at 1821.429 kb on - strand, within QEN71_RS08215 at 1821.444 kb on + strand, within QEN71_RS08215 at 1821.444 kb on + strand, within QEN71_RS08215 at 1821.445 kb on - strand, within QEN71_RS08215 at 1821.445 kb on - strand, within QEN71_RS08215 at 1821.471 kb on + strand, within QEN71_RS08215 at 1821.472 kb on - strand, within QEN71_RS08215 at 1821.610 kb on + strand at 1821.647 kb on + strand at 1821.647 kb on + strand at 1821.647 kb on + strand at 1821.721 kb on - strand at 1821.932 kb on + strand, within QEN71_RS08220 at 1822.018 kb on - strand, within QEN71_RS08220 at 1822.589 kb on + strand, within QEN71_RS08220 at 1822.862 kb on + strand, within QEN71_RS08220 at 1822.863 kb on - strand, within QEN71_RS08220 at 1822.863 kb on - strand, within QEN71_RS08220 at 1823.153 kb on + strand, within QEN71_RS08220 at 1823.153 kb on + strand, within QEN71_RS08220 at 1823.334 kb on + strand, within QEN71_RS08220 at 1823.564 kb on + strand, within QEN71_RS08220 at 1823.591 kb on - strand, within QEN71_RS08220 at 1823.933 kb on + strand, within QEN71_RS08220 at 1823.934 kb on - strand, within QEN71_RS08220 at 1823.952 kb on - strand, within QEN71_RS08220 at 1823.952 kb on - strand, within QEN71_RS08220 at 1823.952 kb on - strand, within QEN71_RS08220 at 1824.391 kb on + strand at 1824.454 kb on + strand at 1824.455 kb on - strand at 1824.455 kb on - strand at 1824.459 kb on - strand at 1824.459 kb on - strand at 1824.463 kb on + strand at 1824.464 kb on - strand at 1824.473 kb on + strand at 1825.235 kb on - strand at 1825.334 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Fructose (C) remove 1,820,661 + QEN71_RS08215 0.34 -0.1 1,820,661 + QEN71_RS08215 0.34 -0.7 1,820,661 + QEN71_RS08215 0.34 -1.1 1,820,662 - QEN71_RS08215 0.34 +0.7 1,820,729 + QEN71_RS08215 0.39 +0.4 1,820,729 + QEN71_RS08215 0.39 +0.0 1,820,730 - QEN71_RS08215 0.39 -0.4 1,821,189 + QEN71_RS08215 0.70 -0.6 1,821,252 + QEN71_RS08215 0.74 -0.7 1,821,252 + QEN71_RS08215 0.74 +0.3 1,821,255 + QEN71_RS08215 0.75 +0.9 1,821,255 + QEN71_RS08215 0.75 +0.9 1,821,429 - QEN71_RS08215 0.87 +0.6 1,821,444 + QEN71_RS08215 0.88 -1.0 1,821,444 + QEN71_RS08215 0.88 +0.4 1,821,445 - QEN71_RS08215 0.88 +0.1 1,821,445 - QEN71_RS08215 0.88 +0.3 1,821,471 + QEN71_RS08215 0.89 +0.4 1,821,472 - QEN71_RS08215 0.89 -1.0 1,821,610 + -0.1 1,821,647 + -1.1 1,821,647 + -1.5 1,821,647 + +0.2 1,821,721 - +2.8 1,821,932 + QEN71_RS08220 0.11 +0.3 1,822,018 - QEN71_RS08220 0.14 +0.1 1,822,589 + QEN71_RS08220 0.35 -0.4 1,822,862 + QEN71_RS08220 0.45 -1.3 1,822,863 - QEN71_RS08220 0.45 -0.4 1,822,863 - QEN71_RS08220 0.45 +1.2 1,823,153 + QEN71_RS08220 0.56 +0.3 1,823,153 + QEN71_RS08220 0.56 -1.4 1,823,334 + QEN71_RS08220 0.62 -0.5 1,823,564 + QEN71_RS08220 0.71 +0.1 1,823,591 - QEN71_RS08220 0.72 -2.4 1,823,933 + QEN71_RS08220 0.85 -1.7 1,823,934 - QEN71_RS08220 0.85 +0.5 1,823,952 - QEN71_RS08220 0.85 -0.7 1,823,952 - QEN71_RS08220 0.85 +1.0 1,823,952 - QEN71_RS08220 0.85 +0.1 1,824,391 + -0.9 1,824,454 + -0.8 1,824,455 - +1.9 1,824,455 - +0.4 1,824,459 - +0.6 1,824,459 - -0.1 1,824,463 + -0.1 1,824,464 - -0.4 1,824,473 + +1.2 1,825,235 - +0.2 1,825,334 - -0.0
Or see this region's nucleotide sequence