Strain Fitness in Paraburkholderia sabiae LMG 24235 around QEN71_RS01425

Experiment: D-Fructose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntQEN71_RS01415 and QEN71_RS01420 are separated by 280 nucleotidesQEN71_RS01420 and QEN71_RS01425 are separated by 59 nucleotidesQEN71_RS01425 and QEN71_RS01430 are separated by 219 nucleotides QEN71_RS01415: QEN71_RS01415 - glutathione synthase, at 318,492 to 319,448 _RS01415 QEN71_RS01420: QEN71_RS01420 - PTS sugar transporter subunit IIB, at 319,729 to 320,241 _RS01420 QEN71_RS01425: QEN71_RS01425 - HPr family phosphocarrier protein, at 320,301 to 320,570 _RS01425 QEN71_RS01430: QEN71_RS01430 - phosphoenolpyruvate--protein phosphotransferase, at 320,790 to 322,532 _RS01430 Position (kb) 320 321Strain fitness (log2 ratio) -3 -2 -1 0 1at 319.429 kb on + strandat 319.429 kb on + strandat 319.429 kb on + strandat 319.429 kb on + strandat 319.429 kb on + strandat 319.430 kb on - strandat 319.430 kb on - strandat 319.541 kb on + strandat 319.541 kb on + strandat 319.541 kb on + strandat 319.541 kb on + strandat 319.541 kb on + strandat 319.541 kb on + strandat 319.541 kb on + strandat 319.541 kb on + strandat 319.541 kb on + strandat 319.541 kb on + strandat 319.541 kb on + strandat 319.541 kb on + strandat 319.541 kb on + strandat 319.541 kb on + strandat 319.542 kb on - strandat 319.542 kb on - strandat 319.542 kb on - strandat 319.542 kb on - strandat 319.542 kb on - strandat 319.542 kb on - strandat 319.542 kb on - strandat 319.542 kb on - strandat 319.542 kb on - strandat 319.542 kb on - strandat 319.542 kb on - strandat 319.542 kb on - strandat 319.542 kb on - strandat 319.542 kb on - strandat 319.542 kb on - strandat 319.542 kb on - strandat 319.542 kb on - strandat 319.542 kb on - strandat 319.569 kb on + strandat 319.569 kb on + strandat 319.570 kb on - strandat 319.678 kb on + strandat 319.678 kb on + strandat 319.678 kb on + strandat 319.678 kb on + strandat 319.679 kb on - strandat 319.679 kb on - strandat 319.679 kb on - strandat 319.679 kb on - strandat 319.679 kb on - strandat 319.795 kb on - strand, within QEN71_RS01420at 319.795 kb on - strand, within QEN71_RS01420at 319.795 kb on - strand, within QEN71_RS01420at 319.799 kb on - strand, within QEN71_RS01420at 320.036 kb on - strand, within QEN71_RS01420at 320.157 kb on + strand, within QEN71_RS01420at 320.157 kb on + strand, within QEN71_RS01420at 320.157 kb on + strand, within QEN71_RS01420at 320.157 kb on + strand, within QEN71_RS01420at 320.157 kb on + strand, within QEN71_RS01420at 320.157 kb on + strand, within QEN71_RS01420at 320.157 kb on + strand, within QEN71_RS01420at 320.157 kb on + strand, within QEN71_RS01420at 320.158 kb on - strand, within QEN71_RS01420at 320.158 kb on - strand, within QEN71_RS01420at 320.158 kb on - strand, within QEN71_RS01420at 320.271 kb on + strandat 320.321 kb on + strandat 320.381 kb on + strand, within QEN71_RS01425at 320.568 kb on + strandat 320.568 kb on + strandat 320.568 kb on + strandat 320.568 kb on + strandat 320.569 kb on - strandat 320.569 kb on - strandat 320.569 kb on - strandat 320.659 kb on + strandat 320.659 kb on + strandat 320.660 kb on - strandat 320.660 kb on - strandat 320.660 kb on - strandat 320.660 kb on - strandat 320.660 kb on - strandat 320.660 kb on - strandat 320.660 kb on - strandat 320.660 kb on - strandat 320.705 kb on + strandat 320.705 kb on + strandat 320.705 kb on + strandat 320.705 kb on + strandat 320.706 kb on - strandat 320.706 kb on - strandat 320.719 kb on + strandat 320.719 kb on + strandat 320.719 kb on + strandat 320.719 kb on + strandat 320.719 kb on + strandat 320.719 kb on + strandat 320.719 kb on + strandat 320.719 kb on + strandat 320.719 kb on + strandat 320.720 kb on - strandat 320.720 kb on - strandat 320.720 kb on - strandat 320.720 kb on - strandat 320.720 kb on - strandat 320.720 kb on - strandat 320.720 kb on - strandat 320.720 kb on - strandat 320.720 kb on - strandat 320.721 kb on + strandat 320.776 kb on + strandat 320.776 kb on + strandat 320.776 kb on + strandat 320.776 kb on + strandat 320.776 kb on + strandat 320.776 kb on + strandat 320.776 kb on + strandat 320.776 kb on + strandat 320.776 kb on + strandat 320.776 kb on + strandat 320.776 kb on + strandat 320.776 kb on + strandat 320.776 kb on + strandat 320.776 kb on + strandat 320.776 kb on + strandat 320.777 kb on - strandat 320.777 kb on - strandat 320.777 kb on - strandat 320.777 kb on - strandat 320.847 kb on + strandat 320.847 kb on + strandat 320.848 kb on - strandat 320.884 kb on - strandat 320.884 kb on - strandat 321.091 kb on - strand, within QEN71_RS01430at 321.162 kb on + strand, within QEN71_RS01430at 321.163 kb on - strand, within QEN71_RS01430at 321.163 kb on - strand, within QEN71_RS01430at 321.176 kb on + strand, within QEN71_RS01430at 321.176 kb on + strand, within QEN71_RS01430at 321.177 kb on - strand, within QEN71_RS01430at 321.522 kb on + strand, within QEN71_RS01430at 321.523 kb on - strand, within QEN71_RS01430at 321.523 kb on - strand, within QEN71_RS01430

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Fructose (C)
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319,429 + -0.3
319,429 + -1.9
319,429 + -0.5
319,429 + -1.0
319,429 + +1.0
319,430 - +0.5
319,430 - -1.1
319,541 + -0.0
319,541 + -1.4
319,541 + +1.0
319,541 + +0.7
319,541 + -1.3
319,541 + -0.7
319,541 + +0.2
319,541 + -1.9
319,541 + -1.9
319,541 + -0.0
319,541 + +0.0
319,541 + -0.2
319,541 + +0.0
319,541 + +0.0
319,542 - -0.4
319,542 - -0.2
319,542 - +0.3
319,542 - -0.0
319,542 - -0.3
319,542 - +0.0
319,542 - -1.9
319,542 - -1.3
319,542 - +0.3
319,542 - -1.5
319,542 - -1.5
319,542 - +0.3
319,542 - -0.9
319,542 - -0.2
319,542 - +1.0
319,542 - -0.0
319,542 - +0.1
319,542 - +0.7
319,569 + -0.8
319,569 + -0.9
319,570 - -2.6
319,678 + +0.0
319,678 + -2.7
319,678 + -0.4
319,678 + -1.2
319,679 - -1.8
319,679 - -3.4
319,679 - -2.1
319,679 - -2.6
319,679 - -3.4
319,795 - QEN71_RS01420 0.13 -2.3
319,795 - QEN71_RS01420 0.13 +0.6
319,795 - QEN71_RS01420 0.13 -2.7
319,799 - QEN71_RS01420 0.14 -1.8
320,036 - QEN71_RS01420 0.60 -2.9
320,157 + QEN71_RS01420 0.83 -1.0
320,157 + QEN71_RS01420 0.83 -0.5
320,157 + QEN71_RS01420 0.83 -0.8
320,157 + QEN71_RS01420 0.83 -1.5
320,157 + QEN71_RS01420 0.83 -1.0
320,157 + QEN71_RS01420 0.83 +0.6
320,157 + QEN71_RS01420 0.83 -1.0
320,157 + QEN71_RS01420 0.83 -0.2
320,158 - QEN71_RS01420 0.84 -2.8
320,158 - QEN71_RS01420 0.84 -2.6
320,158 - QEN71_RS01420 0.84 -2.6
320,271 + -0.8
320,321 + -0.0
320,381 + QEN71_RS01425 0.30 +1.0
320,568 + -0.7
320,568 + -0.3
320,568 + -0.9
320,568 + +0.2
320,569 - -1.5
320,569 - -0.4
320,569 - -1.7
320,659 + -1.7
320,659 + -2.4
320,660 - +0.2
320,660 - +1.1
320,660 - +0.3
320,660 - -0.0
320,660 - -0.5
320,660 - +0.2
320,660 - -0.5
320,660 - -0.1
320,705 + -1.8
320,705 + -1.0
320,705 + -0.8
320,705 + -1.3
320,706 - +0.5
320,706 - -1.0
320,719 + -1.1
320,719 + -0.3
320,719 + -0.1
320,719 + -0.7
320,719 + -1.2
320,719 + -1.0
320,719 + -1.4
320,719 + -1.3
320,719 + -2.3
320,720 - -0.1
320,720 - -0.8
320,720 - -1.2
320,720 - -0.3
320,720 - -0.3
320,720 - -0.7
320,720 - -0.1
320,720 - -0.4
320,720 - -0.3
320,721 + -0.1
320,776 + +0.1
320,776 + +0.3
320,776 + -1.1
320,776 + -1.2
320,776 + -0.9
320,776 + -1.6
320,776 + -1.7
320,776 + -1.5
320,776 + -2.2
320,776 + -2.2
320,776 + -0.3
320,776 + -1.0
320,776 + -1.4
320,776 + -1.5
320,776 + -1.9
320,777 - -0.3
320,777 - -1.7
320,777 - -1.2
320,777 - -0.1
320,847 + -1.2
320,847 + -0.0
320,848 - -0.6
320,884 - -0.0
320,884 - -0.6
321,091 - QEN71_RS01430 0.17 -0.8
321,162 + QEN71_RS01430 0.21 -0.0
321,163 - QEN71_RS01430 0.21 -0.3
321,163 - QEN71_RS01430 0.21 -0.0
321,176 + QEN71_RS01430 0.22 -0.3
321,176 + QEN71_RS01430 0.22 -0.0
321,177 - QEN71_RS01430 0.22 -0.6
321,522 + QEN71_RS01430 0.42 -0.8
321,523 - QEN71_RS01430 0.42 -0.0
321,523 - QEN71_RS01430 0.42 -0.3

Or see this region's nucleotide sequence