Experiment: D-Fructose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS00245 and QEN71_RS00250 are separated by 380 nucleotides QEN71_RS00250 and QEN71_RS00255 are separated by 165 nucleotides
QEN71_RS00245: QEN71_RS00245 - rod shape-determining protein, at 51,477 to 52,520
_RS00245
QEN71_RS00250: QEN71_RS00250 - Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC, at 52,901 to 53,200
_RS00250
QEN71_RS00255: QEN71_RS00255 - Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA, at 53,366 to 54,859
_RS00255
Position (kb)
52
53
54 Strain fitness (log2 ratio)
-2
-1
0
1 at 52.657 kb on - strand at 52.657 kb on - strand at 52.657 kb on - strand at 52.659 kb on - strand at 52.659 kb on - strand at 52.659 kb on - strand at 52.659 kb on - strand at 52.659 kb on - strand at 52.659 kb on - strand at 52.659 kb on - strand at 52.659 kb on - strand at 52.659 kb on - strand at 52.659 kb on - strand at 52.716 kb on - strand at 52.716 kb on - strand at 52.756 kb on - strand at 52.756 kb on - strand at 52.756 kb on - strand at 52.756 kb on - strand at 52.757 kb on + strand at 52.757 kb on + strand at 52.757 kb on + strand at 52.837 kb on + strand at 52.837 kb on + strand at 52.837 kb on + strand at 53.198 kb on + strand at 53.216 kb on + strand at 53.216 kb on + strand at 53.216 kb on + strand at 53.216 kb on + strand at 53.216 kb on + strand at 53.220 kb on + strand at 53.220 kb on + strand at 53.220 kb on + strand at 53.220 kb on + strand at 53.220 kb on + strand at 53.220 kb on + strand at 53.273 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Fructose (C) remove 52,657 - +0.3 52,657 - -0.6 52,657 - +0.4 52,659 - -0.8 52,659 - -1.5 52,659 - -0.1 52,659 - -0.7 52,659 - -1.0 52,659 - -0.8 52,659 - +0.1 52,659 - -0.2 52,659 - -0.6 52,659 - -0.6 52,716 - -2.6 52,716 - -0.6 52,756 - +1.1 52,756 - +1.0 52,756 - +0.8 52,756 - -0.2 52,757 + -0.0 52,757 + -0.5 52,757 + -2.2 52,837 + -1.3 52,837 + -0.4 52,837 + -1.9 53,198 + -0.5 53,216 + -0.4 53,216 + +0.8 53,216 + -0.2 53,216 + -1.7 53,216 + +0.9 53,220 + -0.4 53,220 + +0.7 53,220 + -0.6 53,220 + -0.8 53,220 + -1.5 53,220 + -0.8 53,273 + -1.0
Or see this region's nucleotide sequence