Experiment: L-Histidine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS25140 and QEN71_RS25145 are separated by 6 nucleotides QEN71_RS25145 and QEN71_RS25150 are separated by 560 nucleotides QEN71_RS25150 and QEN71_RS25155 overlap by 4 nucleotides
QEN71_RS25140: QEN71_RS25140 - iron ABC transporter permease, at 5,595,462 to 5,596,511
_RS25140
QEN71_RS25145: QEN71_RS25145 - TonB-dependent receptor, at 5,596,518 to 5,598,473
_RS25145
QEN71_RS25150: QEN71_RS25150 - ATPase, at 5,599,034 to 5,599,396
_RS25150
QEN71_RS25155: QEN71_RS25155 - cell division protein ZapA, at 5,599,393 to 5,599,707
_RS25155
Position (kb) 5596
5597
5598
5599 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5595.739 kb on + strand, within QEN71_RS25140 at 5595.739 kb on + strand, within QEN71_RS25140 at 5595.739 kb on + strand, within QEN71_RS25140 at 5595.740 kb on - strand, within QEN71_RS25140 at 5595.740 kb on - strand, within QEN71_RS25140 at 5595.740 kb on - strand, within QEN71_RS25140 at 5596.189 kb on + strand, within QEN71_RS25140 at 5596.189 kb on + strand, within QEN71_RS25140 at 5596.189 kb on + strand, within QEN71_RS25140 at 5596.189 kb on + strand, within QEN71_RS25140 at 5596.189 kb on + strand, within QEN71_RS25140 at 5596.189 kb on + strand, within QEN71_RS25140 at 5596.189 kb on + strand, within QEN71_RS25140 at 5596.190 kb on - strand, within QEN71_RS25140 at 5596.190 kb on - strand, within QEN71_RS25140 at 5596.190 kb on - strand, within QEN71_RS25140 at 5596.190 kb on - strand, within QEN71_RS25140 at 5596.190 kb on - strand, within QEN71_RS25140 at 5596.190 kb on - strand, within QEN71_RS25140 at 5596.546 kb on + strand at 5596.546 kb on + strand at 5596.546 kb on + strand at 5596.547 kb on - strand at 5596.547 kb on - strand at 5596.547 kb on - strand at 5596.547 kb on - strand at 5596.547 kb on - strand at 5596.570 kb on + strand at 5596.570 kb on + strand at 5596.570 kb on + strand at 5596.570 kb on + strand at 5596.570 kb on + strand at 5596.570 kb on + strand at 5596.570 kb on + strand at 5596.570 kb on + strand at 5596.570 kb on + strand at 5596.571 kb on - strand at 5596.571 kb on - strand at 5596.571 kb on - strand at 5596.571 kb on - strand at 5596.577 kb on - strand at 5596.577 kb on - strand at 5596.627 kb on + strand at 5596.627 kb on + strand at 5596.627 kb on + strand at 5596.628 kb on - strand at 5596.628 kb on - strand at 5596.648 kb on + strand at 5596.649 kb on - strand at 5596.806 kb on - strand, within QEN71_RS25145 at 5596.806 kb on - strand, within QEN71_RS25145 at 5596.806 kb on - strand, within QEN71_RS25145 at 5596.806 kb on - strand, within QEN71_RS25145 at 5596.930 kb on + strand, within QEN71_RS25145 at 5596.930 kb on + strand, within QEN71_RS25145 at 5596.931 kb on - strand, within QEN71_RS25145 at 5596.931 kb on - strand, within QEN71_RS25145 at 5596.931 kb on - strand, within QEN71_RS25145 at 5596.931 kb on - strand, within QEN71_RS25145 at 5596.931 kb on - strand, within QEN71_RS25145 at 5596.954 kb on + strand, within QEN71_RS25145 at 5596.954 kb on + strand, within QEN71_RS25145 at 5596.954 kb on + strand, within QEN71_RS25145 at 5596.955 kb on - strand, within QEN71_RS25145 at 5596.955 kb on - strand, within QEN71_RS25145 at 5596.955 kb on - strand, within QEN71_RS25145 at 5596.970 kb on + strand, within QEN71_RS25145 at 5596.970 kb on + strand, within QEN71_RS25145 at 5596.970 kb on + strand, within QEN71_RS25145 at 5596.970 kb on + strand, within QEN71_RS25145 at 5596.970 kb on + strand, within QEN71_RS25145 at 5596.970 kb on + strand, within QEN71_RS25145 at 5596.971 kb on - strand, within QEN71_RS25145 at 5596.971 kb on - strand, within QEN71_RS25145 at 5596.971 kb on - strand, within QEN71_RS25145 at 5596.971 kb on - strand, within QEN71_RS25145 at 5596.971 kb on - strand, within QEN71_RS25145 at 5596.971 kb on - strand, within QEN71_RS25145 at 5596.971 kb on - strand, within QEN71_RS25145 at 5597.023 kb on + strand, within QEN71_RS25145 at 5597.023 kb on + strand, within QEN71_RS25145 at 5597.083 kb on + strand, within QEN71_RS25145 at 5597.084 kb on - strand, within QEN71_RS25145 at 5597.084 kb on - strand, within QEN71_RS25145 at 5597.089 kb on + strand, within QEN71_RS25145 at 5597.089 kb on + strand, within QEN71_RS25145 at 5597.090 kb on - strand, within QEN71_RS25145 at 5597.090 kb on - strand, within QEN71_RS25145 at 5597.092 kb on + strand, within QEN71_RS25145 at 5597.092 kb on + strand, within QEN71_RS25145 at 5597.092 kb on + strand, within QEN71_RS25145 at 5597.092 kb on + strand, within QEN71_RS25145 at 5597.092 kb on + strand, within QEN71_RS25145 at 5597.092 kb on + strand, within QEN71_RS25145 at 5597.093 kb on - strand, within QEN71_RS25145 at 5597.093 kb on - strand, within QEN71_RS25145 at 5597.093 kb on - strand, within QEN71_RS25145 at 5597.093 kb on - strand, within QEN71_RS25145 at 5597.093 kb on - strand, within QEN71_RS25145 at 5597.167 kb on + strand, within QEN71_RS25145 at 5597.168 kb on - strand, within QEN71_RS25145 at 5597.173 kb on + strand, within QEN71_RS25145 at 5597.173 kb on + strand, within QEN71_RS25145 at 5597.182 kb on + strand, within QEN71_RS25145 at 5597.182 kb on + strand, within QEN71_RS25145 at 5597.182 kb on + strand, within QEN71_RS25145 at 5597.182 kb on + strand, within QEN71_RS25145 at 5597.182 kb on + strand, within QEN71_RS25145 at 5597.182 kb on + strand, within QEN71_RS25145 at 5597.182 kb on + strand, within QEN71_RS25145 at 5597.183 kb on - strand, within QEN71_RS25145 at 5597.183 kb on - strand, within QEN71_RS25145 at 5597.183 kb on - strand, within QEN71_RS25145 at 5597.183 kb on - strand, within QEN71_RS25145 at 5597.183 kb on - strand, within QEN71_RS25145 at 5597.183 kb on - strand, within QEN71_RS25145 at 5597.183 kb on - strand, within QEN71_RS25145 at 5597.183 kb on - strand, within QEN71_RS25145 at 5597.183 kb on - strand, within QEN71_RS25145 at 5597.183 kb on - strand, within QEN71_RS25145 at 5597.185 kb on + strand, within QEN71_RS25145 at 5597.185 kb on + strand, within QEN71_RS25145 at 5597.185 kb on + strand, within QEN71_RS25145 at 5597.185 kb on + strand, within QEN71_RS25145 at 5597.185 kb on + strand, within QEN71_RS25145 at 5597.185 kb on + strand, within QEN71_RS25145 at 5597.185 kb on + strand, within QEN71_RS25145 at 5597.186 kb on - strand, within QEN71_RS25145 at 5597.186 kb on - strand, within QEN71_RS25145 at 5597.186 kb on - strand, within QEN71_RS25145 at 5597.186 kb on - strand, within QEN71_RS25145 at 5597.186 kb on - strand, within QEN71_RS25145 at 5597.186 kb on - strand, within QEN71_RS25145 at 5597.186 kb on - strand, within QEN71_RS25145 at 5597.213 kb on - strand, within QEN71_RS25145 at 5597.267 kb on - strand, within QEN71_RS25145 at 5597.267 kb on - strand, within QEN71_RS25145 at 5597.308 kb on + strand, within QEN71_RS25145 at 5597.309 kb on - strand, within QEN71_RS25145 at 5597.398 kb on + strand, within QEN71_RS25145 at 5597.398 kb on + strand, within QEN71_RS25145 at 5597.399 kb on - strand, within QEN71_RS25145 at 5597.399 kb on - strand, within QEN71_RS25145 at 5597.399 kb on - strand, within QEN71_RS25145 at 5597.425 kb on + strand, within QEN71_RS25145 at 5597.431 kb on + strand, within QEN71_RS25145 at 5597.431 kb on + strand, within QEN71_RS25145 at 5597.432 kb on - strand, within QEN71_RS25145 at 5597.432 kb on - strand, within QEN71_RS25145 at 5597.432 kb on - strand, within QEN71_RS25145 at 5597.432 kb on - strand, within QEN71_RS25145 at 5597.617 kb on + strand, within QEN71_RS25145 at 5597.617 kb on + strand, within QEN71_RS25145 at 5597.618 kb on - strand, within QEN71_RS25145 at 5597.687 kb on - strand, within QEN71_RS25145 at 5597.836 kb on + strand, within QEN71_RS25145 at 5597.836 kb on + strand, within QEN71_RS25145 at 5597.836 kb on + strand, within QEN71_RS25145 at 5597.836 kb on + strand, within QEN71_RS25145 at 5597.836 kb on + strand, within QEN71_RS25145 at 5597.836 kb on + strand, within QEN71_RS25145 at 5597.837 kb on - strand, within QEN71_RS25145 at 5597.837 kb on - strand, within QEN71_RS25145 at 5597.837 kb on - strand, within QEN71_RS25145 at 5597.845 kb on + strand, within QEN71_RS25145 at 5597.932 kb on + strand, within QEN71_RS25145 at 5597.932 kb on + strand, within QEN71_RS25145 at 5597.932 kb on + strand, within QEN71_RS25145 at 5597.933 kb on - strand, within QEN71_RS25145 at 5597.933 kb on - strand, within QEN71_RS25145 at 5598.636 kb on - strand at 5598.687 kb on + strand at 5598.687 kb on + strand at 5598.688 kb on - strand at 5598.688 kb on - strand at 5598.688 kb on - strand at 5598.749 kb on + strand at 5598.768 kb on - strand at 5598.799 kb on + strand at 5598.799 kb on + strand at 5598.799 kb on + strand at 5598.799 kb on + strand at 5598.799 kb on + strand at 5598.799 kb on + strand at 5598.799 kb on + strand at 5598.799 kb on + strand at 5598.800 kb on - strand at 5598.800 kb on - strand at 5598.800 kb on - strand at 5598.800 kb on - strand at 5598.887 kb on + strand at 5598.888 kb on - strand at 5598.888 kb on - strand at 5598.933 kb on - strand at 5598.951 kb on + strand at 5598.957 kb on + strand at 5598.957 kb on + strand at 5598.958 kb on - strand at 5598.958 kb on - strand at 5598.958 kb on - strand at 5598.958 kb on - strand at 5598.958 kb on - strand at 5599.097 kb on + strand, within QEN71_RS25150 at 5599.097 kb on + strand, within QEN71_RS25150 at 5599.097 kb on + strand, within QEN71_RS25150 at 5599.097 kb on + strand, within QEN71_RS25150 at 5599.098 kb on - strand, within QEN71_RS25150 at 5599.098 kb on - strand, within QEN71_RS25150 at 5599.099 kb on + strand, within QEN71_RS25150 at 5599.100 kb on - strand, within QEN71_RS25150 at 5599.100 kb on - strand, within QEN71_RS25150 at 5599.392 kb on + strand at 5599.392 kb on + strand at 5599.392 kb on + strand at 5599.435 kb on + strand, within QEN71_RS25155 at 5599.435 kb on + strand, within QEN71_RS25155 at 5599.436 kb on - strand, within QEN71_RS25155
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (C) remove 5,595,739 + QEN71_RS25140 0.26 +0.0 5,595,739 + QEN71_RS25140 0.26 -0.7 5,595,739 + QEN71_RS25140 0.26 -2.5 5,595,740 - QEN71_RS25140 0.26 +0.1 5,595,740 - QEN71_RS25140 0.26 -1.6 5,595,740 - QEN71_RS25140 0.26 -1.0 5,596,189 + QEN71_RS25140 0.69 -0.6 5,596,189 + QEN71_RS25140 0.69 -0.6 5,596,189 + QEN71_RS25140 0.69 +0.0 5,596,189 + QEN71_RS25140 0.69 -0.6 5,596,189 + QEN71_RS25140 0.69 -1.3 5,596,189 + QEN71_RS25140 0.69 -0.9 5,596,189 + QEN71_RS25140 0.69 -2.0 5,596,190 - QEN71_RS25140 0.69 -0.6 5,596,190 - QEN71_RS25140 0.69 +0.0 5,596,190 - QEN71_RS25140 0.69 +0.4 5,596,190 - QEN71_RS25140 0.69 -0.1 5,596,190 - QEN71_RS25140 0.69 -0.1 5,596,190 - QEN71_RS25140 0.69 -1.1 5,596,546 + +0.2 5,596,546 + -1.8 5,596,546 + -0.6 5,596,547 - +0.4 5,596,547 - -1.3 5,596,547 - -0.6 5,596,547 - +0.9 5,596,547 - -0.1 5,596,570 + +0.4 5,596,570 + -1.7 5,596,570 + -0.0 5,596,570 + -0.4 5,596,570 + -1.5 5,596,570 + +0.0 5,596,570 + -2.9 5,596,570 + -1.4 5,596,570 + +0.4 5,596,571 - -0.1 5,596,571 - -1.1 5,596,571 - -0.1 5,596,571 - -0.5 5,596,577 - -1.4 5,596,577 - +0.8 5,596,627 + +0.9 5,596,627 + +0.5 5,596,627 + +0.3 5,596,628 - +1.0 5,596,628 - +0.0 5,596,648 + +0.0 5,596,649 - +0.3 5,596,806 - QEN71_RS25145 0.15 +0.5 5,596,806 - QEN71_RS25145 0.15 -1.0 5,596,806 - QEN71_RS25145 0.15 -0.3 5,596,806 - QEN71_RS25145 0.15 +0.1 5,596,930 + QEN71_RS25145 0.21 +0.2 5,596,930 + QEN71_RS25145 0.21 -2.2 5,596,931 - QEN71_RS25145 0.21 -0.3 5,596,931 - QEN71_RS25145 0.21 -1.9 5,596,931 - QEN71_RS25145 0.21 -0.1 5,596,931 - QEN71_RS25145 0.21 -0.6 5,596,931 - QEN71_RS25145 0.21 -2.5 5,596,954 + QEN71_RS25145 0.22 -0.4 5,596,954 + QEN71_RS25145 0.22 -1.7 5,596,954 + QEN71_RS25145 0.22 -1.4 5,596,955 - QEN71_RS25145 0.22 -1.4 5,596,955 - QEN71_RS25145 0.22 -0.8 5,596,955 - QEN71_RS25145 0.22 -0.5 5,596,970 + QEN71_RS25145 0.23 -1.2 5,596,970 + QEN71_RS25145 0.23 -0.1 5,596,970 + QEN71_RS25145 0.23 -2.5 5,596,970 + QEN71_RS25145 0.23 +0.4 5,596,970 + QEN71_RS25145 0.23 -0.2 5,596,970 + QEN71_RS25145 0.23 -0.7 5,596,971 - QEN71_RS25145 0.23 -0.6 5,596,971 - QEN71_RS25145 0.23 -1.0 5,596,971 - QEN71_RS25145 0.23 -0.9 5,596,971 - QEN71_RS25145 0.23 +0.2 5,596,971 - QEN71_RS25145 0.23 -0.9 5,596,971 - QEN71_RS25145 0.23 +0.2 5,596,971 - QEN71_RS25145 0.23 +0.4 5,597,023 + QEN71_RS25145 0.26 +0.6 5,597,023 + QEN71_RS25145 0.26 -0.6 5,597,083 + QEN71_RS25145 0.29 -0.3 5,597,084 - QEN71_RS25145 0.29 -1.3 5,597,084 - QEN71_RS25145 0.29 -0.0 5,597,089 + QEN71_RS25145 0.29 -1.1 5,597,089 + QEN71_RS25145 0.29 -0.7 5,597,090 - QEN71_RS25145 0.29 -0.9 5,597,090 - QEN71_RS25145 0.29 -0.7 5,597,092 + QEN71_RS25145 0.29 -0.6 5,597,092 + QEN71_RS25145 0.29 +1.6 5,597,092 + QEN71_RS25145 0.29 -0.2 5,597,092 + QEN71_RS25145 0.29 +0.0 5,597,092 + QEN71_RS25145 0.29 +0.6 5,597,092 + QEN71_RS25145 0.29 +1.0 5,597,093 - QEN71_RS25145 0.29 +0.0 5,597,093 - QEN71_RS25145 0.29 -0.1 5,597,093 - QEN71_RS25145 0.29 +0.4 5,597,093 - QEN71_RS25145 0.29 -1.1 5,597,093 - QEN71_RS25145 0.29 +2.0 5,597,167 + QEN71_RS25145 0.33 +0.0 5,597,168 - QEN71_RS25145 0.33 +0.0 5,597,173 + QEN71_RS25145 0.33 -0.7 5,597,173 + QEN71_RS25145 0.33 -0.1 5,597,182 + QEN71_RS25145 0.34 +0.2 5,597,182 + QEN71_RS25145 0.34 -0.1 5,597,182 + QEN71_RS25145 0.34 -2.0 5,597,182 + QEN71_RS25145 0.34 +0.1 5,597,182 + QEN71_RS25145 0.34 -1.2 5,597,182 + QEN71_RS25145 0.34 -0.6 5,597,182 + QEN71_RS25145 0.34 +0.1 5,597,183 - QEN71_RS25145 0.34 -1.3 5,597,183 - QEN71_RS25145 0.34 -0.6 5,597,183 - QEN71_RS25145 0.34 +0.2 5,597,183 - QEN71_RS25145 0.34 -0.6 5,597,183 - QEN71_RS25145 0.34 -0.7 5,597,183 - QEN71_RS25145 0.34 -0.8 5,597,183 - QEN71_RS25145 0.34 -0.2 5,597,183 - QEN71_RS25145 0.34 -1.9 5,597,183 - QEN71_RS25145 0.34 -0.3 5,597,183 - QEN71_RS25145 0.34 -1.8 5,597,185 + QEN71_RS25145 0.34 -0.4 5,597,185 + QEN71_RS25145 0.34 -0.2 5,597,185 + QEN71_RS25145 0.34 -0.6 5,597,185 + QEN71_RS25145 0.34 +0.7 5,597,185 + QEN71_RS25145 0.34 -0.5 5,597,185 + QEN71_RS25145 0.34 -1.7 5,597,185 + QEN71_RS25145 0.34 +0.0 5,597,186 - QEN71_RS25145 0.34 +0.1 5,597,186 - QEN71_RS25145 0.34 -1.1 5,597,186 - QEN71_RS25145 0.34 -1.5 5,597,186 - QEN71_RS25145 0.34 -1.9 5,597,186 - QEN71_RS25145 0.34 +0.3 5,597,186 - QEN71_RS25145 0.34 -0.4 5,597,186 - QEN71_RS25145 0.34 -0.8 5,597,213 - QEN71_RS25145 0.36 -1.2 5,597,267 - QEN71_RS25145 0.38 -0.5 5,597,267 - QEN71_RS25145 0.38 -0.8 5,597,308 + QEN71_RS25145 0.40 +0.2 5,597,309 - QEN71_RS25145 0.40 +0.0 5,597,398 + QEN71_RS25145 0.45 +0.1 5,597,398 + QEN71_RS25145 0.45 -1.9 5,597,399 - QEN71_RS25145 0.45 -1.9 5,597,399 - QEN71_RS25145 0.45 -0.3 5,597,399 - QEN71_RS25145 0.45 -0.9 5,597,425 + QEN71_RS25145 0.46 -0.3 5,597,431 + QEN71_RS25145 0.47 -1.2 5,597,431 + QEN71_RS25145 0.47 -0.7 5,597,432 - QEN71_RS25145 0.47 -0.9 5,597,432 - QEN71_RS25145 0.47 -0.9 5,597,432 - QEN71_RS25145 0.47 -1.1 5,597,432 - QEN71_RS25145 0.47 -0.6 5,597,617 + QEN71_RS25145 0.56 -1.4 5,597,617 + QEN71_RS25145 0.56 -0.4 5,597,618 - QEN71_RS25145 0.56 +1.9 5,597,687 - QEN71_RS25145 0.60 -0.8 5,597,836 + QEN71_RS25145 0.67 +0.4 5,597,836 + QEN71_RS25145 0.67 +0.0 5,597,836 + QEN71_RS25145 0.67 -1.3 5,597,836 + QEN71_RS25145 0.67 -0.8 5,597,836 + QEN71_RS25145 0.67 -0.1 5,597,836 + QEN71_RS25145 0.67 +0.0 5,597,837 - QEN71_RS25145 0.67 -0.1 5,597,837 - QEN71_RS25145 0.67 -0.2 5,597,837 - QEN71_RS25145 0.67 -0.5 5,597,845 + QEN71_RS25145 0.68 -0.4 5,597,932 + QEN71_RS25145 0.72 +0.7 5,597,932 + QEN71_RS25145 0.72 -0.4 5,597,932 + QEN71_RS25145 0.72 -1.5 5,597,933 - QEN71_RS25145 0.72 -1.4 5,597,933 - QEN71_RS25145 0.72 +0.4 5,598,636 - -0.4 5,598,687 + -0.7 5,598,687 + -0.1 5,598,688 - +0.1 5,598,688 - -0.3 5,598,688 - -1.8 5,598,749 + +0.0 5,598,768 - -0.1 5,598,799 + -2.3 5,598,799 + -0.5 5,598,799 + +0.0 5,598,799 + -1.0 5,598,799 + -0.3 5,598,799 + -0.5 5,598,799 + -2.1 5,598,799 + -2.4 5,598,800 - +0.8 5,598,800 - +1.3 5,598,800 - -0.0 5,598,800 - -0.4 5,598,887 + -0.3 5,598,888 - +0.4 5,598,888 - +1.0 5,598,933 - +0.6 5,598,951 + -2.1 5,598,957 + -0.3 5,598,957 + -0.1 5,598,958 - -0.0 5,598,958 - +1.3 5,598,958 - +1.0 5,598,958 - +0.4 5,598,958 - -0.3 5,599,097 + QEN71_RS25150 0.17 +1.7 5,599,097 + QEN71_RS25150 0.17 +2.0 5,599,097 + QEN71_RS25150 0.17 +1.8 5,599,097 + QEN71_RS25150 0.17 +0.8 5,599,098 - QEN71_RS25150 0.18 +2.0 5,599,098 - QEN71_RS25150 0.18 -0.3 5,599,099 + QEN71_RS25150 0.18 +1.3 5,599,100 - QEN71_RS25150 0.18 +2.4 5,599,100 - QEN71_RS25150 0.18 +1.6 5,599,392 + -0.6 5,599,392 + +0.0 5,599,392 + +0.2 5,599,435 + QEN71_RS25155 0.13 +0.7 5,599,435 + QEN71_RS25155 0.13 +0.5 5,599,436 - QEN71_RS25155 0.14 -1.0
Or see this region's nucleotide sequence