Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS17275

Experiment: planktonic; Day1; NLDM; Aluminum chloride 1mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	planktonic; Day1; NLDM; Aluminum chloride 1mM
3,797,057	+		LRK53_RS17265	0.40	+0.1
3,797,057	+		LRK53_RS17265	0.40	-0.9
3,797,057	+		LRK53_RS17265	0.40	-1.3
3,797,057	+		LRK53_RS17265	0.40	-1.4
3,797,058	-		LRK53_RS17265	0.40	+0.8
3,797,058	-		LRK53_RS17265	0.40	+0.5
3,797,058	-		LRK53_RS17265	0.40	+0.1
3,797,074	+		LRK53_RS17265	0.42	+3.1
3,797,075	-		LRK53_RS17265	0.42	+0.4
3,797,075	-		LRK53_RS17265	0.42	-0.1
3,797,126	-		LRK53_RS17265	0.48	+0.5
3,797,126	-		LRK53_RS17265	0.48	-0.1
3,797,197	-		LRK53_RS17265	0.57	-0.0
3,797,441	-		LRK53_RS17265	0.87	+0.8
3,797,441	-		LRK53_RS17265	0.87	-0.2
3,797,441	-		LRK53_RS17265	0.87	-0.3
3,797,524	+				-0.5
3,797,524	+				-0.5
3,797,525	-				-1.4
3,797,525	-				-1.5
3,797,525	-				-0.2
3,797,525	-				+0.0
3,797,525	-				-1.5
3,797,525	-				-0.3
3,797,525	-				-0.5
3,797,525	-				-0.7
3,797,525	-				+0.8
3,797,525	-				+0.7
3,797,525	-				-0.2
3,797,525	-				-1.9
3,797,525	-				-1.7
3,797,525	-				-0.5
3,797,574	+				-1.2
3,797,574	+				-0.1
3,797,574	+				+0.7
3,797,575	-				-0.7
3,797,631	+		LRK53_RS17270	0.13	-0.3
3,797,632	-		LRK53_RS17270	0.13	+1.7
3,797,824	+		LRK53_RS17270	0.56	+1.2
3,797,824	+		LRK53_RS17270	0.56	-1.2
3,797,824	+		LRK53_RS17270	0.56	-0.9
3,797,824	+		LRK53_RS17270	0.56	-0.7
3,797,824	+		LRK53_RS17270	0.56	-1.0
3,797,824	+		LRK53_RS17270	0.56	-0.2
3,797,824	+		LRK53_RS17270	0.56	-2.1
3,797,825	-		LRK53_RS17270	0.56	-0.2
3,797,825	-		LRK53_RS17270	0.56	-0.8
3,797,825	-		LRK53_RS17270	0.56	-1.0
3,797,825	-		LRK53_RS17270	0.56	-1.8
3,797,826	+		LRK53_RS17270	0.57	+0.3
3,797,826	+		LRK53_RS17270	0.57	-1.3
3,797,826	+		LRK53_RS17270	0.57	+0.8
3,797,826	+		LRK53_RS17270	0.57	+0.5
3,797,826	+		LRK53_RS17270	0.57	-0.5
3,797,826	+		LRK53_RS17270	0.57	-2.9
3,797,826	+		LRK53_RS17270	0.57	-0.5
3,797,827	-		LRK53_RS17270	0.57	-0.2
3,797,827	-		LRK53_RS17270	0.57	-0.1
3,797,827	-		LRK53_RS17270	0.57	+1.6
3,797,827	-		LRK53_RS17270	0.57	-0.3
3,797,827	-		LRK53_RS17270	0.57	-0.1
3,797,827	-		LRK53_RS17270	0.57	-0.3
3,797,827	-		LRK53_RS17270	0.57	-1.9
3,797,827	-		LRK53_RS17270	0.57	-0.5
3,798,013	+				+1.1
3,798,013	+				-2.5
3,798,013	+				-1.9
3,798,013	+				-1.0
3,798,014	-				-0.7
3,798,014	-				-1.4
3,798,014	-				-2.3
3,798,033	+				+0.5
3,798,033	+				-0.0
3,798,033	+				-1.2
3,798,034	-				-1.0
3,798,034	-				-0.3
3,798,105	+				-3.2
3,798,105	+				+0.2
3,798,105	+				-0.8
3,798,105	+				+1.5
3,798,105	+				-1.2
3,798,105	+				+0.9
3,798,105	+				+0.0
3,798,105	+				-2.9
3,798,105	+				+0.1
3,798,105	+				-1.3
3,798,106	-				-0.7
3,798,106	-				-0.7
3,798,106	-				-0.8
3,798,106	-				-0.0
3,798,106	-				-1.6
3,798,106	-				-0.3
3,798,106	-				+0.9
3,798,106	-				-1.3
3,798,106	-				+0.8
3,798,106	-				+1.3
3,798,106	-				-1.9
3,798,106	-				-1.5
3,798,106	-				-0.8
3,798,147	+				-0.3
3,798,250	-		LRK53_RS17275	0.15	-0.6
3,798,312	+		LRK53_RS17275	0.19	-0.0
3,798,312	+		LRK53_RS17275	0.19	-1.3
3,798,312	+		LRK53_RS17275	0.19	+1.4
3,798,312	+		LRK53_RS17275	0.19	+1.4
3,798,313	-		LRK53_RS17275	0.19	+0.8
3,798,313	-		LRK53_RS17275	0.19	-1.9
3,798,313	-		LRK53_RS17275	0.19	-1.0
3,798,313	-		LRK53_RS17275	0.19	-1.4
3,798,313	-		LRK53_RS17275	0.19	-0.9
3,798,340	+		LRK53_RS17275	0.21	+0.8
3,798,340	+		LRK53_RS17275	0.21	-0.7
3,798,340	+		LRK53_RS17275	0.21	-0.3
3,798,340	+		LRK53_RS17275	0.21	+1.8
3,798,341	-		LRK53_RS17275	0.21	+2.0
3,798,385	-		LRK53_RS17275	0.23	-0.3
3,798,498	+		LRK53_RS17275	0.31	+0.8
3,798,498	+		LRK53_RS17275	0.31	-1.3
3,798,498	+		LRK53_RS17275	0.31	-0.7
3,798,498	+		LRK53_RS17275	0.31	+0.8
3,798,499	-		LRK53_RS17275	0.31	-0.8
3,798,499	-		LRK53_RS17275	0.31	+0.4
3,798,588	+		LRK53_RS17275	0.37	+1.6
3,798,588	+		LRK53_RS17275	0.37	+0.3
3,798,588	+		LRK53_RS17275	0.37	+0.7
3,798,588	+		LRK53_RS17275	0.37	-3.1
3,798,588	+		LRK53_RS17275	0.37	-0.5
3,798,588	+		LRK53_RS17275	0.37	-0.3
3,798,588	+		LRK53_RS17275	0.37	-0.4
3,798,588	+		LRK53_RS17275	0.37	+1.7
3,798,588	+		LRK53_RS17275	0.37	-0.6
3,798,588	+		LRK53_RS17275	0.37	+1.0
3,798,588	+		LRK53_RS17275	0.37	-0.6
3,798,588	+		LRK53_RS17275	0.37	-1.0
3,798,588	+		LRK53_RS17275	0.37	+0.2
3,798,588	+		LRK53_RS17275	0.37	-0.5
3,798,588	+		LRK53_RS17275	0.37	-1.8
3,798,588	+		LRK53_RS17275	0.37	-1.6
3,798,588	+		LRK53_RS17275	0.37	-0.8
3,798,588	+		LRK53_RS17275	0.37	-0.9
3,798,588	+		LRK53_RS17275	0.37	+1.2
3,798,588	+		LRK53_RS17275	0.37	-0.9
3,798,589	-		LRK53_RS17275	0.37	-0.2
3,798,589	-		LRK53_RS17275	0.37	-0.6
3,798,589	-		LRK53_RS17275	0.37	-1.7
3,798,589	-		LRK53_RS17275	0.37	-0.7
3,798,589	-		LRK53_RS17275	0.37	+0.9
3,798,589	-		LRK53_RS17275	0.37	+1.5
3,798,589	-		LRK53_RS17275	0.37	+0.3
3,798,589	-		LRK53_RS17275	0.37	-1.1
3,798,589	-		LRK53_RS17275	0.37	+1.1
3,798,589	-		LRK53_RS17275	0.37	-2.1
3,798,589	-		LRK53_RS17275	0.37	-0.7
3,798,589	-		LRK53_RS17275	0.37	+1.3
3,798,589	-		LRK53_RS17275	0.37	+0.3
3,798,894	+		LRK53_RS17275	0.57	-1.0
3,798,894	+		LRK53_RS17275	0.57	+0.9
3,798,895	-		LRK53_RS17275	0.57	+0.3
3,799,057	+		LRK53_RS17275	0.68	-2.7
3,799,104	+		LRK53_RS17275	0.71	-2.3
3,799,104	+		LRK53_RS17275	0.71	-1.3
3,799,105	-		LRK53_RS17275	0.71	-0.6
3,799,270	+		LRK53_RS17275	0.82	-0.2
3,799,270	+		LRK53_RS17275	0.82	-2.2
3,799,270	+		LRK53_RS17275	0.82	+0.4
3,799,270	+		LRK53_RS17275	0.82	-0.6
3,799,270	+		LRK53_RS17275	0.82	+1.5
3,799,270	+		LRK53_RS17275	0.82	-0.0
3,799,270	+		LRK53_RS17275	0.82	-1.5
3,799,270	+		LRK53_RS17275	0.82	+0.0
3,799,270	+		LRK53_RS17275	0.82	-0.9
3,799,270	+		LRK53_RS17275	0.82	-1.1
3,799,270	+		LRK53_RS17275	0.82	-0.3
3,799,270	+		LRK53_RS17275	0.82	-0.2
3,799,270	+		LRK53_RS17275	0.82	-0.3
3,799,271	-		LRK53_RS17275	0.82	+1.2
3,799,271	-		LRK53_RS17275	0.82	-0.9
3,799,271	-		LRK53_RS17275	0.82	-0.3
3,799,271	-		LRK53_RS17275	0.82	+0.4
3,799,271	-		LRK53_RS17275	0.82	+0.0
3,799,271	-		LRK53_RS17275	0.82	-1.9
3,799,271	-		LRK53_RS17275	0.82	+0.1
3,799,271	-		LRK53_RS17275	0.82	-1.4
3,799,271	-		LRK53_RS17275	0.82	-1.7
3,799,271	-		LRK53_RS17275	0.82	-0.9
3,799,271	-		LRK53_RS17275	0.82	-1.6
3,799,271	-		LRK53_RS17275	0.82	+0.1
3,799,271	-		LRK53_RS17275	0.82	-1.7
3,799,271	-		LRK53_RS17275	0.82	+1.1
3,799,271	-		LRK53_RS17275	0.82	-1.6
3,799,284	+		LRK53_RS17275	0.83	+0.1
3,799,285	-		LRK53_RS17275	0.83	+0.3
3,799,285	-		LRK53_RS17275	0.83	-1.1
3,799,285	-		LRK53_RS17275	0.83	-0.6
3,799,349	+		LRK53_RS17275	0.87	+0.3
3,799,349	+		LRK53_RS17275	0.87	-0.6
3,799,349	+		LRK53_RS17275	0.87	-0.2
3,799,349	+		LRK53_RS17275	0.87	-0.9
3,799,349	+		LRK53_RS17275	0.87	-0.0
3,799,350	-		LRK53_RS17275	0.87	-0.7
3,799,350	-		LRK53_RS17275	0.87	-1.1
3,799,350	-		LRK53_RS17275	0.87	+0.3
3,799,350	-		LRK53_RS17275	0.87	+1.5
3,799,350	-		LRK53_RS17275	0.87	-1.0
3,799,350	-		LRK53_RS17275	0.87	-0.1
3,799,350	-		LRK53_RS17275	0.87	-0.0
3,799,581	+				+0.3
3,799,581	+				-0.7
3,799,581	+				-0.0
3,799,608	+				+0.9
3,799,608	+				-0.6
3,799,608	+				-1.5
3,799,608	+				-0.6
3,799,608	+				-0.4
3,799,608	+				-0.3
3,799,608	+				-0.7
3,799,608	+				+0.1
3,799,609	-				-0.9
3,799,609	-				-1.5
3,799,609	-				-0.2
3,799,609	-				+0.7
3,799,609	-				-0.6
3,799,609	-				-2.9
3,799,609	-				-1.3
3,799,609	-				-1.2
3,799,609	-				-0.0
3,799,609	-				-0.1
3,799,609	-				-1.0
3,799,673	-		LRK53_RS17280	0.18	-1.6
3,799,673	-		LRK53_RS17280	0.18	+1.0
3,799,673	-		LRK53_RS17280	0.18	+1.8
3,799,707	+		LRK53_RS17280	0.24	+1.5
3,799,707	+		LRK53_RS17280	0.24	-1.4
3,799,707	+		LRK53_RS17280	0.24	-1.0
3,799,707	+		LRK53_RS17280	0.24	-0.2
3,799,707	+		LRK53_RS17280	0.24	-0.7
3,799,707	+		LRK53_RS17280	0.24	-0.9
3,799,707	+		LRK53_RS17280	0.24	-2.0
3,799,707	+		LRK53_RS17280	0.24	+0.5
3,799,708	-		LRK53_RS17280	0.24	-1.2
3,799,708	-		LRK53_RS17280	0.24	+0.2
3,799,708	-		LRK53_RS17280	0.24	+0.7
3,799,708	-		LRK53_RS17280	0.24	-0.5
3,799,708	-		LRK53_RS17280	0.24	-0.0
3,799,708	-		LRK53_RS17280	0.24	-1.6
3,799,708	-		LRK53_RS17280	0.24	+0.3
3,799,708	-		LRK53_RS17280	0.24	-1.2
3,799,708	-		LRK53_RS17280	0.24	-0.2
3,799,708	-		LRK53_RS17280	0.24	-1.2
3,799,708	-		LRK53_RS17280	0.24	+0.8
3,799,708	-		LRK53_RS17280	0.24	-0.4
3,799,708	-		LRK53_RS17280	0.24	+0.3
3,799,708	-		LRK53_RS17280	0.24	+1.3
3,799,708	-		LRK53_RS17280	0.24	-0.6
3,799,708	-		LRK53_RS17280	0.24	-0.8
3,799,728	+		LRK53_RS17280	0.28	-0.0
3,799,728	+		LRK53_RS17280	0.28	-0.5
3,799,728	+		LRK53_RS17280	0.28	+0.1
3,799,728	+		LRK53_RS17280	0.28	-0.3
3,799,728	+		LRK53_RS17280	0.28	+0.3
3,799,728	+		LRK53_RS17280	0.28	-0.2
3,799,728	+		LRK53_RS17280	0.28	-0.2
3,799,728	+		LRK53_RS17280	0.28	-0.9
3,799,728	+		LRK53_RS17280	0.28	-0.3
3,799,728	+		LRK53_RS17280	0.28	+0.3
3,799,728	+		LRK53_RS17280	0.28	-1.4
3,799,729	-		LRK53_RS17280	0.28	+0.1
3,799,729	-		LRK53_RS17280	0.28	-0.7
3,799,729	-		LRK53_RS17280	0.28	-0.2
3,799,729	-		LRK53_RS17280	0.28	-1.7
3,799,729	-		LRK53_RS17280	0.28	-1.0
3,799,729	-		LRK53_RS17280	0.28	+0.7
3,799,729	-		LRK53_RS17280	0.28	-0.6
3,799,729	-		LRK53_RS17280	0.28	-1.8
3,799,729	-		LRK53_RS17280	0.28	+0.2
3,799,842	+		LRK53_RS17280	0.49	-0.2
3,799,842	+		LRK53_RS17280	0.49	-0.9
3,799,843	-		LRK53_RS17280	0.49	-1.9
3,799,843	-		LRK53_RS17280	0.49	-1.5
3,799,843	-		LRK53_RS17280	0.49	-0.5
3,799,843	-		LRK53_RS17280	0.49	+0.6
3,799,843	-		LRK53_RS17280	0.49	+2.1
3,799,843	-		LRK53_RS17280	0.49	-2.4
3,799,857	+		LRK53_RS17280	0.52	+1.7
3,799,857	+		LRK53_RS17280	0.52	+0.3
3,799,857	+		LRK53_RS17280	0.52	-0.4
3,799,857	+		LRK53_RS17280	0.52	-1.0
3,799,857	+		LRK53_RS17280	0.52	-1.5
3,799,857	+		LRK53_RS17280	0.52	-2.3
3,799,858	-		LRK53_RS17280	0.52	-1.0
3,799,858	-		LRK53_RS17280	0.52	-1.7
3,799,858	-		LRK53_RS17280	0.52	-1.7
3,799,858	-		LRK53_RS17280	0.52	+3.5
3,799,858	-		LRK53_RS17280	0.52	-2.0
3,799,858	-		LRK53_RS17280	0.52	-0.6
3,799,894	+		LRK53_RS17280	0.58	-1.3
3,799,894	+		LRK53_RS17280	0.58	+0.9
3,799,895	-		LRK53_RS17280	0.59	-0.7
3,799,989	+		LRK53_RS17280	0.76	+0.5
3,799,990	-		LRK53_RS17280	0.76	+0.8
3,800,029	+		LRK53_RS17280	0.83	-1.1
3,800,030	-		LRK53_RS17280	0.83	-0.9
3,800,041	-		LRK53_RS17280	0.85	-0.6
3,800,132	+				+1.5
3,800,132	+				-1.7
3,800,132	+				-1.2
3,800,132	+				-2.3
3,800,132	+				-2.9
3,800,132	+				-3.3
3,800,132	+				-0.6
3,800,133	-				+1.3
3,800,180	+				-1.1
3,800,180	+				-0.8
3,800,180	+				-3.3
3,800,180	+				+0.6
3,800,180	+				-1.7
3,800,180	+				-1.0
3,800,181	-				-1.4
3,800,181	-				-0.4
3,800,181	-				-1.0
3,800,181	-				+1.4
3,800,181	-				-1.0
3,800,181	-				-1.2
3,800,186	+				+0.2
3,800,186	+				-1.4
3,800,186	+				-1.6
3,800,186	+				-0.8
3,800,186	+				-0.5
3,800,186	+				+0.4
3,800,186	+				-0.7
3,800,187	-				-0.3
3,800,187	-				-1.6
3,800,187	-				-1.7
3,800,187	-				-2.6
3,800,187	-				-2.8
3,800,187	-				-0.7
3,800,187	-				-0.3
3,800,187	-				-1.5
3,800,187	-				+2.0
3,800,187	-				-2.3
3,800,187	-				-0.8
3,800,187	-				+1.7
3,800,187	-				-1.3
3,800,187	-				-0.2
3,800,187	-				-1.1
3,800,187	-				-0.9
3,800,187	-				+1.8
3,800,187	-				-2.0
3,800,188	+				-1.0
3,800,188	+				-2.0
3,800,188	+				-2.1
3,800,188	+				-0.5
3,800,188	+				-1.9
3,800,188	+				-0.4
3,800,189	-				-2.6
3,800,318	+				-0.2
3,800,318	+				-0.9
3,800,318	+				+1.1
3,800,318	+				-0.6
3,800,318	+				-1.1
3,800,318	+				-0.3
3,800,318	+				-0.2
3,800,318	+				+0.2
3,800,318	+				+0.4
3,800,319	-				-0.5
3,800,319	-				-0.8
3,800,319	-				+0.4
3,800,319	-				-0.9
3,800,319	-				-1.7
3,800,319	-				-2.3
3,800,319	-				-0.9
3,800,319	-				-1.7
3,800,319	-				-2.7
3,800,319	-				-1.2
3,800,319	-				+1.2
3,800,319	-				-1.0
3,800,319	-				-1.8
3,800,319	-				-0.3
3,800,319	-				-0.9
3,800,319	-				-0.3
3,800,319	-				-0.7
3,800,319	-				-0.8
3,800,319	-				-2.3
3,800,346	+				-0.2
3,800,346	+				-3.6
3,800,347	-				-0.7