Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS16390

Experiment: planktonic; Day1; NLDM; Aluminum chloride 1mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	planktonic; Day1; NLDM; Aluminum chloride 1mM
3,605,399	-				-0.5
3,605,426	-				-1.4
3,605,426	-				-0.4
3,605,426	-				+0.3
3,605,426	-				+1.0
3,605,429	+				+1.3
3,605,429	+				-3.3
3,605,429	+				-1.2
3,605,429	+				-0.4
3,605,429	+				-1.0
3,605,429	+				-1.2
3,605,429	+				-1.2
3,605,429	+				-0.2
3,605,430	-				-0.2
3,605,430	-				+0.2
3,605,430	-				-0.7
3,605,430	-				-0.8
3,605,430	-				-1.3
3,605,430	-				-0.3
3,605,431	+				-1.2
3,605,446	+				-1.1
3,605,446	+				+0.5
3,605,446	+				-1.2
3,605,447	-				-0.3
3,605,447	-				+0.0
3,605,447	-				-0.2
3,605,447	-				+0.1
3,605,488	+		LRK53_RS16380	0.17	+0.3
3,605,488	+		LRK53_RS16380	0.17	-0.7
3,605,488	+		LRK53_RS16380	0.17	-1.6
3,605,488	+		LRK53_RS16380	0.17	-1.1
3,605,488	+		LRK53_RS16380	0.17	-2.5
3,605,488	+		LRK53_RS16380	0.17	+1.2
3,605,488	+		LRK53_RS16380	0.17	-1.5
3,605,489	-		LRK53_RS16380	0.18	-2.9
3,605,489	-		LRK53_RS16380	0.18	-2.6
3,605,489	-		LRK53_RS16380	0.18	-0.2
3,605,489	-		LRK53_RS16380	0.18	-0.5
3,605,489	-		LRK53_RS16380	0.18	-2.1
3,605,489	-		LRK53_RS16380	0.18	-0.0
3,605,489	-		LRK53_RS16380	0.18	-0.6
3,605,489	-		LRK53_RS16380	0.18	+0.8
3,605,489	-		LRK53_RS16380	0.18	+0.5
3,605,489	-		LRK53_RS16380	0.18	-1.9
3,605,489	-		LRK53_RS16380	0.18	-1.9
3,605,489	-		LRK53_RS16380	0.18	-1.5
3,605,665	+		LRK53_RS16380	0.66	+1.4
3,605,665	+		LRK53_RS16380	0.66	-0.2
3,605,665	+		LRK53_RS16380	0.66	-0.0
3,605,665	+		LRK53_RS16380	0.66	+0.7
3,605,665	+		LRK53_RS16380	0.66	-1.3
3,605,665	+		LRK53_RS16380	0.66	-0.8
3,605,665	+		LRK53_RS16380	0.66	+0.3
3,605,665	+		LRK53_RS16380	0.66	+0.5
3,605,666	-		LRK53_RS16380	0.66	-0.1
3,605,666	-		LRK53_RS16380	0.66	-1.4
3,605,666	-		LRK53_RS16380	0.66	+0.2
3,605,666	-		LRK53_RS16380	0.66	-2.3
3,605,666	-		LRK53_RS16380	0.66	-2.8
3,605,666	-		LRK53_RS16380	0.66	-1.3
3,605,762	+				-1.4
3,605,763	-				-0.0
3,605,763	-				-0.8
3,605,810	+				+0.4
3,605,810	+				-0.0
3,605,810	+				-0.4
3,605,810	+				+0.2
3,605,810	+				+1.5
3,605,810	+				-2.2
3,605,810	+				-1.2
3,605,810	+				-0.8
3,605,810	+				-0.2
3,605,811	-				-2.0
3,605,811	-				-1.1
3,605,811	-				-0.3
3,605,811	-				-2.0
3,605,811	-				-0.8
3,605,811	-				-0.5
3,605,884	+		LRK53_RS16385	0.21	-1.7
3,605,884	+		LRK53_RS16385	0.21	+0.4
3,605,884	+		LRK53_RS16385	0.21	+1.7
3,605,884	+		LRK53_RS16385	0.21	-0.4
3,605,884	+		LRK53_RS16385	0.21	-0.6
3,605,884	+		LRK53_RS16385	0.21	+1.6
3,605,885	-		LRK53_RS16385	0.21	-0.7
3,605,885	-		LRK53_RS16385	0.21	-0.8
3,605,885	-		LRK53_RS16385	0.21	+0.2
3,605,885	-		LRK53_RS16385	0.21	+0.3
3,605,944	-		LRK53_RS16385	0.31	-1.1
3,605,944	-		LRK53_RS16385	0.31	-0.8
3,605,984	+		LRK53_RS16385	0.38	+0.6
3,605,984	+		LRK53_RS16385	0.38	-1.0
3,605,984	+		LRK53_RS16385	0.38	-0.7
3,605,984	+		LRK53_RS16385	0.38	+0.3
3,605,984	+		LRK53_RS16385	0.38	-0.7
3,605,985	-		LRK53_RS16385	0.38	-0.2
3,605,985	-		LRK53_RS16385	0.38	-1.2
3,606,136	+		LRK53_RS16385	0.63	+1.2
3,606,136	+		LRK53_RS16385	0.63	-1.2
3,606,161	+		LRK53_RS16385	0.67	-1.7
3,606,161	+		LRK53_RS16385	0.67	+0.3
3,606,161	+		LRK53_RS16385	0.67	+0.3
3,606,161	+		LRK53_RS16385	0.67	+0.4
3,606,161	+		LRK53_RS16385	0.67	-0.2
3,606,161	+		LRK53_RS16385	0.67	-1.3
3,606,161	+		LRK53_RS16385	0.67	-0.4
3,606,161	+		LRK53_RS16385	0.67	+0.1
3,606,161	+		LRK53_RS16385	0.67	+2.1
3,606,161	+		LRK53_RS16385	0.67	-1.5
3,606,161	+		LRK53_RS16385	0.67	+0.7
3,606,161	+		LRK53_RS16385	0.67	-1.1
3,606,162	-		LRK53_RS16385	0.68	-1.7
3,606,162	-		LRK53_RS16385	0.68	-0.6
3,606,162	-		LRK53_RS16385	0.68	-1.0
3,606,162	-		LRK53_RS16385	0.68	+0.5
3,606,162	-		LRK53_RS16385	0.68	-2.8
3,606,162	-		LRK53_RS16385	0.68	-3.3
3,606,162	-		LRK53_RS16385	0.68	-1.0
3,606,162	-		LRK53_RS16385	0.68	+0.5
3,606,162	-		LRK53_RS16385	0.68	+1.0
3,606,162	-		LRK53_RS16385	0.68	+0.5
3,606,162	-		LRK53_RS16385	0.68	+0.8
3,606,176	+		LRK53_RS16385	0.70	-0.7
3,606,176	+		LRK53_RS16385	0.70	-0.4
3,606,177	-		LRK53_RS16385	0.70	-1.9
3,606,268	+		LRK53_RS16385	0.85	-0.1
3,606,279	+		LRK53_RS16385	0.87	-0.6
3,606,387	+				-1.2
3,606,511	-				-0.2
3,606,589	+		LRK53_RS16390	0.12	-0.9
3,606,589	+		LRK53_RS16390	0.12	+1.2
3,606,589	+		LRK53_RS16390	0.12	+0.0
3,606,589	+		LRK53_RS16390	0.12	+0.4
3,606,589	+		LRK53_RS16390	0.12	-0.6
3,606,589	+		LRK53_RS16390	0.12	+1.5
3,606,589	+		LRK53_RS16390	0.12	-1.1
3,606,589	+		LRK53_RS16390	0.12	-1.5
3,606,590	-		LRK53_RS16390	0.12	-0.5
3,606,590	-		LRK53_RS16390	0.12	+0.2
3,606,590	-		LRK53_RS16390	0.12	-1.1
3,606,590	-		LRK53_RS16390	0.12	-0.4
3,606,590	-		LRK53_RS16390	0.12	-1.1
3,606,590	-		LRK53_RS16390	0.12	-1.1
3,606,590	-		LRK53_RS16390	0.12	+0.3
3,606,590	-		LRK53_RS16390	0.12	+0.5
3,606,590	-		LRK53_RS16390	0.12	+0.8
3,606,590	-		LRK53_RS16390	0.12	+0.5
3,606,590	-		LRK53_RS16390	0.12	+1.2
3,606,590	-		LRK53_RS16390	0.12	+0.6
3,606,590	-		LRK53_RS16390	0.12	+1.8
3,606,590	-		LRK53_RS16390	0.12	+1.2
3,606,590	-		LRK53_RS16390	0.12	-1.5
3,606,590	-		LRK53_RS16390	0.12	+0.1
3,606,590	-		LRK53_RS16390	0.12	-0.7
3,606,590	-		LRK53_RS16390	0.12	-0.0
3,606,590	-		LRK53_RS16390	0.12	+0.1
3,606,590	-		LRK53_RS16390	0.12	+0.3
3,606,590	-		LRK53_RS16390	0.12	-1.1
3,606,590	-		LRK53_RS16390	0.12	-0.3
3,606,601	+		LRK53_RS16390	0.12	+1.0
3,606,601	+		LRK53_RS16390	0.12	-2.6
3,606,602	-		LRK53_RS16390	0.13	+0.9
3,606,602	-		LRK53_RS16390	0.13	-1.2
3,606,602	-		LRK53_RS16390	0.13	-0.5
3,606,602	-		LRK53_RS16390	0.13	-0.5
3,606,602	-		LRK53_RS16390	0.13	-0.8
3,606,602	-		LRK53_RS16390	0.13	+0.1
3,606,654	+		LRK53_RS16390	0.15	+0.5
3,606,655	-		LRK53_RS16390	0.15	-0.7
3,606,655	-		LRK53_RS16390	0.15	+0.3
3,606,662	+		LRK53_RS16390	0.16	-0.2
3,606,723	+		LRK53_RS16390	0.19	+1.0
3,606,753	+		LRK53_RS16390	0.21	-0.6
3,606,754	-		LRK53_RS16390	0.21	-0.4
3,606,845	+		LRK53_RS16390	0.26	-1.0
3,606,846	-		LRK53_RS16390	0.26	-0.2
3,606,911	+		LRK53_RS16390	0.29	+0.3
3,606,911	+		LRK53_RS16390	0.29	-0.2
3,606,911	+		LRK53_RS16390	0.29	+0.1
3,606,912	-		LRK53_RS16390	0.29	-1.4
3,606,912	-		LRK53_RS16390	0.29	+0.6
3,606,912	-		LRK53_RS16390	0.29	+1.2
3,606,912	-		LRK53_RS16390	0.29	-1.3
3,606,912	-		LRK53_RS16390	0.29	+0.3
3,606,935	+		LRK53_RS16390	0.30	-0.0
3,606,935	+		LRK53_RS16390	0.30	-0.6
3,606,935	+		LRK53_RS16390	0.30	+0.1
3,606,936	-		LRK53_RS16390	0.31	+1.5
3,606,936	-		LRK53_RS16390	0.31	+0.1
3,606,936	-		LRK53_RS16390	0.31	-2.1
3,606,936	-		LRK53_RS16390	0.31	+1.2
3,606,958	+		LRK53_RS16390	0.32	+0.2
3,606,959	-		LRK53_RS16390	0.32	-1.3
3,607,023	+		LRK53_RS16390	0.35	+0.7
3,607,023	+		LRK53_RS16390	0.35	-0.0
3,607,024	-		LRK53_RS16390	0.35	+1.4
3,607,024	-		LRK53_RS16390	0.35	-0.3
3,607,073	+		LRK53_RS16390	0.38	+0.6
3,607,073	+		LRK53_RS16390	0.38	-0.2
3,607,082	+		LRK53_RS16390	0.38	-0.0
3,607,082	+		LRK53_RS16390	0.38	-1.3
3,607,082	+		LRK53_RS16390	0.38	-0.4
3,607,082	+		LRK53_RS16390	0.38	+0.9
3,607,083	-		LRK53_RS16390	0.38	-0.6
3,607,083	-		LRK53_RS16390	0.38	-0.5
3,607,083	-		LRK53_RS16390	0.38	-0.8
3,607,083	-		LRK53_RS16390	0.38	-0.3
3,607,262	+		LRK53_RS16390	0.48	+0.7
3,607,262	+		LRK53_RS16390	0.48	+1.5
3,607,262	+		LRK53_RS16390	0.48	-1.2
3,607,263	-		LRK53_RS16390	0.48	-1.4
3,607,263	-		LRK53_RS16390	0.48	-0.1
3,607,263	-		LRK53_RS16390	0.48	-2.1
3,607,263	-		LRK53_RS16390	0.48	-1.8
3,607,349	+		LRK53_RS16390	0.53	+1.2
3,607,349	+		LRK53_RS16390	0.53	-1.2
3,607,349	+		LRK53_RS16390	0.53	-1.6
3,607,349	+		LRK53_RS16390	0.53	+0.2
3,607,349	+		LRK53_RS16390	0.53	+0.3
3,607,349	+		LRK53_RS16390	0.53	-0.6
3,607,442	+		LRK53_RS16390	0.58	-0.4
3,607,442	+		LRK53_RS16390	0.58	+1.0
3,607,442	+		LRK53_RS16390	0.58	+1.2
3,607,442	+		LRK53_RS16390	0.58	-1.4
3,607,442	+		LRK53_RS16390	0.58	-0.1
3,607,442	+		LRK53_RS16390	0.58	-1.3
3,607,443	-		LRK53_RS16390	0.58	+0.2
3,607,443	-		LRK53_RS16390	0.58	-0.2
3,607,443	-		LRK53_RS16390	0.58	+1.2
3,607,443	-		LRK53_RS16390	0.58	-0.2
3,607,443	-		LRK53_RS16390	0.58	-0.0
3,607,443	-		LRK53_RS16390	0.58	-1.2
3,607,443	-		LRK53_RS16390	0.58	+0.1
3,607,443	-		LRK53_RS16390	0.58	-1.2
3,607,443	-		LRK53_RS16390	0.58	-1.6
3,607,443	-		LRK53_RS16390	0.58	-1.1
3,607,475	+		LRK53_RS16390	0.60	-0.2
3,607,475	+		LRK53_RS16390	0.60	-3.0
3,607,475	+		LRK53_RS16390	0.60	+1.3
3,607,475	+		LRK53_RS16390	0.60	-0.6
3,607,475	+		LRK53_RS16390	0.60	-0.4
3,607,475	+		LRK53_RS16390	0.60	-0.7
3,607,475	+		LRK53_RS16390	0.60	-1.6
3,607,475	+		LRK53_RS16390	0.60	-1.6
3,607,476	-		LRK53_RS16390	0.60	+0.8
3,607,476	-		LRK53_RS16390	0.60	-0.6
3,607,476	-		LRK53_RS16390	0.60	-1.6
3,607,476	-		LRK53_RS16390	0.60	+1.0
3,607,476	-		LRK53_RS16390	0.60	-0.6
3,607,571	+		LRK53_RS16390	0.65	-0.6
3,607,571	+		LRK53_RS16390	0.65	-0.4
3,607,733	+		LRK53_RS16390	0.74	+0.1
3,607,839	+		LRK53_RS16390	0.79	-1.0
3,607,839	+		LRK53_RS16390	0.79	-1.0
3,607,840	-		LRK53_RS16390	0.79	-0.9
3,607,840	-		LRK53_RS16390	0.79	-0.3
3,607,847	+		LRK53_RS16390	0.80	-1.6
3,607,847	+		LRK53_RS16390	0.80	-1.5
3,607,848	-		LRK53_RS16390	0.80	-0.5
3,607,885	+		LRK53_RS16390	0.82	-0.7
3,607,885	+		LRK53_RS16390	0.82	+1.0
3,607,886	-		LRK53_RS16390	0.82	-0.7
3,607,886	-		LRK53_RS16390	0.82	+0.7
3,607,928	+		LRK53_RS16390	0.84	+0.2
3,607,928	+		LRK53_RS16390	0.84	-0.6
3,607,928	+		LRK53_RS16390	0.84	+0.8
3,607,928	+		LRK53_RS16390	0.84	-1.5
3,607,928	+		LRK53_RS16390	0.84	+0.4
3,607,928	+		LRK53_RS16390	0.84	-0.6
3,607,928	+		LRK53_RS16390	0.84	-0.2
3,607,928	+		LRK53_RS16390	0.84	-1.7
3,607,928	+		LRK53_RS16390	0.84	-3.1
3,607,928	+		LRK53_RS16390	0.84	+1.2
3,607,928	+		LRK53_RS16390	0.84	-1.0
3,607,929	-		LRK53_RS16390	0.84	-1.9
3,607,929	-		LRK53_RS16390	0.84	-1.4
3,607,929	-		LRK53_RS16390	0.84	+0.8
3,607,929	-		LRK53_RS16390	0.84	-0.6
3,607,929	-		LRK53_RS16390	0.84	-1.5
3,607,929	-		LRK53_RS16390	0.84	-1.4
3,607,929	-		LRK53_RS16390	0.84	-2.3
3,607,929	-		LRK53_RS16390	0.84	-0.7
3,607,948	+		LRK53_RS16390	0.85	-1.5
3,607,948	+		LRK53_RS16390	0.85	+0.8
3,607,948	+		LRK53_RS16390	0.85	-1.3
3,607,948	+		LRK53_RS16390	0.85	-1.3
3,607,948	+		LRK53_RS16390	0.85	+0.9
3,607,948	+		LRK53_RS16390	0.85	+0.4
3,607,948	+		LRK53_RS16390	0.85	-1.2
3,607,949	-		LRK53_RS16390	0.85	-0.8
3,607,949	-		LRK53_RS16390	0.85	-0.4
3,607,949	-		LRK53_RS16390	0.85	-0.5
3,607,949	-		LRK53_RS16390	0.85	-0.5
3,607,949	-		LRK53_RS16390	0.85	-0.4
3,607,949	-		LRK53_RS16390	0.85	-1.2
3,607,968	+		LRK53_RS16390	0.86	-2.0
3,607,968	+		LRK53_RS16390	0.86	-0.2
3,607,968	+		LRK53_RS16390	0.86	+0.1
3,607,968	+		LRK53_RS16390	0.86	-1.4
3,607,969	-		LRK53_RS16390	0.86	+0.3
3,607,976	+		LRK53_RS16390	0.87	-0.0
3,607,976	+		LRK53_RS16390	0.87	-1.4
3,607,976	+		LRK53_RS16390	0.87	+0.4
3,607,976	+		LRK53_RS16390	0.87	-0.3
3,607,998	+		LRK53_RS16390	0.88	-0.4
3,608,104	+				-1.1
3,608,104	+				-1.0
3,608,105	-				-0.8
3,608,109	+				-1.5
3,608,211	+				+0.4
3,608,211	+				+0.4
3,608,211	+				-0.6
3,608,211	+				-0.2
3,608,211	+				+1.9
3,608,211	+				+1.8
3,608,211	+				-1.2
3,608,212	-				-0.7
3,608,212	-				-1.7
3,608,212	-				-0.7
3,608,212	-				-0.3
3,608,380	+				-1.2
3,608,380	+				+0.3
3,608,381	-				+0.0
3,608,395	+				-1.0
3,608,395	+				-0.2
3,608,395	+				-0.5
3,608,395	+				-1.4
3,608,395	+				-0.6
3,608,396	-				-1.6
3,608,396	-				-2.1
3,608,396	-				-0.6
3,608,396	-				-1.5
3,608,396	-				-1.0
3,608,413	+				-0.6
3,608,413	+				+0.7
3,608,413	+				+0.4
3,608,413	+				-0.9
3,608,413	+				-2.3
3,608,413	+				-1.7
3,608,413	+				+1.2
3,608,413	+				+1.2
3,608,413	+				-0.9
3,608,413	+				-0.3
3,608,413	+				+0.2
3,608,414	-				-0.1
3,608,414	-				-1.7
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3,608,414	-				+0.1
3,608,414	-				-1.5
3,608,414	-				-0.7
3,608,414	-				-1.8
3,608,828	+		LRK53_RS16395	0.29	-0.2
3,608,848	+		LRK53_RS16395	0.30	-1.9
3,608,849	-		LRK53_RS16395	0.30	-0.0
3,608,849	-		LRK53_RS16395	0.30	-1.3
3,608,849	-		LRK53_RS16395	0.30	-0.7
3,608,975	-		LRK53_RS16395	0.36	-0.2
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3,609,010	+		LRK53_RS16395	0.38	+0.1
3,609,010	+		LRK53_RS16395	0.38	+0.7
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3,609,011	-		LRK53_RS16395	0.38	+1.0
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3,609,066	-		LRK53_RS16395	0.41	+0.7
3,609,066	-		LRK53_RS16395	0.41	+2.0
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3,609,165	+		LRK53_RS16395	0.46	-1.2
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3,609,166	-		LRK53_RS16395	0.46	-1.5
3,609,166	-		LRK53_RS16395	0.46	-2.3
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3,609,166	-		LRK53_RS16395	0.46	-1.1
3,609,166	-		LRK53_RS16395	0.46	-1.3
3,609,166	-		LRK53_RS16395	0.46	-1.8
3,609,166	-		LRK53_RS16395	0.46	+0.0
3,609,166	-		LRK53_RS16395	0.46	+3.2
3,609,166	-		LRK53_RS16395	0.46	-1.6
3,609,166	-		LRK53_RS16395	0.46	-0.0
3,609,197	+		LRK53_RS16395	0.47	-1.4
3,609,198	-		LRK53_RS16395	0.47	-0.7
3,609,211	+		LRK53_RS16395	0.48	+2.0
3,609,212	-		LRK53_RS16395	0.48	-0.4