Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS09825

Experiment: planktonic; Day1; NLDM; Aluminum chloride 1mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	planktonic; Day1; NLDM; Aluminum chloride 1mM
2,204,518	+				-0.1
2,204,519	-				-1.7
2,204,519	-				-0.2
2,204,605	+				-1.0
2,204,605	+				-1.6
2,204,606	-				+0.2
2,204,695	+		LRK53_RS09820	0.11	-1.1
2,204,695	+		LRK53_RS09820	0.11	+0.1
2,204,696	-		LRK53_RS09820	0.11	+0.4
2,204,696	-		LRK53_RS09820	0.11	-0.9
2,204,696	-		LRK53_RS09820	0.11	-1.0
2,204,733	+		LRK53_RS09820	0.22	-0.5
2,204,733	+		LRK53_RS09820	0.22	-0.9
2,204,733	+		LRK53_RS09820	0.22	-2.6
2,204,733	+		LRK53_RS09820	0.22	+0.1
2,204,733	+		LRK53_RS09820	0.22	-1.6
2,204,733	+		LRK53_RS09820	0.22	+0.3
2,204,733	+		LRK53_RS09820	0.22	-1.0
2,204,734	-		LRK53_RS09820	0.22	-1.3
2,204,734	-		LRK53_RS09820	0.22	-0.7
2,204,734	-		LRK53_RS09820	0.22	-1.0
2,204,734	-		LRK53_RS09820	0.22	-1.1
2,204,734	-		LRK53_RS09820	0.22	-1.1
2,204,734	-		LRK53_RS09820	0.22	+0.1
2,204,734	-		LRK53_RS09820	0.22	-1.2
2,204,751	+		LRK53_RS09820	0.27	-0.7
2,204,751	+		LRK53_RS09820	0.27	-1.8
2,204,752	-		LRK53_RS09820	0.27	-0.9
2,204,752	-		LRK53_RS09820	0.27	-2.1
2,204,752	-		LRK53_RS09820	0.27	-0.7
2,205,020	+				+0.0
2,205,020	+				-0.3
2,205,021	-				-0.9
2,205,021	-				-0.0
2,205,021	-				-1.5
2,205,021	-				-0.5
2,205,037	+				-2.1
2,205,037	+				-0.7
2,205,037	+				-0.8
2,205,037	+				-0.6
2,205,037	+				-1.4
2,205,037	+				-0.8
2,205,037	+				-0.6
2,205,037	+				-1.1
2,205,037	+				-1.1
2,205,037	+				+0.3
2,205,037	+				-0.0
2,205,037	+				+0.4
2,205,037	+				+0.3
2,205,037	+				+0.1
2,205,037	+				-1.2
2,205,037	+				-2.2
2,205,038	-				-0.8
2,205,038	-				+0.2
2,205,038	-				+0.1
2,205,038	-				-0.5
2,205,038	-				+0.1
2,205,038	-				-0.0
2,205,038	-				-1.2
2,205,038	-				-0.7
2,205,038	-				-2.0
2,205,038	-				-1.0
2,205,038	-				-2.2
2,205,038	-				-0.7
2,205,038	-				-0.2
2,205,047	+				-0.6
2,205,047	+				-1.5
2,205,048	-				-0.7
2,205,048	-				-0.0
2,205,062	+				-1.0
2,205,062	+				-1.5
2,205,062	+				-1.4
2,205,063	-				-0.0
2,205,176	-				-0.9
2,205,473	+		LRK53_RS09825	0.13	-1.4
2,205,473	+		LRK53_RS09825	0.13	-0.2
2,205,473	+		LRK53_RS09825	0.13	-0.8
2,205,474	-		LRK53_RS09825	0.13	-1.5
2,205,474	-		LRK53_RS09825	0.13	-1.7
2,205,474	-		LRK53_RS09825	0.13	-1.6
2,205,474	-		LRK53_RS09825	0.13	-2.4
2,205,474	-		LRK53_RS09825	0.13	-0.3
2,205,593	+		LRK53_RS09825	0.19	+0.0
2,205,783	+		LRK53_RS09825	0.29	-1.1
2,205,783	+		LRK53_RS09825	0.29	-1.5
2,205,783	+		LRK53_RS09825	0.29	+1.4
2,205,783	+		LRK53_RS09825	0.29	+0.2
2,205,783	+		LRK53_RS09825	0.29	+0.2
2,205,783	+		LRK53_RS09825	0.29	+1.5
2,205,783	+		LRK53_RS09825	0.29	-1.2
2,205,783	+		LRK53_RS09825	0.29	-3.0
2,205,784	-		LRK53_RS09825	0.29	-1.4
2,205,784	-		LRK53_RS09825	0.29	-0.7
2,205,814	-		LRK53_RS09825	0.30	+1.8
2,205,905	+		LRK53_RS09825	0.35	-2.0
2,205,905	+		LRK53_RS09825	0.35	-1.3
2,205,905	+		LRK53_RS09825	0.35	-0.4
2,205,905	+		LRK53_RS09825	0.35	-1.7
2,205,905	+		LRK53_RS09825	0.35	-1.0
2,205,905	+		LRK53_RS09825	0.35	-0.5
2,205,905	+		LRK53_RS09825	0.35	-0.1
2,205,905	+		LRK53_RS09825	0.35	+0.5
2,205,905	+		LRK53_RS09825	0.35	-1.9
2,205,905	+		LRK53_RS09825	0.35	-0.4
2,205,905	+		LRK53_RS09825	0.35	-0.9
2,205,905	+		LRK53_RS09825	0.35	+1.0
2,205,905	+		LRK53_RS09825	0.35	-0.6
2,205,905	+		LRK53_RS09825	0.35	-1.5
2,205,905	+		LRK53_RS09825	0.35	-0.7
2,205,905	+		LRK53_RS09825	0.35	+2.0
2,205,905	+		LRK53_RS09825	0.35	+0.8
2,205,905	+		LRK53_RS09825	0.35	-1.0
2,205,905	+		LRK53_RS09825	0.35	-0.9
2,205,905	+		LRK53_RS09825	0.35	-0.5
2,205,905	+		LRK53_RS09825	0.35	-2.3
2,205,905	+		LRK53_RS09825	0.35	+0.2
2,205,906	-		LRK53_RS09825	0.35	+0.3
2,205,906	-		LRK53_RS09825	0.35	-1.9
2,205,906	-		LRK53_RS09825	0.35	-0.2
2,205,906	-		LRK53_RS09825	0.35	-0.4
2,205,906	-		LRK53_RS09825	0.35	-0.3
2,205,906	-		LRK53_RS09825	0.35	-0.7
2,205,906	-		LRK53_RS09825	0.35	-2.0
2,205,906	-		LRK53_RS09825	0.35	-1.4
2,205,906	-		LRK53_RS09825	0.35	-0.9
2,205,906	-		LRK53_RS09825	0.35	-1.0
2,205,906	-		LRK53_RS09825	0.35	-0.6
2,205,906	-		LRK53_RS09825	0.35	-0.9
2,205,906	-		LRK53_RS09825	0.35	-2.4
2,205,906	-		LRK53_RS09825	0.35	+0.9
2,205,906	-		LRK53_RS09825	0.35	-2.5
2,205,906	-		LRK53_RS09825	0.35	-1.7
2,205,906	-		LRK53_RS09825	0.35	+0.9
2,205,906	-		LRK53_RS09825	0.35	-2.0
2,205,906	-		LRK53_RS09825	0.35	-0.5
2,205,906	-		LRK53_RS09825	0.35	-2.4
2,205,906	-		LRK53_RS09825	0.35	-0.4
2,205,906	-		LRK53_RS09825	0.35	-0.7
2,205,907	+		LRK53_RS09825	0.35	-1.2
2,205,907	+		LRK53_RS09825	0.35	+0.7
2,205,917	+		LRK53_RS09825	0.36	-1.1
2,205,917	+		LRK53_RS09825	0.36	-1.1
2,205,917	+		LRK53_RS09825	0.36	+0.0
2,205,917	+		LRK53_RS09825	0.36	+0.5
2,205,917	+		LRK53_RS09825	0.36	+2.3
2,205,917	+		LRK53_RS09825	0.36	-1.2
2,205,918	-		LRK53_RS09825	0.36	+1.1
2,205,918	-		LRK53_RS09825	0.36	-0.4
2,205,918	-		LRK53_RS09825	0.36	-2.0
2,205,918	-		LRK53_RS09825	0.36	-1.6
2,206,190	+		LRK53_RS09825	0.50	+0.6
2,206,392	-		LRK53_RS09825	0.60	-1.0
2,206,800	-		LRK53_RS09825	0.82	-0.4
2,206,800	-		LRK53_RS09825	0.82	-0.0
2,206,960	-		LRK53_RS09825	0.90	-2.9
2,207,039	+				-0.8
2,207,039	+				-0.4
2,207,039	+				-1.1
2,207,039	+				-0.5
2,207,039	+				-2.3
2,207,039	+				-1.4
2,207,039	+				-0.7
2,207,039	+				-0.4
2,207,039	+				-1.3
2,207,039	+				-0.7
2,207,039	+				-0.8
2,207,040	-				+0.5
2,207,040	-				-2.4
2,207,040	-				-1.2
2,207,040	-				-2.7
2,207,040	-				+0.2
2,207,280	+		LRK53_RS09830	0.13	-0.2
2,207,281	-		LRK53_RS09830	0.13	-0.7
2,207,281	-		LRK53_RS09830	0.13	-0.2
2,207,281	-		LRK53_RS09830	0.13	-1.2
2,207,281	-		LRK53_RS09830	0.13	+1.5
2,207,281	-		LRK53_RS09830	0.13	+1.8
2,207,302	-		LRK53_RS09830	0.15	-0.9
2,207,302	-		LRK53_RS09830	0.15	-0.8
2,207,407	+		LRK53_RS09830	0.27	+0.5
2,207,407	+		LRK53_RS09830	0.27	-0.9
2,207,407	+		LRK53_RS09830	0.27	-0.8
2,207,407	+		LRK53_RS09830	0.27	+0.9
2,207,407	+		LRK53_RS09830	0.27	+0.6
2,207,407	+		LRK53_RS09830	0.27	-0.2
2,207,408	-		LRK53_RS09830	0.27	-1.0
2,207,574	-		LRK53_RS09830	0.45	+1.2