Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS06980

Experiment: planktonic; Day1; NLDM; Aluminum chloride 1mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	planktonic; Day1; NLDM; Aluminum chloride 1mM
1,572,007	+		LRK53_RS06970	0.49	-1.0
1,572,007	+		LRK53_RS06970	0.49	+0.3
1,572,007	+		LRK53_RS06970	0.49	-0.7
1,572,007	+		LRK53_RS06970	0.49	-1.8
1,572,007	+		LRK53_RS06970	0.49	-0.1
1,572,007	+		LRK53_RS06970	0.49	-1.3
1,572,008	-		LRK53_RS06970	0.50	-0.7
1,572,008	-		LRK53_RS06970	0.50	-0.4
1,572,008	-		LRK53_RS06970	0.50	-0.1
1,572,008	-		LRK53_RS06970	0.50	-1.9
1,572,008	-		LRK53_RS06970	0.50	-2.3
1,572,008	-		LRK53_RS06970	0.50	-0.3
1,572,008	-		LRK53_RS06970	0.50	-1.4
1,572,008	-		LRK53_RS06970	0.50	-0.1
1,572,111	+				-1.7
1,572,111	+				-2.0
1,572,111	+				-1.6
1,572,111	+				-0.6
1,572,112	-				-0.9
1,572,112	-				-1.1
1,572,112	-				-0.2
1,572,112	-				-0.4
1,572,112	-				-1.1
1,572,145	+				-0.8
1,572,145	+				-1.1
1,572,145	+				-1.4
1,572,145	+				-0.6
1,572,145	+				-2.3
1,572,145	+				+0.2
1,572,145	+				+0.3
1,572,145	+				-0.5
1,572,145	+				-0.1
1,572,145	+				-0.1
1,572,145	+				+0.4
1,572,145	+				+0.3
1,572,145	+				-1.1
1,572,145	+				-0.8
1,572,145	+				-1.6
1,572,145	+				-1.0
1,572,145	+				+0.1
1,572,145	+				+0.1
1,572,145	+				+0.1
1,572,145	+				-0.9
1,572,145	+				-0.7
1,572,145	+				-0.9
1,572,145	+				-0.8
1,572,145	+				+1.1
1,572,145	+				-1.3
1,572,145	+				-1.7
1,572,145	+				-2.2
1,572,145	+				-1.2
1,572,146	-				-1.1
1,572,146	-				-2.0
1,572,146	-				-1.1
1,572,146	-				-1.7
1,572,146	-				-0.8
1,572,146	-				-1.8
1,572,146	-				-2.6
1,572,146	-				-1.9
1,572,146	-				+1.0
1,572,146	-				-0.1
1,572,146	-				+0.9
1,572,146	-				-0.2
1,572,146	-				-0.8
1,572,146	-				+0.1
1,572,146	-				-1.5
1,572,146	-				-3.0
1,572,146	-				-0.0
1,572,146	-				+0.3
1,572,146	-				-0.3
1,572,146	-				-1.3
1,572,146	-				+0.2
1,572,146	-				-0.4
1,572,146	-				-0.5
1,572,146	-				-0.4
1,572,146	-				-1.2
1,572,146	-				-1.0
1,572,146	-				-0.4
1,572,146	-				-1.3
1,572,146	-				-0.5
1,572,146	-				-1.5
1,572,229	+				+0.2
1,572,229	+				-0.2
1,572,229	+				-1.7
1,572,229	+				+1.3
1,572,229	+				-2.1
1,572,229	+				-1.1
1,572,229	+				-1.7
1,572,229	+				-0.6
1,572,229	+				-0.6
1,572,229	+				-0.2
1,572,229	+				-1.1
1,572,229	+				-0.4
1,572,230	-				-1.9
1,572,230	-				-0.1
1,572,230	-				-1.4
1,572,230	-				+0.7
1,572,230	-				-0.1
1,572,230	-				-0.8
1,572,230	-				+0.9
1,572,230	-				-3.1
1,572,230	-				+0.3
1,572,230	-				-1.5
1,572,230	-				-1.2
1,572,230	-				-1.1
1,572,230	-				+0.3
1,572,230	-				+0.3
1,572,230	-				+0.1
1,572,407	+				+0.9
1,572,407	+				-0.1
1,572,408	-				-0.6
1,572,408	-				-2.2
1,572,414	+				-0.3
1,572,414	+				-1.3
1,572,447	+				-0.6
1,572,447	+				+1.1
1,572,447	+				-0.9
1,572,448	-				-1.1
1,572,448	-				-1.7
1,572,448	-				+0.3
1,572,454	+				-2.1
1,572,454	+				-2.3
1,572,454	+				-2.7
1,572,515	+				-0.6
1,572,516	-				-0.2
1,572,517	+				-1.4
1,572,517	+				-0.8
1,572,524	+				-0.8
1,572,525	-				-1.1
1,572,525	-				-1.0
1,572,525	-				+0.1
1,572,536	-		LRK53_RS06975	0.11	-1.5
1,572,559	-		LRK53_RS06975	0.16	-0.3
1,572,569	-		LRK53_RS06975	0.18	+1.0
1,572,590	+		LRK53_RS06975	0.22	-1.7
1,572,591	-		LRK53_RS06975	0.22	-0.4
1,572,726	+		LRK53_RS06975	0.49	-1.4
1,572,727	-		LRK53_RS06975	0.49	-1.7
1,572,745	-		LRK53_RS06975	0.52	-0.7
1,572,780	-		LRK53_RS06975	0.59	-0.5
1,572,783	+		LRK53_RS06975	0.60	+0.1
1,572,783	+		LRK53_RS06975	0.60	+0.7
1,572,783	+		LRK53_RS06975	0.60	+0.2
1,572,784	-		LRK53_RS06975	0.60	-1.1
1,572,784	-		LRK53_RS06975	0.60	-0.5
1,572,784	-		LRK53_RS06975	0.60	-0.7
1,572,784	-		LRK53_RS06975	0.60	-0.0
1,572,784	-		LRK53_RS06975	0.60	+0.6
1,572,784	-		LRK53_RS06975	0.60	-2.1
1,572,784	-		LRK53_RS06975	0.60	-0.3
1,572,788	+		LRK53_RS06975	0.61	+0.9
1,572,789	-		LRK53_RS06975	0.61	-1.9
1,572,789	-		LRK53_RS06975	0.61	-1.2
1,572,789	-		LRK53_RS06975	0.61	-1.6
1,572,834	-		LRK53_RS06975	0.70	-1.5
1,572,855	+		LRK53_RS06975	0.74	-0.4
1,572,864	+		LRK53_RS06975	0.76	-0.3
1,572,889	+		LRK53_RS06975	0.81	-1.4
1,572,921	+		LRK53_RS06975	0.87	-1.4
1,572,922	-		LRK53_RS06975	0.87	-1.4
1,572,969	+				-0.2
1,572,975	+				-2.0
1,573,014	+				-2.3
1,573,112	+		LRK53_RS06980	0.40	-0.3
1,573,112	+		LRK53_RS06980	0.40	-0.4
1,573,114	+		LRK53_RS06980	0.40	-1.8
1,573,144	+		LRK53_RS06980	0.50	-1.2
1,573,145	-		LRK53_RS06980	0.50	-0.8
1,573,145	-		LRK53_RS06980	0.50	-0.8
1,573,145	-		LRK53_RS06980	0.50	-0.6
1,573,178	-		LRK53_RS06980	0.60	-1.6
1,573,188	-		LRK53_RS06980	0.64	-1.4
1,573,188	-		LRK53_RS06980	0.64	-1.3
1,573,189	+		LRK53_RS06980	0.64	-1.8
1,573,232	+		LRK53_RS06980	0.77	-1.2
1,573,232	+		LRK53_RS06980	0.77	-0.2
1,573,235	+		LRK53_RS06980	0.78	-0.3
1,573,236	-		LRK53_RS06980	0.79	-1.5
1,573,236	-		LRK53_RS06980	0.79	-0.1
1,573,250	+		LRK53_RS06980	0.83	-0.3
1,573,251	-		LRK53_RS06980	0.83	-0.3
1,573,251	-		LRK53_RS06980	0.83	+0.2
1,573,253	-		LRK53_RS06980	0.84	+0.4
1,573,253	-		LRK53_RS06980	0.84	-1.6
1,573,253	-		LRK53_RS06980	0.84	+0.2
1,573,253	-		LRK53_RS06980	0.84	-0.4
1,573,253	-		LRK53_RS06980	0.84	-0.2
1,573,278	-				-0.2
1,573,311	+				-1.7
1,573,312	-				+0.4
1,573,312	-				-0.7
1,573,312	-				-0.3
1,573,316	+				-1.1
1,573,316	+				+0.3
1,573,316	+				-0.9
1,573,316	+				-1.1
1,573,317	-				-1.4
1,573,317	-				+0.4
1,573,340	-				-1.3
1,573,345	+				-0.6
1,573,358	+				-0.4
1,573,359	-				-0.1
1,573,408	+				-0.3
1,573,408	+				-2.0
1,573,408	+				-0.4
1,573,408	+				-0.9
1,573,409	-				-1.4
1,573,409	-				+0.1
1,573,409	-				-2.6
1,573,488	+				-0.1
1,573,489	-				+0.3
1,573,619	+		LRK53_RS06985	0.14	-0.7
1,573,619	+		LRK53_RS06985	0.14	-0.6
1,573,619	+		LRK53_RS06985	0.14	+0.1
1,573,631	+		LRK53_RS06985	0.15	-1.2
1,573,631	+		LRK53_RS06985	0.15	-2.9
1,573,631	+		LRK53_RS06985	0.15	-1.4
1,573,631	+		LRK53_RS06985	0.15	+0.7
1,573,631	+		LRK53_RS06985	0.15	-1.0
1,573,631	+		LRK53_RS06985	0.15	-1.2
1,573,655	+		LRK53_RS06985	0.18	-2.5
1,573,655	+		LRK53_RS06985	0.18	-1.8
1,573,655	+		LRK53_RS06985	0.18	-2.0
1,573,655	+		LRK53_RS06985	0.18	+0.2
1,573,656	-		LRK53_RS06985	0.18	-0.6
1,573,798	+		LRK53_RS06985	0.33	-0.3
1,573,798	+		LRK53_RS06985	0.33	-1.2
1,573,798	+		LRK53_RS06985	0.33	-1.5
1,573,799	-		LRK53_RS06985	0.33	-2.5
1,573,799	-		LRK53_RS06985	0.33	-0.4
1,574,003	+		LRK53_RS06985	0.54	-2.4
1,574,003	+		LRK53_RS06985	0.54	-0.8
1,574,003	+		LRK53_RS06985	0.54	-0.2
1,574,003	+		LRK53_RS06985	0.54	-0.8
1,574,003	+		LRK53_RS06985	0.54	-0.1
1,574,003	+		LRK53_RS06985	0.54	-1.6
1,574,004	-		LRK53_RS06985	0.54	-0.6
1,574,004	-		LRK53_RS06985	0.54	-1.8
1,574,102	+		LRK53_RS06985	0.64	-0.9
1,574,102	+		LRK53_RS06985	0.64	-0.3
1,574,102	+		LRK53_RS06985	0.64	+2.7
1,574,102	+		LRK53_RS06985	0.64	-1.6
1,574,102	+		LRK53_RS06985	0.64	-1.7
1,574,102	+		LRK53_RS06985	0.64	-0.1
1,574,103	-		LRK53_RS06985	0.64	-0.9
1,574,103	-		LRK53_RS06985	0.64	-1.4
1,574,265	-		LRK53_RS06985	0.81	-0.0
1,574,265	-		LRK53_RS06985	0.81	-0.8
1,574,267	+		LRK53_RS06985	0.81	-2.3
1,574,267	+		LRK53_RS06985	0.81	-2.1
1,574,267	+		LRK53_RS06985	0.81	-0.9
1,574,267	+		LRK53_RS06985	0.81	-1.9
1,574,267	+		LRK53_RS06985	0.81	-2.0
1,574,267	+		LRK53_RS06985	0.81	-0.7
1,574,268	-		LRK53_RS06985	0.82	-1.1
1,574,268	-		LRK53_RS06985	0.82	+0.3
1,574,268	-		LRK53_RS06985	0.82	-0.3
1,574,268	-		LRK53_RS06985	0.82	-0.7
1,574,268	-		LRK53_RS06985	0.82	-2.7